File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 291ms, 86.87% of 335ms total Dropped 159 nodes (cum <= 1.68ms) flat flat% sum% cum cum% 0 0% 0% 327ms 97.61% __libc_start_call_main 0 0% 0% 327ms 97.61% __libc_start_main_impl 0 0% 0% 327ms 97.61% _start 0 0% 0% 325ms 97.01% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 325ms 97.01% CxxTest::TestRunner::runAllTests 0 0% 0% 325ms 97.01% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 325ms 97.01% main 0 0% 0% 291ms 86.87% CxxTest::RealTestDescription::run 0 0% 0% 291ms 86.87% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 291ms 86.87% CxxTest::TestRunner::runTest (inline) 0 0% 0% 291ms 86.87% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 291ms 86.87% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 287ms 85.67% AbstractCardiacProblem::Solve 0 0% 0% 286ms 85.37% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 266ms 79.40% LinearSystem::Solve 0 0% 0% 265ms 79.10% KSPSolve 0 0% 0% 265ms 79.10% KSPSolve_CG 0 0% 0% 265ms 79.10% KSPSolve_Private 0 0% 0% 170ms 50.75% KSP_PCApply.lto_priv.7 0 0% 0% 170ms 50.75% PCApply 0 0% 0% 170ms 50.75% PCApply_BJacobi_Singleblock 0 0% 0% 145ms 43.28% KSPSolve_PREONLY (partial-inline) 0 0% 0% 135ms 40.30% MatSolve 133ms 39.70% 39.70% 135ms 40.30% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 39.70% 135ms 40.30% PCApply_ICC 0 0% 39.70% 42ms 12.54% MatMult 0 0% 39.70% 42ms 12.54% MatMult_SeqAIJ 42ms 12.54% 52.24% 42ms 12.54% MatMult_SeqAIJ_Inode (inline) 35ms 10.45% 62.69% 35ms 10.45% ddot_ 0 0% 62.69% 31ms 9.25% CxxTest::RealWorldDescription::setUp 0 0% 62.69% 31ms 9.25% PMPI_Init_thread 0 0% 62.69% 31ms 9.25% PetscInitialize 0 0% 62.69% 31ms 9.25% PetscSetup::setUpWorld 0 0% 62.69% 31ms 9.25% PetscSetupUtils::CommonSetup 0 0% 62.69% 31ms 9.25% PetscSetupUtils::InitialisePetsc 0 0% 62.69% 31ms 9.25% ompi_mpi_init 0 0% 62.69% 28ms 8.36% 0 0% 62.69% 26ms 7.76% VecTDot 0 0% 62.69% 26ms 7.76% VecTDot_Seq 0 0% 62.69% 26ms 7.76% VecXDot_Seq_Private.constprop.0 0 0% 62.69% 24ms 7.16% MatNullSpaceRemove 0 0% 62.69% 21ms 6.27% orte_init 0 0% 62.69% 18ms 5.37% VecMDot 18ms 5.37% 68.06% 18ms 5.37% VecMDot_Seq 0 0% 68.06% 18ms 5.37% VecMXDot_Private 0 0% 68.06% 17ms 5.07% AbstractCardiacTissue::SolveCellSystems 0 0% 68.06% 14ms 4.18% hwloc_topology_load 0 0% 68.06% 13ms 3.88% KSP_PCApply (partial-inline) 0 0% 68.06% 13ms 3.88% hwloc_linux_get_tid_last_cpu_location 0 0% 68.06% 12ms 3.58% mca_base_framework_open 0 0% 68.06% 11ms 3.28% mca_base_framework_components_register 0 0% 68.06% 11ms 3.28% mca_base_framework_register 0 0% 68.06% 10ms 2.99% AbstractCardiacCell::ComputeExceptVoltage 0 0% 68.06% 10ms 2.99% VecNorm 0 0% 68.06% 10ms 2.99% __GI__dl_catch_exception 0 0% 68.06% 10ms 2.99% _dl_catch_error 0 0% 68.06% 10ms 2.99% _dlerror_run 0 0% 68.06% 9ms 2.69% VecNorm_Seq 0 0% 68.06% 9ms 2.69% _dl_init 0 0% 68.06% 9ms 2.69% call_init (inline) 0 0% 68.06% 9ms 2.69% opal_stackframe_output 0 0% 68.06% 8ms 2.39% AbstractOneStepIvpOdeSolver::InternalSolve 1ms 0.3% 68.36% 8ms 2.39% __GI___exp 0 0% 68.36% 8ms 2.39% ___dlopen 0 0% 68.36% 8ms 2.39% _dl_open 0 0% 68.36% 8ms 2.39% dl_open_worker 0 0% 68.36% 8ms 2.39% dlopen_doit 0 0% 68.36% 8ms 2.39% dlopen_implementation (inline) 1ms 0.3% 68.66% 7ms 2.09% AbstractCardiacTissue::UpdateCaches (inline) 3ms 0.9% 69.55% 7ms 2.09% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 69.55% 7ms 2.09% EulerIvpOdeSolver::CalculateNextYValue 0 0% 69.55% 7ms 2.09% VecAXPY 0 0% 69.55% 7ms 2.09% VecAXPY_Seq 6ms 1.79% 71.34% 7ms 2.09% __ieee754_exp_fma 0 0% 71.34% 7ms 2.09% _dl_start_user 7ms 2.09% 73.43% 7ms 2.09% daxpy_ 0 0% 73.43% 7ms 2.09% mca_base_component_find 0 0% 73.43% 7ms 2.09% mca_base_component_repository_open 0 0% 73.43% 7ms 2.09% opal_hwloc_base_get_topology 0 0% 73.43% 7ms 2.09% orte_ess_base_proc_binding 0 0% 73.43% 6ms 1.79% CellLuoRudy1991FromCellML::GetIIonic 0 0% 73.43% 6ms 1.79% KSPConvergedDefault 0 0% 73.43% 6ms 1.79% VecMAXPY 6ms 1.79% 75.22% 6ms 1.79% VecMAXPY_Seq 0 0% 75.22% 6ms 1.79% dl_open_worker_begin 0 0% 75.22% 5ms 1.49% VecAYPX 5ms 1.49% 76.72% 5ms 1.49% VecAYPX_Seq 5ms 1.49% 78.21% 5ms 1.49% __GI___libc_read 5ms 1.49% 79.70% 5ms 1.49% __memcpy_avx512_unaligned_erms 0 0% 79.70% 5ms 1.49% _dl_lookup_symbol_x 4ms 1.19% 80.90% 5ms 1.49% do_lookup_x 0 0% 80.90% 5ms 1.49% mca_base_var_group_register 0 0% 80.90% 5ms 1.49% mca_base_var_register 0 0% 80.90% 4ms 1.19% PetscMemcpy (inline) 0 0% 80.90% 4ms 1.19% VecDuplicate 0 0% 80.90% 4ms 1.19% VecDuplicate_Seq 4ms 1.19% 82.09% 4ms 1.19% __memset_avx512_unaligned_erms 0 0% 82.09% 4ms 1.19% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 82.09% 4ms 1.19% boost::serialization::singleton::get_instance 0 0% 82.09% 4ms 1.19% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 82.09% 4ms 1.19% mca_base_component_var_register 0 0% 82.09% 4ms 1.19% mca_base_framework_components_open 0 0% 82.09% 4ms 1.19% mca_topo_base_dist_graph_neighbors_count 0 0% 82.09% 3ms 0.9% AbstractCardiacProblem::Initialise 0 0% 82.09% 3ms 0.9% CxxTest::RealWorldDescription::tearDown 0 0% 82.09% 3ms 0.9% PetscFinalize 0 0% 82.09% 3ms 0.9% PetscMemzero (inline) 0 0% 82.09% 3ms 0.9% PetscSetup::tearDownWorld 0 0% 82.09% 3ms 0.9% PetscSetupUtils::CommonFinalize 0 0% 82.09% 3ms 0.9% VecCopy 0 0% 82.09% 3ms 0.9% VecCopy_Seq (partial-inline) 1ms 0.3% 82.39% 3ms 0.9% VecSet 0 0% 82.39% 3ms 0.9% _dl_fixup 0 0% 82.39% 3ms 0.9% _dl_map_object 0 0% 82.39% 3ms 0.9% _dl_map_object_from_fd 0 0% 82.39% 3ms 0.9% _dl_open_relocate_one_object (inline) 0 0% 82.39% 3ms 0.9% _dl_relocate_object 0 0% 82.39% 3ms 0.9% _dl_runtime_resolve_xsavec 3ms 0.9% 83.28% 3ms 0.9% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 0 0% 83.28% 3ms 0.9% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 83.28% 3ms 0.9% elf_dynamic_do_Rela (inline) 0 0% 83.28% 3ms 0.9% elf_machine_rela (inline) 0 0% 83.28% 3ms 0.9% ompi_mpi_finalize 1ms 0.3% 83.58% 3ms 0.9% resolve_map (inline) 0 0% 83.58% 2ms 0.6% BidomainSolver::SetupLinearSystem 0 0% 83.58% 2ms 0.6% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 83.58% 2ms 0.6% PetscHeaderDestroy_Private 0 0% 83.58% 2ms 0.6% PetscMallocA 0 0% 83.58% 2ms 0.6% PetscMallocAlign (partial-inline) 0 0% 83.58% 2ms 0.6% VecCreate 0 0% 83.58% 2ms 0.6% VecDestroy 0 0% 83.58% 2ms 0.6% VecSet_Seq (partial-inline) 0 0% 83.58% 2ms 0.6% XOpenDisplay 0 0% 83.58% 2ms 0.6% [hwloc_gl.so] 2ms 0.6% 84.18% 2ms 0.6% [libchaste_heart.so] 0 0% 84.18% 2ms 0.6% [libxcb.so.1.1.0] 0 0% 84.18% 2ms 0.6% _XConnectXCB 2ms 0.6% 84.78% 2ms 0.6% __GI___fstatat64 1ms 0.3% 85.07% 2ms 0.6% __GI___libc_malloc 0 0% 85.07% 2ms 0.6% __GI_exit 0 0% 85.07% 2ms 0.6% __GI_getaddrinfo 2ms 0.6% 85.67% 2ms 0.6% __GI_munmap 0 0% 85.67% 2ms 0.6% __cxa_finalize 0 0% 85.67% 2ms 0.6% __dlclose 0 0% 85.67% 2ms 0.6% __ieee754_pow_fma 2ms 0.6% 86.27% 2ms 0.6% __libc_openat64 0 0% 86.27% 2ms 0.6% __pow 0 0% 86.27% 2ms 0.6% __run_exit_handlers 0 0% 86.27% 2ms 0.6% _dl_call_fini 0 0% 86.27% 2ms 0.6% _dl_close 0 0% 86.27% 2ms 0.6% _dl_close_worker (inline) 0 0% 86.27% 2ms 0.6% _dl_fini 0 0% 86.27% 2ms 0.6% _dl_unmap 0 0% 86.27% 2ms 0.6% _dl_unmap_segments (inline) 0 0% 86.27% 2ms 0.6% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 2ms 0.6% 86.87% 2ms 0.6% exp_inline (inline) 0 0% 86.87% 2ms 0.6% mca_base_var_generate_full_name4 0 0% 86.87% 2ms 0.6% opal_init 0 0% 86.87% 2ms 0.6% opal_timer_base_get_freq 0 0% 86.87% 2ms 0.6% std::pow (inline) 0 0% 86.87% 2ms 0.6% xcb_connect_to_display_with_auth_info