File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 110634ms, 91.71% of 120636ms total Dropped 1144 nodes (cum <= 603.18ms) flat flat% sum% cum cum% 0 0% 0% 120624ms 100% __libc_start_call_main 0 0% 0% 120624ms 100% __libc_start_main_impl 0 0% 0% 120624ms 100% _start 0 0% 0% 120622ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 120622ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 120622ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 120622ms 100% main 0 0% 0% 120586ms 100% AbstractConvergenceTester::Converge 0 0% 0% 120586ms 100% CxxTest::RealTestDescription::run 0 0% 0% 120586ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 120586ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 120586ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 120586ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 9ms 0.0075% 0.0075% 119311ms 98.90% AbstractCardiacProblem::Solve 6ms 0.005% 0.012% 118509ms 98.24% AbstractDynamicLinearPdeSolver::Solve 4ms 0.0033% 0.016% 66819ms 55.39% LinearSystem::Solve 0 0% 0.016% 66327ms 54.98% KSPSolve 18ms 0.015% 0.031% 66327ms 54.98% KSPSolve_Private 16ms 0.013% 0.044% 65893ms 54.62% KSPSolve_SYMMLQ 196ms 0.16% 0.21% 42772ms 35.46% AbstractCardiacTissue::SolveCellSystems 5ms 0.0041% 0.21% 37630ms 31.19% PCApply 4ms 0.0033% 0.21% 37616ms 31.18% PCApply_BJacobi_Singleblock 0 0% 0.21% 34673ms 28.74% KSPSolve_PREONLY (partial-inline) 1ms 0.00083% 0.21% 33588ms 27.84% PCApply_ICC 10ms 0.0083% 0.22% 33587ms 27.84% MatSolve 33018ms 27.37% 27.59% 33577ms 27.83% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1448ms 1.20% 28.79% 32944ms 27.31% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0017% 28.79% 32433ms 26.89% KSP_PCApply.lto_priv.18 6664ms 5.52% 34.32% 28352ms 23.50% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 11ms 0.0091% 34.33% 21970ms 18.21% MatMult 235ms 0.19% 34.52% 21959ms 18.20% MatMult_SeqAIJ (partial-inline) 21418ms 17.75% 52.28% 21959ms 18.20% MatMult_SeqAIJ_Inode (inline) 1931ms 1.60% 53.88% 14767ms 12.24% CardiacNewtonSolver::Solve 281ms 0.23% 54.11% 8921ms 7.39% AbstractCardiacTissue::UpdateCaches (inline) 4426ms 3.67% 57.78% 8626ms 7.15% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1920ms 1.59% 59.37% 8439ms 7.00% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1289ms 1.07% 60.44% 7896ms 6.55% BidomainSolver::SetupLinearSystem 1242ms 1.03% 61.47% 7442ms 6.17% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1ms 0.00083% 61.47% 7164ms 5.94% KSP_PCApply (partial-inline) 8ms 0.0066% 61.48% 6596ms 5.47% KSPConvergedDefault 5928ms 4.91% 66.39% 5928ms 4.91% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3890ms 3.22% 69.62% 3931ms 3.26% __ieee754_log_fma 0 0% 69.62% 3778ms 3.13% boost::numeric::ublas::norm_inf (inline) 2531ms 2.10% 71.71% 3778ms 3.13% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 71.71% 3778ms 3.13% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 71.71% 3778ms 3.13% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3491ms 2.89% 74.61% 3491ms 2.89% __memcpy_avx_unaligned_erms 7ms 0.0058% 74.61% 3477ms 2.88% MatNullSpaceRemove 0 0% 74.61% 3444ms 2.85% PetscMemcpy (inline) 23ms 0.019% 74.63% 3152ms 2.61% std::pow (inline) 403ms 0.33% 74.97% 3124ms 2.59% __pow 1787ms 1.48% 76.45% 2972ms 2.46% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 19ms 0.016% 76.46% 2927ms 2.43% VecCopy 3ms 0.0025% 76.47% 2906ms 2.41% VecCopy_Seq (partial-inline) 2735ms 2.27% 78.73% 2735ms 2.27% ddot_ 407ms 0.34% 79.07% 2710ms 2.25% __ieee754_pow_fma 16ms 0.013% 79.08% 2587ms 2.14% VecAXPY 12ms 0.0099% 79.09% 2571ms 2.13% VecAXPY_Seq 2551ms 2.11% 81.21% 2551ms 2.11% daxpy_ 5ms 0.0041% 81.21% 2283ms 1.89% VecDot 0 0% 81.21% 2278ms 1.89% VecDot_Seq 2ms 0.0017% 81.21% 2278ms 1.89% VecXDot_Seq_Private.constprop.0 3ms 0.0025% 81.22% 2073ms 1.72% AbstractFeVolumeIntegralAssembler::DoAssemble 1ms 0.00083% 81.22% 1943ms 1.61% VecMDot 6ms 0.005% 81.22% 1942ms 1.61% VecMXDot_Private 1926ms 1.60% 82.82% 1930ms 1.60% VecMDot_Seq 34ms 0.028% 82.85% 1743ms 1.44% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1518ms 1.26% 84.11% 1567ms 1.30% exp_inline (inline) 4ms 0.0033% 84.11% 1527ms 1.27% VecMAXPY 1514ms 1.26% 85.36% 1523ms 1.26% VecMAXPY_Seq 1458ms 1.21% 86.57% 1458ms 1.21% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 0 0% 86.57% 1423ms 1.18% AbstractFeAssemblerInterface::AssembleMatrix (inline) 1235ms 1.02% 87.60% 1235ms 1.02% __memset_avx2_unaligned_erms 0 0% 87.60% 1233ms 1.02% PetscMemzero (inline) 0 0% 87.60% 1151ms 0.95% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 87.60% 1151ms 0.95% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 87.60% 1151ms 0.95% boost_numeric_ublas_abs (inline) 1151ms 0.95% 88.55% 1151ms 0.95% std::abs (inline) 14ms 0.012% 88.56% 1117ms 0.93% boost::numeric::ublas::matrix_assign (inline) 0 0% 88.56% 1114ms 0.92% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.56% 1114ms 0.92% CuboidMeshConstructor::Construct 1ms 0.00083% 88.56% 1114ms 0.92% DistributedTetrahedralMesh::ConstructCuboid 206ms 0.17% 88.73% 1097ms 0.91% boost::numeric::ublas::indexing_matrix_assign 810ms 0.67% 89.40% 1077ms 0.89% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 89.40% 1010ms 0.84% VecDuplicate 2ms 0.0017% 89.41% 994ms 0.82% Element::Element 1ms 0.00083% 89.41% 981ms 0.81% AbstractTetrahedralElement::CalculateJacobian 9ms 0.0075% 89.41% 966ms 0.8% VecScale 3ms 0.0025% 89.42% 957ms 0.79% VecScale_Seq 949ms 0.79% 90.20% 949ms 0.79% dscal_ 4ms 0.0033% 90.21% 924ms 0.77% AbstractTetrahedralElement::AbstractTetrahedralElement 871ms 0.72% 90.93% 871ms 0.72% [libchaste_heart.so] 8ms 0.0066% 90.94% 849ms 0.7% BidomainAssembler::ComputeMatrixTerm 13ms 0.011% 90.95% 846ms 0.7% PetscMallocA 6ms 0.005% 90.95% 837ms 0.69% boost::numeric::ublas::c_matrix::c_matrix (inline) 5ms 0.0041% 90.96% 833ms 0.69% PetscMallocAlign (partial-inline) 0 0% 90.96% 726ms 0.6% BidomainProblem::WriteOneStep 2ms 0.0017% 90.96% 706ms 0.59% VecNorm 1ms 0.00083% 90.96% 700ms 0.58% AbstractBidomainSolver::FinaliseLinearSystem 699ms 0.58% 91.54% 699ms 0.58% log_inline (inline) 1ms 0.00083% 91.54% 698ms 0.58% VecNorm_Seq 203ms 0.17% 91.71% 696ms 0.58% AbstractBidomainSolver::CheckCompatibilityCondition 3ms 0.0025% 91.71% 674ms 0.56% VecDuplicate_Seq 0 0% 91.71% 650ms 0.54% AbstractFeAssemblerInterface::Assemble (inline)