File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12711ms, 85.48% of 14871ms total Dropped 770 nodes (cum <= 74.36ms) flat flat% sum% cum cum% 0 0% 0% 14862ms 99.94% __libc_start_call_main 0 0% 0% 14862ms 99.94% __libc_start_main_impl 0 0% 0% 14862ms 99.94% _start 0 0% 0% 14859ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14859ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14859ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14859ms 99.92% main 0 0% 0% 14824ms 99.68% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14824ms 99.68% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14824ms 99.68% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0067% 0.0067% 14803ms 99.54% AbstractCardiacProblem::Solve 4ms 0.027% 0.034% 11497ms 77.31% AbstractDynamicLinearPdeSolver::Solve 38ms 0.26% 0.29% 9204ms 61.89% AbstractCardiacTissue::SolveCellSystems 127ms 0.85% 1.14% 5664ms 38.09% AbstractCardiacCell::ComputeExceptVoltage 165ms 1.11% 2.25% 4928ms 33.14% AbstractOneStepIvpOdeSolver::InternalSolve 193ms 1.30% 3.55% 4209ms 28.30% EulerIvpOdeSolver::CalculateNextYValue 949ms 6.38% 9.93% 3968ms 26.68% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1742ms 11.71% 21.65% 3660ms 24.61% __GI___exp 3ms 0.02% 21.67% 3247ms 21.83% MonodomainProblem::WriteOneStep 0 0% 21.67% 3099ms 20.84% Hdf5DataWriter::PutVector 1ms 0.0067% 21.67% 3077ms 20.69% H5Dwrite 1ms 0.0067% 21.68% 3045ms 20.48% H5D__write 94ms 0.63% 22.31% 2692ms 18.10% AbstractCardiacTissue::UpdateCaches (inline) 818ms 5.50% 27.81% 2562ms 17.23% CellLuoRudy1991FromCellML::GetIIonic 1693ms 11.38% 39.20% 1834ms 12.33% __ieee754_exp_fma 0 0% 39.20% 1802ms 12.12% H5D__chunk_collective_write 11ms 0.074% 39.27% 1802ms 12.12% H5F_set_coll_metadata_reads 22ms 0.15% 39.42% 1628ms 10.95% H5FD_s3comms_uriencode 2ms 0.013% 39.43% 1499ms 10.08% LinearSystem::Solve 0 0% 39.43% 1361ms 9.15% KSPSolve 7ms 0.047% 39.48% 1361ms 9.15% KSPSolve_Private 1ms 0.0067% 39.49% 1341ms 9.02% KSPSolve_CG 1ms 0.0067% 39.49% 1247ms 8.39% H5F_block_write 2ms 0.013% 39.51% 1246ms 8.38% H5PB_write 3ms 0.02% 39.53% 1244ms 8.37% H5FD_write 0 0% 39.53% 1244ms 8.37% H5F__accum_write 48ms 0.32% 39.85% 1242ms 8.35% 1ms 0.0067% 39.86% 1161ms 7.81% H5D__mpio_select_write 8ms 0.054% 39.91% 1149ms 7.73% H5D__chunk_cacheable 1ms 0.0067% 39.92% 1061ms 7.13% PMPI_File_write_at_all 1028ms 6.91% 46.83% 1031ms 6.93% __GI_pwritev64 404ms 2.72% 49.55% 983ms 6.61% H5S_select_iterate 5ms 0.034% 49.58% 877ms 5.90% std::pow (inline) 88ms 0.59% 50.17% 872ms 5.86% __pow 91ms 0.61% 50.78% 784ms 5.27% __ieee754_pow_fma 350ms 2.35% 53.14% 769ms 5.17% MonodomainSolver::SetupLinearSystem 2ms 0.013% 53.15% 686ms 4.61% PCApply 2ms 0.013% 53.16% 680ms 4.57% PCApply_BJacobi_Singleblock 333ms 2.24% 55.40% 667ms 4.49% CellLuoRudy1991FromCellML::VerifyStateVariables 1ms 0.0067% 55.41% 644ms 4.33% KSPSolve_PREONLY 3ms 0.02% 55.43% 642ms 4.32% MatSolve 0 0% 55.43% 642ms 4.32% PCApply_ICC 634ms 4.26% 59.69% 639ms 4.30% MatSolve_SeqSBAIJ_1_NaturalOrdering 4ms 0.027% 59.72% 633ms 4.26% MatMult 628ms 4.22% 63.94% 629ms 4.23% MatMult_SeqAIJ 68ms 0.46% 64.40% 587ms 3.95% H5D__chunk_set_sizes 3ms 0.02% 64.42% 514ms 3.46% KSP_PCApply.lto_priv.7 56ms 0.38% 64.80% 464ms 3.12% H5S_mpio_space_type 364ms 2.45% 67.24% 364ms 2.45% log_inline (inline) 284ms 1.91% 69.15% 291ms 1.96% exp_inline (inline) 133ms 0.89% 70.05% 255ms 1.71% TimeStepper::TimeStepper 4ms 0.027% 70.08% 247ms 1.66% KSPConvergedDefault 41ms 0.28% 70.35% 220ms 1.48% __GI___libc_malloc 172ms 1.16% 71.51% 205ms 1.38% _int_malloc 92ms 0.62% 72.13% 187ms 1.26% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 120ms 0.81% 72.93% 184ms 1.24% top12 (inline) 18ms 0.12% 73.05% 182ms 1.22% H5VM_chunk_index 0 0% 73.05% 175ms 1.18% KSP_PCApply 175ms 1.18% 74.23% 175ms 1.18% [libchaste_heart.so] 4ms 0.027% 74.26% 159ms 1.07% ompi_datatype_create 128ms 0.86% 75.12% 156ms 1.05% AbstractOneStepIvpOdeSolver::Solve 156ms 1.05% 76.17% 156ms 1.05% std::isinf (inline) 150ms 1.01% 77.18% 150ms 1.01% TimeStepper::CalculateNextTime 149ms 1.00% 78.18% 149ms 1.00% ddot_ 1ms 0.0067% 78.19% 145ms 0.98% Hdf5DataWriter::PutUnlimitedVariable 124ms 0.83% 79.02% 142ms 0.95% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 8ms 0.054% 79.07% 138ms 0.93% ompi_datatype_destroy 27ms 0.18% 79.25% 137ms 0.92% AbstractCardiacCell::SetVoltage (partial-inline) 24ms 0.16% 79.42% 136ms 0.91% __GI___libc_free 9ms 0.061% 79.48% 135ms 0.91% MPI_Type_free 18ms 0.12% 79.60% 134ms 0.9% H5S_set_version 5ms 0.034% 79.63% 117ms 0.79% VecNorm 49ms 0.33% 79.96% 116ms 0.78% H5VM_array_calc 6ms 0.04% 80.00% 116ms 0.78% ompi_info_register_framework_params 3ms 0.02% 80.02% 113ms 0.76% PMPI_File_set_view 27ms 0.18% 80.20% 113ms 0.76% ompi_datatype_release_args 45ms 0.3% 80.51% 112ms 0.75% _int_free 41ms 0.28% 80.78% 111ms 0.75% std::__cxx11::basic_string::basic_string 0 0% 80.78% 110ms 0.74% VecDuplicate 3ms 0.02% 80.80% 110ms 0.74% VecDuplicate_MPI 85ms 0.57% 81.37% 105ms 0.71% AbstractParameterisedSystem::GetAnyVariable 50ms 0.34% 81.71% 104ms 0.7% H5S_hyper_add_span_element 104ms 0.7% 82.41% 104ms 0.7% __ieee754_log_fma 1ms 0.0067% 82.42% 103ms 0.69% VecNorm_Seq 96ms 0.65% 83.06% 96ms 0.65% H5VM_chunk_index_scaled 93ms 0.63% 83.69% 93ms 0.63% __memcpy_avx_unaligned_erms 1ms 0.0067% 83.69% 90ms 0.61% PMPI_Type_create_resized 73ms 0.49% 84.18% 89ms 0.6% AbstractParameterisedSystem::SetAnyVariable 30ms 0.2% 84.39% 89ms 0.6% ompi_datatype_set_args 40ms 0.27% 84.65% 88ms 0.59% AbstractCardiacCell::GetVoltage (partial-inline) 36ms 0.24% 84.90% 86ms 0.58% TimeStepper::AdvanceOneTimeStep 84ms 0.56% 85.46% 84ms 0.56% [libm.so.6] 0 0% 85.46% 84ms 0.56% ompi_datatype_duplicate 2ms 0.013% 85.48% 78ms 0.52% VecTDot 0 0% 85.48% 75ms 0.5% VecTDot_Seq 0 0% 85.48% 75ms 0.5% VecXDot_Seq_Private.constprop.0