File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 383ms, 87.05% of 440ms total Dropped 211 nodes (cum <= 2.20ms) flat flat% sum% cum cum% 0 0% 0% 434ms 98.64% __libc_start_call_main 0 0% 0% 434ms 98.64% __libc_start_main_impl 0 0% 0% 434ms 98.64% _start 0 0% 0% 431ms 97.95% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 431ms 97.95% CxxTest::TestRunner::runAllTests 0 0% 0% 431ms 97.95% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 431ms 97.95% main 0 0% 0% 396ms 90.00% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 396ms 90.00% CxxTest::TestRunner::runTest (inline) 0 0% 0% 395ms 89.77% CxxTest::RealTestDescription::run 0 0% 0% 395ms 89.77% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 395ms 89.77% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 390ms 88.64% AbstractCardiacProblem::Solve 0 0% 0% 390ms 88.64% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 343ms 77.95% LinearSystem::Solve 0 0% 0% 342ms 77.73% KSPSolve 0 0% 0% 342ms 77.73% KSPSolve_CG 1ms 0.23% 0.23% 342ms 77.73% KSPSolve_Private 0 0% 0.23% 191ms 43.41% KSP_PCApply.lto_priv.7 0 0% 0.23% 184ms 41.82% PCApply 0 0% 0.23% 184ms 41.82% PCApply_BJacobi_Singleblock 0 0% 0.23% 161ms 36.59% KSPSolve_PREONLY (partial-inline) 0 0% 0.23% 151ms 34.32% MatSolve 147ms 33.41% 33.64% 151ms 34.32% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 33.64% 151ms 34.32% PCApply_ICC 0 0% 33.64% 75ms 17.05% MatMult 1ms 0.23% 33.86% 75ms 17.05% MatMult_SeqAIJ (partial-inline) 74ms 16.82% 50.68% 75ms 17.05% MatMult_SeqAIJ_Inode (inline) 48ms 10.91% 61.59% 48ms 10.91% ddot_ 0 0% 61.59% 41ms 9.32% AbstractCardiacTissue::SolveCellSystems 0 0% 61.59% 32ms 7.27% CxxTest::RealWorldDescription::setUp 0 0% 61.59% 32ms 7.27% PMPI_Init_thread 0 0% 61.59% 32ms 7.27% PetscInitialize 0 0% 61.59% 32ms 7.27% PetscSetup::setUpWorld 0 0% 61.59% 32ms 7.27% PetscSetupUtils::CommonSetup 0 0% 61.59% 32ms 7.27% PetscSetupUtils::InitialisePetsc 0 0% 61.59% 32ms 7.27% ompi_mpi_init 1ms 0.23% 61.82% 28ms 6.36% MatNullSpaceRemove 0 0% 61.82% 28ms 6.36% VecTDot 0 0% 61.82% 28ms 6.36% VecTDot_Seq 0 0% 61.82% 28ms 6.36% VecXDot_Seq_Private.constprop.0 0 0% 61.82% 24ms 5.45% 0 0% 61.82% 22ms 5.00% AbstractCardiacCell::ComputeExceptVoltage 0 0% 61.82% 22ms 5.00% orte_init 0 0% 61.82% 20ms 4.55% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 61.82% 20ms 4.55% VecNorm 0 0% 61.82% 20ms 4.55% VecNorm_Seq 4ms 0.91% 62.73% 19ms 4.32% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 62.73% 19ms 4.32% EulerIvpOdeSolver::CalculateNextYValue 0 0% 62.73% 18ms 4.09% VecMDot 16ms 3.64% 66.36% 18ms 4.09% VecMDot_Seq 0 0% 66.36% 18ms 4.09% VecMXDot_Private 1ms 0.23% 66.59% 15ms 3.41% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 66.59% 15ms 3.41% KSP_PCApply (partial-inline) 8ms 1.82% 68.41% 15ms 3.41% __GI___exp 8ms 1.82% 70.23% 14ms 3.18% CellLuoRudy1991FromCellML::GetIIonic 0 0% 70.23% 14ms 3.18% hwloc_topology_load 0 0% 70.23% 14ms 3.18% mca_base_framework_open 0 0% 70.23% 13ms 2.95% VecAYPX 12ms 2.73% 72.95% 13ms 2.95% VecAYPX_Seq 0 0% 72.95% 13ms 2.95% __GI__dl_catch_exception 0 0% 72.95% 13ms 2.95% _dl_catch_error 0 0% 72.95% 13ms 2.95% _dlerror_run 0 0% 72.95% 13ms 2.95% hwloc_linux_get_tid_last_cpu_location 0 0% 72.95% 13ms 2.95% mca_base_framework_register 0 0% 72.95% 12ms 2.73% mca_base_framework_components_register 0 0% 72.95% 12ms 2.73% opal_stackframe_output 0 0% 72.95% 11ms 2.50% ___dlopen 0 0% 72.95% 11ms 2.50% _dl_open 0 0% 72.95% 11ms 2.50% dlopen_doit 0 0% 72.95% 11ms 2.50% dlopen_implementation (inline) 0 0% 72.95% 10ms 2.27% dl_open_worker 0 0% 72.95% 10ms 2.27% dl_open_worker_begin 0 0% 72.95% 10ms 2.27% mca_base_component_find 0 0% 72.95% 10ms 2.27% mca_base_component_repository_open 0 0% 72.95% 9ms 2.05% VecAXPY 0 0% 72.95% 9ms 2.05% VecAXPY_Seq 2ms 0.45% 73.41% 9ms 2.05% VecMAXPY 8ms 1.82% 75.23% 8ms 1.82% daxpy_ 0 0% 75.23% 7ms 1.59% KSPConvergedDefault 7ms 1.59% 76.82% 7ms 1.59% VecMAXPY_Seq 6ms 1.36% 78.18% 7ms 1.59% __ieee754_exp_fma 7ms 1.59% 79.77% 7ms 1.59% __memcpy_avx_unaligned_erms 0 0% 79.77% 7ms 1.59% _dl_map_object 0 0% 79.77% 6ms 1.36% PetscMemcpy (inline) 0 0% 79.77% 6ms 1.36% _dl_init 0 0% 79.77% 6ms 1.36% _dl_lookup_symbol_x 0 0% 79.77% 6ms 1.36% _dl_start_user 1ms 0.23% 80.00% 6ms 1.36% boost::serialization::singleton::get_instance 0 0% 80.00% 6ms 1.36% call_init (inline) 0 0% 80.00% 5ms 1.14% VecDuplicate 0 0% 80.00% 5ms 1.14% VecDuplicate_Seq 1ms 0.23% 80.23% 5ms 1.14% _dl_map_object_from_fd 0 0% 80.23% 5ms 1.14% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 80.23% 5ms 1.14% opal_hwloc_base_get_topology 0 0% 80.23% 5ms 1.14% orte_ess_base_proc_binding 0 0% 80.23% 4ms 0.91% AbstractCardiacProblem::Initialise 1ms 0.23% 80.45% 4ms 0.91% BidomainSolver::SetupLinearSystem 0 0% 80.45% 4ms 0.91% PMPI_Comm_get_attr 0 0% 80.45% 4ms 0.91% PetscHeaderCreate_Private 0 0% 80.45% 4ms 0.91% VecDestroy 1ms 0.23% 80.68% 4ms 0.91% __GI___libc_malloc 4ms 0.91% 81.59% 4ms 0.91% __ieee754_log_fma 4ms 0.91% 82.50% 4ms 0.91% __memset_avx2_unaligned_erms 0 0% 82.50% 4ms 0.91% _dl_fixup 0 0% 82.50% 4ms 0.91% _dl_runtime_resolve_xsavec 4ms 0.91% 83.41% 4ms 0.91% _int_malloc 4ms 0.91% 84.32% 4ms 0.91% do_lookup_x 1ms 0.23% 84.55% 4ms 0.91% ompi_attr_get_c 0 0% 84.55% 3ms 0.68% CxxTest::RealWorldDescription::tearDown 0 0% 84.55% 3ms 0.68% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 84.55% 3ms 0.68% PetscFinalize 0 0% 84.55% 3ms 0.68% PetscMallocA 0 0% 84.55% 3ms 0.68% PetscMallocAlign (partial-inline) 0 0% 84.55% 3ms 0.68% PetscMemzero (inline) 0 0% 84.55% 3ms 0.68% PetscSetup::tearDownWorld 0 0% 84.55% 3ms 0.68% PetscSetupUtils::CommonFinalize 0 0% 84.55% 3ms 0.68% TrianglesMeshReader::GetNextItemFromStream 1ms 0.23% 84.77% 3ms 0.68% VecCopy 0 0% 84.77% 3ms 0.68% VecCreate 0 0% 84.77% 3ms 0.68% XOpenDisplay 0 0% 84.77% 3ms 0.68% [hwloc_gl.so] 0 0% 84.77% 3ms 0.68% _XConnectXCB 1ms 0.23% 85.00% 3ms 0.68% __GI___libc_free 3ms 0.68% 85.68% 3ms 0.68% __GI___libc_read 0 0% 85.68% 3ms 0.68% __GI_exit 0 0% 85.68% 3ms 0.68% __cxa_finalize 0 0% 85.68% 3ms 0.68% __run_exit_handlers 0 0% 85.68% 3ms 0.68% _dl_call_fini 0 0% 85.68% 3ms 0.68% _dl_fini 0 0% 85.68% 3ms 0.68% _dl_open_relocate_one_object (inline) 0 0% 85.68% 3ms 0.68% _dl_relocate_object 0 0% 85.68% 3ms 0.68% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 85.68% 3ms 0.68% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 85.68% 3ms 0.68% boost::serialization::void_cast_detail::void_caster::recursive_unregister 0 0% 85.68% 3ms 0.68% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 85.68% 3ms 0.68% boost::serialization::void_cast_detail::void_caster_primitive::~void_caster_primitive (inline) 0 0% 85.68% 3ms 0.68% elf_dynamic_do_Rela (inline) 3ms 0.68% 86.36% 3ms 0.68% elf_get_dynamic_info (inline) 0 0% 86.36% 3ms 0.68% elf_machine_rela (inline) 0 0% 86.36% 3ms 0.68% mca_base_framework_components_open 0 0% 86.36% 3ms 0.68% ompi_mpi_finalize 0 0% 86.36% 3ms 0.68% resolve_map (inline) 3ms 0.68% 87.05% 3ms 0.68% std::_Rb_tree_increment