File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 111185ms, 91.92% of 120953ms total Dropped 1169 nodes (cum <= 604.76ms) flat flat% sum% cum cum% 0 0% 0% 120943ms 100% __libc_start_call_main 0 0% 0% 120943ms 100% __libc_start_main_impl 0 0% 0% 120943ms 100% _start 0 0% 0% 120940ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 120940ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 120940ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 120940ms 100% main 0 0% 0% 120902ms 100% CxxTest::RealTestDescription::run 0 0% 0% 120902ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 120902ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 120902ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 120902ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 120901ms 100% AbstractConvergenceTester::Converge 5ms 0.0041% 0.0041% 119634ms 98.91% AbstractCardiacProblem::Solve 9ms 0.0074% 0.012% 118781ms 98.20% AbstractDynamicLinearPdeSolver::Solve 2ms 0.0017% 0.013% 66955ms 55.36% LinearSystem::Solve 1ms 0.00083% 0.014% 66400ms 54.90% KSPSolve 10ms 0.0083% 0.022% 66399ms 54.90% KSPSolve_Private 15ms 0.012% 0.035% 65945ms 54.52% KSPSolve_SYMMLQ 198ms 0.16% 0.2% 42832ms 35.41% AbstractCardiacTissue::SolveCellSystems 2ms 0.0017% 0.2% 37341ms 30.87% PCApply 1ms 0.00083% 0.2% 37333ms 30.87% PCApply_BJacobi_Singleblock 4ms 0.0033% 0.2% 34716ms 28.70% KSPSolve_PREONLY (partial-inline) 2ms 0.0017% 0.21% 33503ms 27.70% PCApply_ICC 5ms 0.0041% 0.21% 33501ms 27.70% MatSolve 33011ms 27.29% 27.50% 33496ms 27.69% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1367ms 1.13% 28.63% 32862ms 27.17% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 1ms 0.00083% 28.63% 32189ms 26.61% KSP_PCApply.lto_priv.18 6931ms 5.73% 34.36% 28473ms 23.54% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 8ms 0.0066% 34.37% 22844ms 18.89% MatMult 290ms 0.24% 34.61% 22836ms 18.88% MatMult_SeqAIJ (partial-inline) 22338ms 18.47% 53.08% 22813ms 18.86% MatMult_SeqAIJ_Inode (inline) 1877ms 1.55% 54.63% 14618ms 12.09% CardiacNewtonSolver::Solve 323ms 0.27% 54.90% 9113ms 7.53% AbstractCardiacTissue::UpdateCaches (inline) 2048ms 1.69% 56.59% 8596ms 7.11% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 4336ms 3.58% 60.18% 8587ms 7.10% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1193ms 0.99% 61.16% 8031ms 6.64% BidomainSolver::SetupLinearSystem 1137ms 0.94% 62.10% 7402ms 6.12% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 0 0% 62.10% 7195ms 5.95% KSP_PCApply (partial-inline) 6ms 0.005% 62.11% 6508ms 5.38% KSPConvergedDefault 6009ms 4.97% 67.07% 6009ms 4.97% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3899ms 3.22% 70.30% 3944ms 3.26% __ieee754_log_fma 0 0% 70.30% 3752ms 3.10% boost::numeric::ublas::norm_inf (inline) 2551ms 2.11% 72.41% 3752ms 3.10% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.41% 3752ms 3.10% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.41% 3752ms 3.10% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3ms 0.0025% 72.41% 3428ms 2.83% MatNullSpaceRemove 26ms 0.021% 72.43% 3310ms 2.74% std::pow (inline) 402ms 0.33% 72.76% 3282ms 2.71% __pow 3211ms 2.65% 75.42% 3211ms 2.65% __memcpy_avx_unaligned_erms 0 0% 75.42% 3160ms 2.61% PetscMemcpy (inline) 370ms 0.31% 75.72% 2867ms 2.37% __ieee754_pow_fma 1741ms 1.44% 77.16% 2850ms 2.36% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 2814ms 2.33% 79.49% 2814ms 2.33% ddot_ 12ms 0.0099% 79.50% 2704ms 2.24% VecCopy 2ms 0.0017% 79.50% 2691ms 2.22% VecCopy_Seq (partial-inline) 28ms 0.023% 79.53% 2553ms 2.11% VecAXPY 3ms 0.0025% 79.53% 2525ms 2.09% VecAXPY_Seq 2499ms 2.07% 81.59% 2499ms 2.07% daxpy_ 3ms 0.0025% 81.60% 2318ms 1.92% VecDot 0 0% 81.60% 2315ms 1.91% VecDot_Seq 2ms 0.0017% 81.60% 2315ms 1.91% VecXDot_Seq_Private.constprop.0 0 0% 81.60% 2083ms 1.72% AbstractFeVolumeIntegralAssembler::DoAssemble 3ms 0.0025% 81.60% 1954ms 1.62% VecMDot 11ms 0.0091% 81.61% 1951ms 1.61% VecMXDot_Private 1930ms 1.60% 83.21% 1937ms 1.60% VecMDot_Seq 21ms 0.017% 83.22% 1731ms 1.43% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1623ms 1.34% 84.56% 1692ms 1.40% exp_inline (inline) 4ms 0.0033% 84.57% 1471ms 1.22% VecMAXPY 1461ms 1.21% 85.78% 1467ms 1.21% VecMAXPY_Seq 0 0% 85.78% 1427ms 1.18% AbstractFeAssemblerInterface::AssembleMatrix (inline) 1373ms 1.14% 86.91% 1373ms 1.14% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 1165ms 0.96% 87.87% 1165ms 0.96% __memset_avx2_unaligned_erms 0 0% 87.87% 1159ms 0.96% PetscMemzero (inline) 4ms 0.0033% 87.88% 1145ms 0.95% boost::numeric::ublas::matrix_assign (inline) 229ms 0.19% 88.07% 1133ms 0.94% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.07% 1118ms 0.92% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 88.07% 1118ms 0.92% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 88.07% 1118ms 0.92% boost_numeric_ublas_abs (inline) 1118ms 0.92% 88.99% 1118ms 0.92% std::abs (inline) 0 0% 88.99% 1117ms 0.92% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.99% 1117ms 0.92% CuboidMeshConstructor::Construct 0 0% 88.99% 1117ms 0.92% DistributedTetrahedralMesh::ConstructCuboid 838ms 0.69% 89.68% 1102ms 0.91% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 1ms 0.00083% 89.68% 1017ms 0.84% Element::Element 7ms 0.0058% 89.69% 1012ms 0.84% AbstractTetrahedralElement::CalculateJacobian 2ms 0.0017% 89.69% 982ms 0.81% VecDuplicate 3ms 0.0025% 89.69% 952ms 0.79% AbstractTetrahedralElement::AbstractTetrahedralElement 7ms 0.0058% 89.70% 876ms 0.72% BidomainAssembler::ComputeMatrixTerm 6ms 0.005% 89.71% 870ms 0.72% boost::numeric::ublas::c_matrix::c_matrix (inline) 4ms 0.0033% 89.71% 864ms 0.71% VecScale 2ms 0.0017% 89.71% 860ms 0.71% VecScale_Seq 852ms 0.7% 90.41% 852ms 0.7% dscal_ 11ms 0.0091% 90.42% 827ms 0.68% PetscMallocA 817ms 0.68% 91.10% 817ms 0.68% [libchaste_heart.so] 11ms 0.0091% 91.11% 816ms 0.67% PetscMallocAlign (partial-inline) 1ms 0.00083% 91.11% 787ms 0.65% BidomainProblem::WriteOneStep 4ms 0.0033% 91.11% 779ms 0.64% VecNorm 4ms 0.0033% 91.12% 770ms 0.64% VecNorm_Seq 767ms 0.63% 91.75% 767ms 0.63% log_inline (inline) 1ms 0.00083% 91.75% 660ms 0.55% AbstractBidomainSolver::FinaliseLinearSystem 210ms 0.17% 91.92% 658ms 0.54% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 91.92% 656ms 0.54% AbstractFeAssemblerInterface::Assemble (inline)