File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 123087ms, 91.37% of 134714ms total Dropped 1186 nodes (cum <= 673.57ms) flat flat% sum% cum cum% 0 0% 0% 134701ms 100% __libc_start_call_main 0 0% 0% 134701ms 100% __libc_start_main_impl 0 0% 0% 134701ms 100% _start 0 0% 0% 134698ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 134698ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 134698ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 134698ms 100% main 0 0% 0% 134656ms 100% AbstractConvergenceTester::Converge 0 0% 0% 134656ms 100% CxxTest::RealTestDescription::run 0 0% 0% 134656ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 134656ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 134656ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 134656ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 4ms 0.003% 0.003% 133432ms 99.05% AbstractCardiacProblem::Solve 11ms 0.0082% 0.011% 132469ms 98.33% AbstractDynamicLinearPdeSolver::Solve 8ms 0.0059% 0.017% 74535ms 55.33% LinearSystem::Solve 1ms 0.00074% 0.018% 73923ms 54.87% KSPSolve 22ms 0.016% 0.034% 73922ms 54.87% KSPSolve_Private 16ms 0.012% 0.046% 73539ms 54.59% KSPSolve_SYMMLQ 593ms 0.44% 0.49% 48013ms 35.64% AbstractCardiacTissue::SolveCellSystems 5ms 0.0037% 0.49% 40753ms 30.25% PCApply 8ms 0.0059% 0.5% 40728ms 30.23% PCApply_BJacobi_Singleblock 0 0% 0.5% 37841ms 28.09% KSPSolve_PREONLY (partial-inline) 1079ms 0.8% 1.30% 37195ms 27.61% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 7ms 0.0052% 1.30% 36822ms 27.33% MatSolve 0 0% 1.30% 36822ms 27.33% PCApply_ICC 36413ms 27.03% 28.33% 36815ms 27.33% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 5ms 0.0037% 28.34% 34874ms 25.89% KSP_PCApply.lto_priv.18 7676ms 5.70% 34.03% 32724ms 24.29% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 11ms 0.0082% 34.04% 26140ms 19.40% MatMult 456ms 0.34% 34.38% 26129ms 19.40% MatMult_SeqAIJ (partial-inline) 25472ms 18.91% 53.29% 25989ms 19.29% MatMult_SeqAIJ_Inode (inline) 2257ms 1.68% 54.96% 16989ms 12.61% CardiacNewtonSolver::Solve 5544ms 4.12% 59.08% 9996ms 7.42% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1451ms 1.08% 60.16% 9691ms 7.19% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 203ms 0.15% 60.31% 9191ms 6.82% AbstractCardiacTissue::UpdateCaches (inline) 1336ms 0.99% 61.30% 8686ms 6.45% BidomainSolver::SetupLinearSystem 1742ms 1.29% 62.59% 8613ms 6.39% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 7918ms 5.88% 68.47% 7918ms 5.88% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 0 0% 68.47% 7680ms 5.70% KSP_PCApply (partial-inline) 8ms 0.0059% 68.48% 7334ms 5.44% KSPConvergedDefault 0 0% 68.48% 4278ms 3.18% boost::numeric::ublas::norm_inf (inline) 3010ms 2.23% 70.71% 4278ms 3.18% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 70.71% 4278ms 3.18% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 70.71% 4278ms 3.18% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 4144ms 3.08% 73.79% 4249ms 3.15% __ieee754_log_fma 3416ms 2.54% 76.32% 3416ms 2.54% ddot_ 9ms 0.0067% 76.33% 3367ms 2.50% MatNullSpaceRemove 3298ms 2.45% 78.78% 3298ms 2.45% __memcpy_avx_unaligned_erms 30ms 0.022% 78.80% 3293ms 2.44% std::pow (inline) 0 0% 78.80% 3244ms 2.41% PetscMemcpy (inline) 399ms 0.3% 79.09% 3239ms 2.40% __pow 2058ms 1.53% 80.62% 3179ms 2.36% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 19ms 0.014% 80.64% 2926ms 2.17% VecAXPY 3ms 0.0022% 80.64% 2907ms 2.16% VecAXPY_Seq 28ms 0.021% 80.66% 2891ms 2.15% VecCopy 2888ms 2.14% 82.80% 2888ms 2.14% daxpy_ 4ms 0.003% 82.81% 2863ms 2.13% VecCopy_Seq (partial-inline) 3ms 0.0022% 82.81% 2822ms 2.09% VecDot 0 0% 82.81% 2819ms 2.09% VecDot_Seq 1ms 0.00074% 82.81% 2819ms 2.09% VecXDot_Seq_Private.constprop.0 380ms 0.28% 83.09% 2804ms 2.08% __ieee754_pow_fma 5ms 0.0037% 83.10% 2183ms 1.62% VecMDot 19ms 0.014% 83.11% 2178ms 1.62% VecMXDot_Private 2142ms 1.59% 84.70% 2149ms 1.60% VecMDot_Seq 0 0% 84.70% 2047ms 1.52% AbstractFeVolumeIntegralAssembler::DoAssemble 23ms 0.017% 84.72% 1704ms 1.26% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1624ms 1.21% 85.92% 1680ms 1.25% exp_inline (inline) 0 0% 85.92% 1419ms 1.05% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 85.92% 1258ms 0.93% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 85.92% 1258ms 0.93% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 85.92% 1258ms 0.93% boost_numeric_ublas_abs (inline) 1258ms 0.93% 86.86% 1258ms 0.93% std::abs (inline) 10ms 0.0074% 86.86% 1175ms 0.87% VecMAXPY 1161ms 0.86% 87.73% 1165ms 0.86% VecMAXPY_Seq 7ms 0.0052% 87.73% 1134ms 0.84% boost::numeric::ublas::matrix_assign (inline) 255ms 0.19% 87.92% 1120ms 0.83% boost::numeric::ublas::indexing_matrix_assign 742ms 0.55% 88.47% 1064ms 0.79% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 88.47% 1042ms 0.77% CuboidMeshConstructor::Construct 0 0% 88.47% 1041ms 0.77% AbstractTetrahedralMesh::ConstructRegularSlabMesh 2ms 0.0015% 88.47% 1041ms 0.77% DistributedTetrahedralMesh::ConstructCuboid 2ms 0.0015% 88.47% 1010ms 0.75% KSP_RemoveNullSpace (inline) 996ms 0.74% 89.21% 996ms 0.74% [libchaste_heart.so] 985ms 0.73% 89.94% 985ms 0.73% __memset_avx2_unaligned_erms 0 0% 89.94% 967ms 0.72% PetscMemzero (inline) 1ms 0.00074% 89.94% 946ms 0.7% Element::Element 6ms 0.0045% 89.95% 943ms 0.7% VecScale 3ms 0.0022% 89.95% 937ms 0.7% VecScale_Seq 1ms 0.00074% 89.95% 933ms 0.69% VecNorm 929ms 0.69% 90.64% 929ms 0.69% dscal_ 0 0% 90.64% 923ms 0.69% VecNorm_Seq 5ms 0.0037% 90.65% 919ms 0.68% AbstractTetrahedralElement::CalculateJacobian 5ms 0.0037% 90.65% 899ms 0.67% VecDuplicate 8ms 0.0059% 90.66% 894ms 0.66% BidomainAssembler::ComputeMatrixTerm 1ms 0.00074% 90.66% 877ms 0.65% BidomainProblem::WriteOneStep 8ms 0.0059% 90.66% 865ms 0.64% boost::numeric::ublas::c_matrix::c_matrix (inline) 4ms 0.003% 90.66% 863ms 0.64% AbstractTetrahedralElement::AbstractTetrahedralElement 4ms 0.003% 90.67% 802ms 0.6% AbstractBidomainSolver::FinaliseLinearSystem 239ms 0.18% 90.85% 797ms 0.59% AbstractBidomainSolver::CheckCompatibilityCondition 706ms 0.52% 91.37% 706ms 0.52% log_inline (inline)