File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 426ms, 86.94% of 490ms total Dropped 219 nodes (cum <= 2.45ms) flat flat% sum% cum cum% 0 0% 0% 480ms 97.96% __libc_start_call_main 0 0% 0% 480ms 97.96% __libc_start_main_impl 0 0% 0% 480ms 97.96% _start 0 0% 0% 477ms 97.35% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 477ms 97.35% CxxTest::TestRunner::runAllTests 0 0% 0% 477ms 97.35% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 477ms 97.35% main 0 0% 0% 431ms 87.96% CxxTest::RealTestDescription::run 0 0% 0% 431ms 87.96% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 431ms 87.96% CxxTest::TestRunner::runTest (inline) 0 0% 0% 431ms 87.96% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 431ms 87.96% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 426ms 86.94% AbstractCardiacProblem::Solve 0 0% 0% 425ms 86.73% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 381ms 77.76% KSPSolve 0 0% 0% 381ms 77.76% KSPSolve_Private 0 0% 0% 381ms 77.76% LinearSystem::Solve 3ms 0.61% 0.61% 380ms 77.55% KSPSolve_CG 0 0% 0.61% 225ms 45.92% KSP_PCApply.lto_priv.7 0 0% 0.61% 218ms 44.49% PCApply 0 0% 0.61% 218ms 44.49% PCApply_BJacobi_Singleblock 1ms 0.2% 0.82% 192ms 39.18% KSPSolve_PREONLY (partial-inline) 0 0% 0.82% 178ms 36.33% MatSolve 176ms 35.92% 36.73% 178ms 36.33% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 36.73% 178ms 36.33% PCApply_ICC 0 0% 36.73% 67ms 13.67% MatMult 0 0% 36.73% 67ms 13.67% MatMult_SeqAIJ 67ms 13.67% 50.41% 67ms 13.67% MatMult_SeqAIJ_Inode (inline) 53ms 10.82% 61.22% 53ms 10.82% ddot_ 0 0% 61.22% 42ms 8.57% CxxTest::RealWorldDescription::setUp 0 0% 61.22% 42ms 8.57% PMPI_Init_thread 0 0% 61.22% 42ms 8.57% PetscInitialize 0 0% 61.22% 42ms 8.57% PetscSetup::setUpWorld 0 0% 61.22% 42ms 8.57% PetscSetupUtils::CommonSetup 0 0% 61.22% 42ms 8.57% PetscSetupUtils::InitialisePetsc 0 0% 61.22% 42ms 8.57% ompi_mpi_init 0 0% 61.22% 36ms 7.35% AbstractCardiacTissue::SolveCellSystems 0 0% 61.22% 36ms 7.35% VecTDot 0 0% 61.22% 36ms 7.35% VecTDot_Seq 1ms 0.2% 61.43% 36ms 7.35% VecXDot_Seq_Private.constprop.0 2ms 0.41% 61.84% 35ms 7.14% 2ms 0.41% 62.24% 34ms 6.94% MatNullSpaceRemove 0 0% 62.24% 25ms 5.10% orte_init 1ms 0.2% 62.45% 21ms 4.29% AbstractCardiacCell::ComputeExceptVoltage 0 0% 62.45% 21ms 4.29% __GI__dl_catch_exception 0 0% 62.45% 21ms 4.29% _dl_catch_error 0 0% 62.45% 21ms 4.29% _dlerror_run 0 0% 62.45% 21ms 4.29% opal_stackframe_output 1ms 0.2% 62.65% 20ms 4.08% VecNorm 1ms 0.2% 62.86% 19ms 3.88% VecNorm_Seq 0 0% 62.86% 19ms 3.88% mca_base_framework_open 0 0% 62.86% 17ms 3.47% KSP_PCApply (partial-inline) 0 0% 62.86% 17ms 3.47% VecMAXPY 17ms 3.47% 66.33% 17ms 3.47% VecMAXPY_Seq 0 0% 66.33% 17ms 3.47% mca_base_framework_register 0 0% 66.33% 16ms 3.27% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 66.33% 16ms 3.27% ___dlopen 0 0% 66.33% 16ms 3.27% _dl_open 0 0% 66.33% 16ms 3.27% dl_open_worker 0 0% 66.33% 16ms 3.27% dlopen_doit 0 0% 66.33% 16ms 3.27% dlopen_implementation (inline) 0 0% 66.33% 16ms 3.27% hwloc_topology_load 0 0% 66.33% 16ms 3.27% mca_base_component_find 0 0% 66.33% 16ms 3.27% mca_base_component_repository_open 0 0% 66.33% 16ms 3.27% mca_base_framework_components_register 0 0% 66.33% 15ms 3.06% VecMDot 15ms 3.06% 69.39% 15ms 3.06% VecMDot_Seq 0 0% 69.39% 15ms 3.06% VecMXDot_Private 0 0% 69.39% 15ms 3.06% hwloc_linux_get_tid_last_cpu_location 1ms 0.2% 69.59% 14ms 2.86% EulerIvpOdeSolver::CalculateNextYValue 2ms 0.41% 70.00% 14ms 2.86% VecAXPY 0 0% 70.00% 14ms 2.86% _dl_init 0 0% 70.00% 14ms 2.86% call_init (inline) 3ms 0.61% 70.61% 13ms 2.65% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 70.61% 12ms 2.45% AbstractCardiacTissue::UpdateCaches (inline) 1ms 0.2% 70.82% 12ms 2.45% VecAXPY_Seq 3ms 0.61% 71.43% 11ms 2.24% CellLuoRudy1991FromCellML::GetIIonic 0 0% 71.43% 11ms 2.24% VecAYPX 11ms 2.24% 73.67% 11ms 2.24% VecAYPX_Seq 11ms 2.24% 75.92% 11ms 2.24% daxpy_ 0 0% 75.92% 11ms 2.24% dl_open_worker_begin 7ms 1.43% 77.35% 9ms 1.84% __GI___exp 0 0% 77.35% 9ms 1.84% _dl_start_user 2ms 0.41% 77.76% 8ms 1.63% __GI___libc_malloc 0 0% 77.76% 8ms 1.63% _dl_lookup_symbol_x 0 0% 77.76% 8ms 1.63% mca_base_framework_components_open 0 0% 77.76% 8ms 1.63% mca_topo_base_dist_graph_neighbors_count 3ms 0.61% 78.37% 7ms 1.43% BidomainSolver::SetupLinearSystem 0 0% 78.37% 7ms 1.43% VecDuplicate 1ms 0.2% 78.57% 7ms 1.43% VecDuplicate_Seq 6ms 1.22% 79.80% 7ms 1.43% do_lookup_x 0 0% 79.80% 6ms 1.22% PetscMallocA 0 0% 79.80% 6ms 1.22% PetscMallocAlign 0 0% 79.80% 6ms 1.22% __posix_memalign 0 0% 79.80% 6ms 1.22% _dl_map_object 1ms 0.2% 80.00% 6ms 1.22% boost::serialization::singleton::get_instance 0 0% 80.00% 6ms 1.22% opal_hwloc_base_get_topology 0 0% 80.00% 6ms 1.22% orte_ess_base_proc_binding 5ms 1.02% 81.02% 5ms 1.02% [libchaste_heart.so] 2ms 0.41% 81.43% 5ms 1.02% __cxa_finalize 0 0% 81.43% 5ms 1.02% __dlclose 0 0% 81.43% 5ms 1.02% _dl_call_fini 0 0% 81.43% 5ms 1.02% _dl_close 2ms 0.41% 81.84% 5ms 1.02% _dl_close_worker (inline) 1ms 0.2% 82.04% 5ms 1.02% _dl_runtime_resolve_xsavec 4ms 0.82% 82.86% 5ms 1.02% _int_malloc 0 0% 82.86% 5ms 1.02% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 82.86% 5ms 1.02% mca_base_component_repository_release 0 0% 82.86% 4ms 0.82% AbstractCardiacProblem::Initialise 0 0% 82.86% 4ms 0.82% CxxTest::RealWorldDescription::tearDown 0 0% 82.86% 4ms 0.82% KSPConvergedDefault 0 0% 82.86% 4ms 0.82% PetscFinalize 0 0% 82.86% 4ms 0.82% PetscMemcpy (inline) 0 0% 82.86% 4ms 0.82% PetscSetup::tearDownWorld 0 0% 82.86% 4ms 0.82% PetscSetupUtils::CommonFinalize 4ms 0.82% 83.67% 4ms 0.82% __GI___clock_nanosleep 0 0% 83.67% 4ms 0.82% __GI___nanosleep 4ms 0.82% 84.49% 4ms 0.82% __memcpy_avx_unaligned_erms 1ms 0.2% 84.69% 4ms 0.82% __pow 0 0% 84.69% 4ms 0.82% _dl_fixup 0 0% 84.69% 4ms 0.82% _dl_map_object_from_fd 0 0% 84.69% 4ms 0.82% _dl_open_relocate_one_object (inline) 0 0% 84.69% 4ms 0.82% _dl_relocate_object 0 0% 84.69% 4ms 0.82% elf_dynamic_do_Rela (inline) 0 0% 84.69% 4ms 0.82% elf_machine_rela (inline) 0 0% 84.69% 4ms 0.82% ompi_mpi_finalize 0 0% 84.69% 4ms 0.82% resolve_map (inline) 0 0% 84.69% 4ms 0.82% std::pow (inline) 0 0% 84.69% 4ms 0.82% usleep 0 0% 84.69% 3ms 0.61% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 84.69% 3ms 0.61% VecCreate 0 0% 84.69% 3ms 0.61% VecCreate_Seq 0 0% 84.69% 3ms 0.61% VecSetType 0 0% 84.69% 3ms 0.61% XOpenDisplay 0 0% 84.69% 3ms 0.61% [hwloc_gl.so] 0 0% 84.69% 3ms 0.61% [libxcb.so.1.1.0] 0 0% 84.69% 3ms 0.61% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 84.69% 3ms 0.61% _XConnectXCB 3ms 0.61% 85.31% 3ms 0.61% __GI___libc_read 0 0% 85.31% 3ms 0.61% __GI_exit 1ms 0.2% 85.51% 3ms 0.61% __ieee754_pow_fma 3ms 0.61% 86.12% 3ms 0.61% __libc_openat64 0 0% 86.12% 3ms 0.61% __run_exit_handlers 3ms 0.61% 86.73% 3ms 0.61% __strcmp_avx2 0 0% 86.73% 3ms 0.61% _dl_fini 0 0% 86.73% 3ms 0.61% _dl_map_object_deps 0 0% 86.73% 3ms 0.61% _dl_map_segments (inline) 0 0% 86.73% 3ms 0.61% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 1ms 0.2% 86.94% 3ms 0.61% boost::serialization::void_cast_detail::void_caster::recursive_unregister 0 0% 86.94% 3ms 0.61% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 86.94% 3ms 0.61% mca_base_components_close 0 0% 86.94% 3ms 0.61% mca_base_framework_close 0 0% 86.94% 3ms 0.61% xcb_connect_to_display_with_auth_info