File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 349ms, 92.82% of 376ms total Dropped 144 nodes (cum <= 1.88ms) flat flat% sum% cum cum% 0 0% 0% 370ms 98.40% __libc_start_call_main 0 0% 0% 370ms 98.40% __libc_start_main_impl 0 0% 0% 370ms 98.40% _start 0 0% 0% 368ms 97.87% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 368ms 97.87% CxxTest::TestRunner::runAllTests 0 0% 0% 368ms 97.87% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 368ms 97.87% main 0 0% 0% 331ms 88.03% CxxTest::RealTestDescription::run 0 0% 0% 331ms 88.03% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 331ms 88.03% CxxTest::TestRunner::runTest (inline) 0 0% 0% 331ms 88.03% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 331ms 88.03% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 327ms 86.97% AbstractCardiacProblem::Solve 0 0% 0% 326ms 86.70% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 300ms 79.79% KSPSolve 0 0% 0% 300ms 79.79% KSPSolve_Private 0 0% 0% 300ms 79.79% LinearSystem::Solve 0 0% 0% 299ms 79.52% KSPSolve_CG 0 0% 0% 208ms 55.32% KSP_PCApply.lto_priv.7 0 0% 0% 199ms 52.93% PCApply 1ms 0.27% 0.27% 199ms 52.93% PCApply_BJacobi_Singleblock 0 0% 0.27% 174ms 46.28% KSPSolve_PREONLY (partial-inline) 0 0% 0.27% 168ms 44.68% MatSolve 168ms 44.68% 44.95% 168ms 44.68% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 44.95% 168ms 44.68% PCApply_ICC 0 0% 44.95% 48ms 12.77% MatMult 0 0% 44.95% 48ms 12.77% MatMult_SeqAIJ 48ms 12.77% 57.71% 48ms 12.77% MatMult_SeqAIJ_Inode (inline) 0 0% 57.71% 35ms 9.31% CxxTest::RealWorldDescription::setUp 0 0% 57.71% 35ms 9.31% PMPI_Init_thread 0 0% 57.71% 35ms 9.31% PetscInitialize 0 0% 57.71% 35ms 9.31% PetscSetup::setUpWorld 0 0% 57.71% 35ms 9.31% PetscSetupUtils::CommonSetup 0 0% 57.71% 35ms 9.31% PetscSetupUtils::InitialisePetsc 0 0% 57.71% 35ms 9.31% ompi_mpi_init 0 0% 57.71% 31ms 8.24% MatNullSpaceRemove 0 0% 57.71% 30ms 7.98% 26ms 6.91% 64.63% 26ms 6.91% ddot_ 0 0% 64.63% 24ms 6.38% orte_init 1ms 0.27% 64.89% 22ms 5.85% AbstractCardiacTissue::SolveCellSystems 0 0% 64.89% 17ms 4.52% VecTDot 0 0% 64.89% 17ms 4.52% VecTDot_Seq 0 0% 64.89% 17ms 4.52% VecXDot_Seq_Private.constprop.0 0 0% 64.89% 16ms 4.26% VecMDot 16ms 4.26% 69.15% 16ms 4.26% VecMDot_Seq 0 0% 69.15% 16ms 4.26% VecMXDot_Private 0 0% 69.15% 15ms 3.99% VecMAXPY 14ms 3.72% 72.87% 15ms 3.99% VecMAXPY_Seq 0 0% 72.87% 15ms 3.99% hwloc_topology_load 0 0% 72.87% 14ms 3.72% hwloc_linux_get_tid_last_cpu_location 0 0% 72.87% 14ms 3.72% mca_base_framework_open 1ms 0.27% 73.14% 13ms 3.46% AbstractCardiacCell::ComputeExceptVoltage 0 0% 73.14% 12ms 3.19% __GI__dl_catch_exception 0 0% 73.14% 12ms 3.19% _dl_catch_error 0 0% 73.14% 12ms 3.19% _dlerror_run 0 0% 73.14% 12ms 3.19% mca_base_framework_components_register 0 0% 73.14% 12ms 3.19% mca_base_framework_register 0 0% 73.14% 11ms 2.93% opal_stackframe_output 1ms 0.27% 73.40% 10ms 2.66% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 73.40% 10ms 2.66% VecAYPX 10ms 2.66% 76.06% 10ms 2.66% VecAYPX_Seq 0 0% 76.06% 10ms 2.66% ___dlopen 0 0% 76.06% 10ms 2.66% _dl_open 0 0% 76.06% 10ms 2.66% dlopen_doit 0 0% 76.06% 10ms 2.66% dlopen_implementation (inline) 0 0% 76.06% 9ms 2.39% VecNorm 0 0% 76.06% 9ms 2.39% VecNorm_Seq 5ms 1.33% 77.39% 9ms 2.39% __GI___exp 0 0% 77.39% 9ms 2.39% _dl_init 0 0% 77.39% 9ms 2.39% call_init (inline) 0 0% 77.39% 9ms 2.39% dl_open_worker 0 0% 77.39% 9ms 2.39% mca_base_component_find 0 0% 77.39% 9ms 2.39% mca_base_component_repository_open 0 0% 77.39% 8ms 2.13% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 77.39% 8ms 2.13% EulerIvpOdeSolver::CalculateNextYValue 8ms 2.13% 79.52% 8ms 2.13% __GI___libc_read 0 0% 79.52% 7ms 1.86% AbstractCardiacTissue::UpdateCaches (inline) 2ms 0.53% 80.05% 7ms 1.86% CellLuoRudy1991FromCellML::GetIIonic 0 0% 80.05% 7ms 1.86% KSP_PCApply (partial-inline) 0 0% 80.05% 7ms 1.86% VecAXPY 0 0% 80.05% 7ms 1.86% VecAXPY_Seq 0 0% 80.05% 7ms 1.86% VecDuplicate 0 0% 80.05% 7ms 1.86% VecDuplicate_Seq 7ms 1.86% 81.91% 7ms 1.86% daxpy_ 0 0% 81.91% 6ms 1.60% _dl_start_user 0 0% 81.91% 6ms 1.60% dl_open_worker_begin 0 0% 81.91% 6ms 1.60% mca_base_framework_components_open 0 0% 81.91% 6ms 1.60% opal_hwloc_base_get_topology 0 0% 81.91% 6ms 1.60% orte_ess_base_proc_binding 0 0% 81.91% 5ms 1.33% VecSetType 1ms 0.27% 82.18% 5ms 1.33% _dl_runtime_resolve_xsavec 0 0% 82.18% 5ms 1.33% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 82.18% 5ms 1.33% boost::serialization::singleton::get_instance 0 0% 82.18% 5ms 1.33% mca_topo_base_dist_graph_neighbors_count 0 0% 82.18% 4ms 1.06% VecCreate_Seq 0 0% 82.18% 4ms 1.06% __GI___libc_malloc 1ms 0.27% 82.45% 4ms 1.06% __ieee754_exp_fma 3ms 0.8% 83.24% 4ms 1.06% _dl_fixup 1ms 0.27% 83.51% 4ms 1.06% _dl_map_object 4ms 1.06% 84.57% 4ms 1.06% _int_malloc 0 0% 84.57% 4ms 1.06% mca_base_var_group_register 0 0% 84.57% 4ms 1.06% mca_base_var_register 0 0% 84.57% 3ms 0.8% AbstractCardiacProblem::Initialise 0 0% 84.57% 3ms 0.8% BidomainSolver::SetupLinearSystem 0 0% 84.57% 3ms 0.8% PetscMallocA 0 0% 84.57% 3ms 0.8% PetscMallocAlign (partial-inline) 0 0% 84.57% 3ms 0.8% PetscMemzero (inline) 0 0% 84.57% 3ms 0.8% [hwloc_pci.so] 3ms 0.8% 85.37% 3ms 0.8% [libchaste_heart.so] 0 0% 85.37% 3ms 0.8% [libpciaccess.so.0.11.1] 3ms 0.8% 86.17% 3ms 0.8% __GI___clock_nanosleep 0 0% 86.17% 3ms 0.8% __GI___nanosleep 1ms 0.27% 86.44% 3ms 0.8% __GI_getenv 3ms 0.8% 87.23% 3ms 0.8% __libc_openat64 3ms 0.8% 88.03% 3ms 0.8% __memset_avx512_unaligned_erms 0 0% 88.03% 3ms 0.8% _dl_map_object_deps 0 0% 88.03% 3ms 0.8% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 88.03% 3ms 0.8% mca_base_component_var_register 0 0% 88.03% 3ms 0.8% openaux 0 0% 88.03% 3ms 0.8% operator new 0 0% 88.03% 3ms 0.8% pci_get_strings 0 0% 88.03% 3ms 0.8% usleep 0 0% 88.03% 2ms 0.53% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 88.03% 2ms 0.53% CxxTest::RealWorldDescription::tearDown 0 0% 88.03% 2ms 0.53% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 88.03% 2ms 0.53% KSPSetUp 0 0% 88.03% 2ms 0.53% PetscFinalize 0 0% 88.03% 2ms 0.53% PetscSetup::tearDownWorld 0 0% 88.03% 2ms 0.53% PetscSetupUtils::CommonFinalize 0 0% 88.03% 2ms 0.53% VecCreate 0 0% 88.03% 2ms 0.53% XOpenDisplay 0 0% 88.03% 2ms 0.53% [hwloc_gl.so] 0 0% 88.03% 2ms 0.53% [libxcb.so.1.1.0] 0 0% 88.03% 2ms 0.53% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 88.03% 2ms 0.53% _XConnectXCB 0 0% 88.03% 2ms 0.53% __GI___strdup 0 0% 88.03% 2ms 0.53% __GI_exit 0 0% 88.03% 2ms 0.53% __cxa_finalize 0 0% 88.03% 2ms 0.53% __dlclose 0 0% 88.03% 2ms 0.53% __ieee754_pow_fma 2ms 0.53% 88.56% 2ms 0.53% __memcpy_avx512_unaligned_erms 2ms 0.53% 89.10% 2ms 0.53% __mmap64 0 0% 89.10% 2ms 0.53% __pow 0 0% 89.10% 2ms 0.53% __run_exit_handlers 2ms 0.53% 89.63% 2ms 0.53% __strcmp_evex 2ms 0.53% 90.16% 2ms 0.53% __strlen_evex 0 0% 90.16% 2ms 0.53% _dl_call_fini 0 0% 90.16% 2ms 0.53% _dl_close 1ms 0.27% 90.43% 2ms 0.53% _dl_close_worker (inline) 0 0% 90.43% 2ms 0.53% _dl_fini 0 0% 90.43% 2ms 0.53% _dl_lookup_symbol_x 0 0% 90.43% 2ms 0.53% _dl_map_object_from_fd 0 0% 90.43% 2ms 0.53% _dl_map_segments (inline) 0 0% 90.43% 2ms 0.53% _dl_open_relocate_one_object (inline) 0 0% 90.43% 2ms 0.53% _dl_relocate_object 0 0% 90.43% 2ms 0.53% boost::archive::detail::pointer_iserializer::pointer_iserializer (inline) 0 0% 90.43% 2ms 0.53% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 90.43% 2ms 0.53% boost::serialization::singleton::get_const_instance (inline) 1ms 0.27% 90.69% 2ms 0.53% boost::serialization::void_cast_detail::void_caster::recursive_register 2ms 0.53% 91.22% 2ms 0.53% do_lookup_x 0 0% 91.22% 2ms 0.53% elf_dynamic_do_Rela (inline) 0 0% 91.22% 2ms 0.53% elf_machine_rela (inline) 2ms 0.53% 91.76% 2ms 0.53% exp_inline (inline) 0 0% 91.76% 2ms 0.53% gzclearerr 0 0% 91.76% 2ms 0.53% gzgets 0 0% 91.76% 2ms 0.53% mca_base_component_repository_release 0 0% 91.76% 2ms 0.53% ompi_mpi_finalize 0 0% 91.76% 2ms 0.53% opal_timer_base_get_freq 0 0% 91.76% 2ms 0.53% resolve_map (inline) 2ms 0.53% 92.29% 2ms 0.53% std::_Rb_tree_increment 0 0% 92.29% 2ms 0.53% std::__new_allocator::allocate (inline) 0 0% 92.29% 2ms 0.53% std::pow (inline) 2ms 0.53% 92.82% 2ms 0.53% top12 (inline) 0 0% 92.82% 2ms 0.53% xcb_connect_to_display_with_auth_info