File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12770ms, 85.66% of 14907ms total Dropped 724 nodes (cum <= 74.53ms) flat flat% sum% cum cum% 0 0% 0% 14898ms 99.94% __libc_start_call_main 0 0% 0% 14898ms 99.94% __libc_start_main_impl 0 0% 0% 14898ms 99.94% _start 0 0% 0% 14895ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14895ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14895ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14895ms 99.92% main 0 0% 0% 14858ms 99.67% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14858ms 99.67% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14858ms 99.67% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0067% 0.0067% 14837ms 99.53% AbstractCardiacProblem::Solve 4ms 0.027% 0.034% 11439ms 76.74% AbstractDynamicLinearPdeSolver::Solve 47ms 0.32% 0.35% 9145ms 61.35% AbstractCardiacTissue::SolveCellSystems 103ms 0.69% 1.04% 5596ms 37.54% AbstractCardiacCell::ComputeExceptVoltage 173ms 1.16% 2.20% 4870ms 32.67% AbstractOneStepIvpOdeSolver::InternalSolve 179ms 1.20% 3.40% 4156ms 27.88% EulerIvpOdeSolver::CalculateNextYValue 878ms 5.89% 9.29% 3915ms 26.26% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1843ms 12.36% 21.65% 3677ms 24.67% __GI___exp 3ms 0.02% 21.67% 3333ms 22.36% MonodomainProblem::WriteOneStep 1ms 0.0067% 21.68% 3186ms 21.37% Hdf5DataWriter::PutVector 2ms 0.013% 21.69% 3177ms 21.31% H5Dwrite 5ms 0.034% 21.73% 3144ms 21.09% H5D__write 97ms 0.65% 22.38% 2682ms 17.99% AbstractCardiacTissue::UpdateCaches (inline) 762ms 5.11% 27.49% 2547ms 17.09% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.49% 1818ms 12.20% H5D__chunk_collective_write 20ms 0.13% 27.62% 1818ms 12.20% H5F_set_coll_metadata_reads 1614ms 10.83% 38.45% 1763ms 11.83% __ieee754_exp_fma 19ms 0.13% 38.58% 1593ms 10.69% H5FD_s3comms_uriencode 1ms 0.0067% 38.59% 1485ms 9.96% LinearSystem::Solve 0 0% 38.59% 1353ms 9.08% KSPSolve 6ms 0.04% 38.63% 1353ms 9.08% KSPSolve_Private 6ms 0.04% 38.67% 1332ms 8.94% KSPSolve_CG 8ms 0.054% 38.72% 1214ms 8.14% H5D__chunk_cacheable 6ms 0.04% 38.76% 1205ms 8.08% H5F_block_write 0 0% 38.76% 1199ms 8.04% H5FD_write 0 0% 38.76% 1199ms 8.04% H5F__accum_write 0 0% 38.76% 1199ms 8.04% H5PB_write 47ms 0.32% 39.08% 1191ms 7.99% 1ms 0.0067% 39.08% 1109ms 7.44% H5D__mpio_select_write 459ms 3.08% 42.16% 1058ms 7.10% H5S_select_iterate 1ms 0.0067% 42.17% 994ms 6.67% PMPI_File_write_at_all 962ms 6.45% 48.62% 966ms 6.48% __GI_pwritev64 7ms 0.047% 48.67% 885ms 5.94% std::pow (inline) 85ms 0.57% 49.24% 877ms 5.88% __pow 69ms 0.46% 49.70% 792ms 5.31% __ieee754_pow_fma 359ms 2.41% 52.11% 783ms 5.25% MonodomainSolver::SetupLinearSystem 1ms 0.0067% 52.12% 712ms 4.78% PCApply 0 0% 52.12% 708ms 4.75% PCApply_BJacobi_Singleblock 1ms 0.0067% 52.12% 672ms 4.51% KSPSolve_PREONLY 1ms 0.0067% 52.13% 666ms 4.47% PCApply_ICC 2ms 0.013% 52.14% 665ms 4.46% MatSolve 652ms 4.37% 56.52% 663ms 4.45% MatSolve_SeqSBAIJ_1_NaturalOrdering 312ms 2.09% 58.61% 662ms 4.44% CellLuoRudy1991FromCellML::VerifyStateVariables 76ms 0.51% 59.12% 620ms 4.16% H5D__chunk_set_sizes 5ms 0.034% 59.15% 615ms 4.13% MatMult 609ms 4.09% 63.24% 610ms 4.09% MatMult_SeqAIJ 0 0% 63.24% 517ms 3.47% KSP_PCApply.lto_priv.7 61ms 0.41% 63.65% 489ms 3.28% H5S_mpio_space_type 398ms 2.67% 66.32% 398ms 2.67% log_inline (inline) 283ms 1.90% 68.22% 292ms 1.96% exp_inline (inline) 131ms 0.88% 69.10% 269ms 1.80% TimeStepper::TimeStepper 0 0% 69.10% 262ms 1.76% KSPConvergedDefault 55ms 0.37% 69.46% 233ms 1.56% __GI___libc_malloc 180ms 1.21% 70.67% 219ms 1.47% _int_malloc 96ms 0.64% 71.32% 199ms 1.33% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 0 0% 71.32% 196ms 1.31% KSP_PCApply 193ms 1.29% 72.61% 193ms 1.29% [libchaste_heart.so] 119ms 0.8% 73.41% 190ms 1.27% top12 (inline) 142ms 0.95% 74.36% 172ms 1.15% AbstractOneStepIvpOdeSolver::Solve 12ms 0.08% 74.44% 171ms 1.15% H5VM_chunk_index 6ms 0.04% 74.48% 167ms 1.12% ompi_datatype_create 10ms 0.067% 74.55% 165ms 1.11% ompi_datatype_destroy 7ms 0.047% 74.60% 162ms 1.09% MPI_Type_free 149ms 1% 75.60% 149ms 1% std::isinf (inline) 0 0% 75.60% 144ms 0.97% Hdf5DataWriter::PutUnlimitedVariable 29ms 0.19% 75.79% 143ms 0.96% __GI___libc_free 126ms 0.85% 76.64% 142ms 0.95% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 6ms 0.04% 76.68% 142ms 0.95% ompi_info_register_framework_params 141ms 0.95% 77.62% 141ms 0.95% TimeStepper::CalculateNextTime 39ms 0.26% 77.88% 141ms 0.95% ompi_datatype_release_args 25ms 0.17% 78.05% 139ms 0.93% AbstractCardiacCell::SetVoltage (partial-inline) 16ms 0.11% 78.16% 136ms 0.91% H5S_set_version 136ms 0.91% 79.07% 136ms 0.91% ddot_ 44ms 0.3% 79.37% 120ms 0.8% H5VM_array_calc 2ms 0.013% 79.38% 120ms 0.8% PMPI_File_set_view 59ms 0.4% 79.77% 119ms 0.8% std::__cxx11::basic_string::basic_string 60ms 0.4% 80.18% 117ms 0.78% H5S_hyper_add_span_element 5ms 0.034% 80.21% 117ms 0.78% PMPI_Type_create_resized 2ms 0.013% 80.22% 114ms 0.76% VecDuplicate 43ms 0.29% 80.51% 114ms 0.76% _int_free 3ms 0.02% 80.53% 112ms 0.75% VecDuplicate_MPI 112ms 0.75% 81.28% 112ms 0.75% __ieee754_log_fma 81ms 0.54% 81.83% 101ms 0.68% AbstractParameterisedSystem::GetAnyVariable 1ms 0.0067% 81.83% 99ms 0.66% ompi_datatype_duplicate 3ms 0.02% 81.85% 96ms 0.64% VecTDot 92ms 0.62% 82.47% 92ms 0.62% __memcpy_avx_unaligned_erms 83ms 0.56% 83.03% 91ms 0.61% AbstractParameterisedSystem::SetAnyVariable 0 0% 83.03% 90ms 0.6% VecTDot_Seq 0 0% 83.03% 90ms 0.6% VecXDot_Seq_Private.constprop.0 33ms 0.22% 83.25% 88ms 0.59% ompi_datatype_set_args 2ms 0.013% 83.26% 86ms 0.58% VecNorm 83ms 0.56% 83.82% 83ms 0.56% H5VM_chunk_index_scaled 17ms 0.11% 83.93% 82ms 0.55% __libc_calloc 46ms 0.31% 84.24% 79ms 0.53% AbstractCardiacCell::GetVoltage (partial-inline) 79ms 0.53% 84.77% 79ms 0.53% H5VM_array_offset_pre 79ms 0.53% 85.30% 79ms 0.53% std::vector::operator[] (inline) 38ms 0.25% 85.56% 77ms 0.52% H5S__hyper_rebuild 6ms 0.04% 85.60% 77ms 0.52% MPI_Type_contiguous 5ms 0.034% 85.63% 77ms 0.52% opal_datatype_create_desc 3ms 0.02% 85.65% 76ms 0.51% VecCreate 0 0% 85.65% 75ms 0.5% H5D__chunk_allocated 2ms 0.013% 85.66% 75ms 0.5% VecNorm_Seq