File: Test2dVertexBasedSimulationWithFreeBoundary Type: cpu Showing nodes accounting for 47400ms, 81.67% of 58042ms total Dropped 1206 nodes (cum <= 290.21ms) flat flat% sum% cum cum% 0 0% 0% 56223ms 96.87% __libc_start_call_main 0 0% 0% 56223ms 96.87% __libc_start_main_impl 0 0% 0% 56223ms 96.87% _start 0 0% 0% 56207ms 96.84% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 56207ms 96.84% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 56207ms 96.84% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 56207ms 96.84% main 0 0% 0% 56164ms 96.76% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 56164ms 96.76% CxxTest::TestRunner::runTest (inline) 0 0% 0% 56164ms 96.76% Test2DVertexSimulationWithFreeBoundary::Test2DFreeBoundaryVertexSimulationForProfiling 0 0% 0% 54554ms 93.99% AbstractCellBasedSimulation::Solve 1ms 0.0017% 0.0017% 25656ms 44.20% AbstractCellPopulation::WriteResultsToFiles 1ms 0.0017% 0.0034% 19680ms 33.91% VertexBasedCellPopulation::WriteVtkResultsToFile 11ms 0.019% 0.022% 19331ms 33.31% VertexBasedCellPopulation::WriteCellVtkResultsToFile 1ms 0.0017% 0.024% 17035ms 29.35% VertexMeshWriter::WriteVtkUsingMesh 4ms 0.0069% 0.031% 16229ms 27.96% OffLatticeSimulation::UpdateCellLocationsAndTopology 2ms 0.0034% 0.034% 15735ms 27.11% ForwardEulerNumericalMethod::UpdateAllNodePositions 19ms 0.033% 0.067% 15469ms 26.65% AbstractNumericalMethod::ComputeForcesIncludingDamping 13ms 0.022% 0.09% 13133ms 22.63% VertexMeshWriter::MakeVtkMesh 0 0% 0.09% 11860ms 20.43% AbstractCellBasedSimulation::UpdateCellPopulation 105ms 0.18% 0.27% 11680ms 20.12% FarhadifarForce::AddForceContribution 1ms 0.0017% 0.27% 11086ms 19.10% VertexBasedCellPopulation::Update 0 0% 0.27% 11020ms 18.99% MutableVertexMesh::ReMesh 2ms 0.0034% 0.28% 9358ms 16.12% vtkPolygon::New 5ms 0.0086% 0.28% 9350ms 16.11% vtkPolygon::vtkPolygon 42ms 0.072% 0.36% 6397ms 11.02% vtkCell::vtkCell 158ms 0.27% 0.63% 6333ms 10.91% MutableVertexMesh::CheckForIntersections 11ms 0.019% 0.65% 5643ms 9.72% vtkPoints::New 385ms 0.66% 1.31% 5452ms 9.39% operator new 85ms 0.15% 1.46% 5320ms 9.17% vtkPoints::vtkPoints 1517ms 2.61% 4.07% 5135ms 8.85% __GI___libc_malloc 186ms 0.32% 4.39% 5111ms 8.81% boost::numeric::ublas::c_vector::c_vector (partial-inline) 65ms 0.11% 4.50% 4761ms 8.20% CellPropertyCollection::GetPropertiesType (inline) 300ms 0.52% 5.02% 4715ms 8.12% VertexMesh::GetVectorFromAtoB 63ms 0.11% 5.13% 4463ms 7.69% boost::numeric::ublas::vector_assign (inline) 101ms 0.17% 5.30% 4462ms 7.69% FarhadifarForce::GetLineTensionParameter 10ms 0.017% 5.32% 4327ms 7.45% vtkQuad::New 28ms 0.048% 5.37% 4305ms 7.42% vtkQuad::vtkQuad 8ms 0.014% 5.38% 4183ms 7.21% vtkLine::New 84ms 0.14% 5.53% 4097ms 7.06% vtkLine::vtkLine 12ms 0.021% 5.55% 4073ms 7.02% vtkTriangle::New 57ms 0.098% 5.65% 4039ms 6.96% vtkTriangle::vtkTriangle 1217ms 2.10% 7.74% 3941ms 6.79% __GI___libc_free 9ms 0.016% 7.76% 3884ms 6.69% AbstractCellProperty::IsSubType (inline) 962ms 1.66% 9.42% 3869ms 6.67% __dynamic_cast 0 0% 9.42% 3729ms 6.42% vtkXMLWriterBase::Write 2ms 0.0034% 9.42% 3728ms 6.42% vtkStreamingDemandDrivenPipeline::Update 0 0% 9.42% 3701ms 6.38% vtkDemandDrivenPipeline::ProcessRequest 2ms 0.0034% 9.42% 3689ms 6.36% vtkStreamingDemandDrivenPipeline::ProcessRequest 0 0% 9.42% 3669ms 6.32% vtkExecutive::CallAlgorithm 0 0% 9.42% 3667ms 6.32% vtkDemandDrivenPipeline::ExecuteData 0 0% 9.42% 3662ms 6.31% vtkCompositeDataPipeline::ExecuteData 2ms 0.0034% 9.43% 3658ms 6.30% vtkXMLUnstructuredDataWriter::ProcessRequest 30ms 0.052% 9.48% 3629ms 6.25% VertexBasedCellPopulation::GetDampingConstant 984ms 1.70% 11.17% 3533ms 6.09% boost::numeric::ublas::indexing_vector_assign 225ms 0.39% 11.56% 3461ms 5.96% vtkPoints::SetDataType 477ms 0.82% 12.38% 3325ms 5.73% std::__new_allocator::allocate (inline) 13ms 0.022% 12.40% 3237ms 5.58% vtkPolygon::~vtkPolygon 0 0% 12.40% 3236ms 5.58% std::allocator_traits::allocate (inline) 470ms 0.81% 13.21% 3233ms 5.57% VertexMesh::ElementIncludesPoint 5ms 0.0086% 13.22% 3204ms 5.52% MutableVertexMesh::RemoveDeletedNodesAndElements 621ms 1.07% 14.29% 3130ms 5.39% std::_Rb_tree::_M_erase 0 0% 14.29% 2969ms 5.12% std::_Rb_tree::_M_create_node (inline) 1ms 0.0017% 14.29% 2947ms 5.08% vtkXMLUnstructuredDataWriter::WriteAPiece 0 0% 14.29% 2946ms 5.08% vtkXMLUnstructuredGridWriter::WriteAppendedPieceData 284ms 0.49% 14.78% 2767ms 4.77% std::ostream::_M_insert 1ms 0.0017% 14.79% 2760ms 4.76% std::ostream::operator<< (inline) 0 0% 14.79% 2740ms 4.72% std::_Rb_tree::_M_get_node (inline) 2326ms 4.01% 18.79% 2701ms 4.65% _int_free 1584ms 2.73% 21.52% 2681ms 4.62% _int_malloc 160ms 0.28% 21.80% 2660ms 4.58% std::_Rb_tree::~_Rb_tree (inline) 74ms 0.13% 21.93% 2653ms 4.57% std::__new_allocator::deallocate (inline) 0 0% 21.93% 2645ms 4.56% std::allocator_traits::deallocate (inline) 0 0% 21.93% 2624ms 4.52% std::_Rb_tree::_Alloc_node::operator() (inline) 0 0% 21.93% 2610ms 4.50% std::_Rb_tree::_M_drop_node (inline) 22ms 0.038% 21.96% 2589ms 4.46% Cell::GetMutationState 0 0% 21.96% 2572ms 4.43% std::set::~set (inline) 73ms 0.13% 22.09% 2548ms 4.39% vtkCell::~vtkCell 85ms 0.15% 22.24% 2505ms 4.32% std::_Rb_tree::_Rb_tree (partial-inline) 0 0% 22.24% 2485ms 4.28% std::_Rb_tree::_M_put_node (inline) 152ms 0.26% 22.50% 2448ms 4.22% boost::numeric::ublas::c_vector::operator= (inline) 2392ms 4.12% 26.62% 2392ms 4.12% __strcmp_evex 135ms 0.23% 26.85% 2373ms 4.09% VertexMesh::GetNextEdgeGradientOfElementAtNode 0 0% 26.85% 2364ms 4.07% vtkXMLWriter::WriteBinaryData 9ms 0.016% 26.87% 2357ms 4.06% std::set::set (inline) 3ms 0.0052% 26.87% 2339ms 4.03% vtkXMLWriter::WriteBinaryDataInternal 0 0% 26.87% 2326ms 4.01% vtkXMLWriter::WriteBinaryDataBlock 269ms 0.46% 27.34% 2302ms 3.97% std::_Rb_tree::_M_copy (inline) 54ms 0.093% 27.43% 2265ms 3.90% vtkBase64OutputStream::Write 2264ms 3.90% 31.33% 2264ms 3.90% __memcpy_avx512_unaligned_erms 183ms 0.32% 31.64% 2243ms 3.86% std::map::operator[] (partial-inline) 219ms 0.38% 32.02% 2189ms 3.77% vtkBase64OutputStream::EncodeTriplet 1ms 0.0017% 32.02% 2181ms 3.76% NodeLocationWriter::VisitAnyPopulation 60ms 0.1% 32.13% 2160ms 3.72% std::__copy_move::__copy_m (inline) 0 0% 32.13% 2160ms 3.72% std::__copy_move_a (inline) 0 0% 32.13% 2160ms 3.72% std::__copy_move_a1 (inline) 0 0% 32.13% 2160ms 3.72% std::__copy_move_a2 (inline) 0 0% 32.13% 2160ms 3.72% std::copy (inline) 276ms 0.48% 32.60% 2138ms 3.68% AbstractMesh::GetVectorFromAtoB 512ms 0.88% 33.48% 2120ms 3.65% vtkAOSDataArrayTemplate::vtkAOSDataArrayTemplate 8ms 0.014% 33.50% 2112ms 3.64% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 33.50% 2112ms 3.64% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 4ms 0.0069% 33.51% 2108ms 3.63% MutableVertexMesh::RemoveDeletedNodes 131ms 0.23% 33.73% 2089ms 3.60% MutableElement::ResetIndex 16ms 0.028% 33.76% 2045ms 3.52% EdgeHelper::RemoveDeletedEdges 1ms 0.0017% 33.76% 2031ms 3.50% vtkXMLUnstructuredDataWriter::WriteAppendedPieceData 292ms 0.5% 34.26% 1964ms 3.38% std::_Rb_tree::_M_clone_node (inline) 122ms 0.21% 34.47% 1926ms 3.32% std::num_put::_M_insert_float 9ms 0.016% 34.49% 1908ms 3.29% EdgeHelper::UpdateEdgesMapKey 11ms 0.019% 34.51% 1894ms 3.26% tbb::detail::r1::parallel_pipeline 545ms 0.94% 35.45% 1867ms 3.22% AbstractMesh::GetDistanceBetweenNodes (partial-inline) 974ms 1.68% 37.12% 1866ms 3.21% __cxxabiv1::__si_class_type_info::__do_dyncast 526ms 0.91% 38.03% 1793ms 3.09% std::ostream::write 0 0% 38.03% 1788ms 3.08% clone3 0 0% 38.03% 1788ms 3.08% start_thread 0 0% 38.03% 1743ms 3.00% boost::numeric::ublas::norm_2 (inline) 1408ms 2.43% 40.46% 1735ms 2.99% boost::numeric::ublas::vector_norm_2::apply (partial-inline) 8ms 0.014% 40.47% 1706ms 2.94% AbstractCellPopulation::AcceptCellWritersAcrossPopulation 740ms 1.27% 41.75% 1684ms 2.90% std::_Rb_tree::_M_lower_bound (inline) 60ms 0.1% 41.85% 1682ms 2.90% AbstractCellPopulation::GetCellUsingLocationIndex 11ms 0.019% 41.87% 1670ms 2.88% tbb::detail::r1::reset 54ms 0.093% 41.96% 1653ms 2.85% vtkPoints::~vtkPoints 0 0% 41.96% 1606ms 2.77% VoronoiVertexMeshGenerator::GenerateVoronoiMesh 0 0% 41.96% 1606ms 2.77% VoronoiVertexMeshGenerator::VoronoiVertexMeshGenerator 1094ms 1.88% 43.85% 1601ms 2.76% VoronoiVertexMeshGenerator::CreateVoronoiTessellation 761ms 1.31% 45.16% 1572ms 2.71% tbb::detail::r1::wait_bounded_queue_monitor 24ms 0.041% 45.20% 1557ms 2.68% std::__cxx11::collate::do_transform 6ms 0.01% 45.21% 1504ms 2.59% ___vsnprintf 1504ms 2.59% 47.80% 1504ms 2.59% boost::numeric::ublas::same_impl_ex 2ms 0.0034% 47.80% 1498ms 2.58% __vsnprintf_internal (inline) 142ms 0.24% 48.05% 1479ms 2.55% __printf_buffer 24ms 0.041% 48.09% 1479ms 2.55% std::_Rb_tree::erase 12ms 0.021% 48.11% 1463ms 2.52% Cell::GetCellProliferativeType 1435ms 2.47% 50.58% 1435ms 2.47% boost::numeric::ublas::c_vector::operator() 15ms 0.026% 50.61% 1432ms 2.47% VertexBasedCellPopulation::AcceptCellWriter 19ms 0.033% 50.64% 1429ms 2.46% vtkQuad::~vtkQuad 0 0% 50.64% 1427ms 2.46% std::_Rb_tree::lower_bound (inline) 0 0% 50.64% 1427ms 2.46% std::map::lower_bound (inline) 0 0% 50.64% 1420ms 2.45% std::set::insert (inline) 10ms 0.017% 50.66% 1396ms 2.41% vtkTriangle::~vtkTriangle 43ms 0.074% 50.73% 1386ms 2.39% vtkIdList::AllocateInternal 8ms 0.014% 50.75% 1345ms 2.32% vtkLine::GetParametricCenter 8ms 0.014% 50.76% 1278ms 2.20% vtkTypeFloat64Array::~vtkTypeFloat64Array 2ms 0.0034% 50.76% 1264ms 2.18% __printf_fp_spec (inline) 21ms 0.036% 50.80% 1262ms 2.17% __printf_fp_l_buffer 7ms 0.012% 50.81% 1259ms 2.17% CellPopulationElementWriter::Visit 41ms 0.071% 50.88% 1244ms 2.14% std::set_intersection (inline) 108ms 0.19% 51.07% 1226ms 2.11% std::_Rb_tree::_M_insert_ (inline) 431ms 0.74% 51.81% 1214ms 2.09% __printf_fp_buffer_1 61ms 0.11% 51.92% 1203ms 2.07% std::__set_intersection 8ms 0.014% 51.93% 1189ms 2.05% vtkDataArray::CreateDataArray 37ms 0.064% 51.99% 1177ms 2.03% vtkFloatArray::New 17ms 0.029% 52.02% 1166ms 2.01% Cell::GetCellData 1ms 0.0017% 52.02% 1156ms 1.99% vtkXMLWriter::WritePointsAppendedData 261ms 0.45% 52.47% 1140ms 1.96% boost::numeric::ublas::vector_binary::size (inline) 529ms 0.91% 53.39% 1138ms 1.96% std::basic_filebuf::xsputn 53ms 0.091% 53.48% 1120ms 1.93% vtkTypeFloat64Array::New 21ms 0.036% 53.51% 1104ms 1.90% vtkDoubleArray::vtkDoubleArray 617ms 1.06% 54.58% 1077ms 1.86% std::_Rb_tree::equal_range (inline) 14ms 0.024% 54.60% 1037ms 1.79% vtkFloatArray::vtkFloatArray 31ms 0.053% 54.65% 990ms 1.71% vtkFloatArray::~vtkFloatArray 0 0% 54.65% 986ms 1.70% boost::numeric::ublas::c_vector::assign (inline) 4ms 0.0069% 54.66% 964ms 1.66% LegacyCellProliferativeTypesWriter::VisitCell 959ms 1.65% 56.31% 959ms 1.65% std::_Rb_tree::_S_right (inline) 24ms 0.041% 56.35% 957ms 1.65% vtkTypeFloat64Array::vtkTypeFloat64Array 19ms 0.033% 56.39% 944ms 1.63% CellPropertyCollection::HasProperty 11ms 0.019% 56.41% 940ms 1.62% LegacyCellProliferativeTypesWriter::GetCellDataForVtkOutput 0 0% 56.41% 935ms 1.61% Cell::HasCellProperty (inline) 429ms 0.74% 57.14% 935ms 1.61% vtkTypeFloat64Array::PrintSelf 14ms 0.024% 57.17% 930ms 1.60% AbstractCellProperty::IsType (inline) 191ms 0.33% 57.50% 913ms 1.57% vtkObject::vtkObject 0 0% 57.50% 912ms 1.57% std::insert_iterator::operator= (inline) 1ms 0.0017% 57.50% 887ms 1.53% vtkXMLUnstructuredDataWriter::WriteCellsAppendedDataWorker 118ms 0.2% 57.70% 870ms 1.50% std::vector::_M_default_append (partial-inline) 0 0% 57.70% 859ms 1.48% vtkXMLWriter::WriteCellDataAppendedData 61ms 0.11% 57.81% 854ms 1.47% std::_Rb_tree_const_iterator::operator++ (inline) 0 0% 57.81% 839ms 1.45% boost::numeric::ublas::c_vector::operator-= (inline) 1ms 0.0017% 57.81% 836ms 1.44% tcache_get (inline) 835ms 1.44% 59.25% 835ms 1.44% tcache_get_n (inline) 799ms 1.38% 60.63% 799ms 1.38% __GI_sched_yield 238ms 0.41% 61.04% 793ms 1.37% vtkAOSDataArrayTemplate::DataElementChanged 2ms 0.0034% 61.04% 785ms 1.35% std::_Rb_tree::_M_insert_unique_ (inline) 11ms 0.019% 61.06% 776ms 1.34% AbstractTargetAreaModifier::UpdateTargetAreas 3ms 0.0052% 61.06% 761ms 1.31% TargetAreaLinearGrowthModifier::UpdateTargetAreaOfCell 488ms 0.84% 61.90% 739ms 1.27% vtkObjectBase::UnRegisterInternal 183ms 0.32% 62.22% 734ms 1.26% AbstractElement::GetNodeLocation 0 0% 62.22% 724ms 1.25% boost::numeric::ublas::scalar_traits::type_sqrt (inline) 720ms 1.24% 63.46% 720ms 1.24% std::_Rb_tree_increment 197ms 0.34% 63.80% 717ms 1.24% vtkObject::Modified 20ms 0.034% 63.83% 674ms 1.16% Node::RemoveElement 4ms 0.0069% 63.84% 659ms 1.14% AbstractCellPopulation::Iterator::operator++ (inline) 4ms 0.0069% 63.85% 657ms 1.13% std::set::erase (inline) 29ms 0.05% 63.90% 651ms 1.12% AbstractCellPopulation::Iterator::IsRealCell (inline) 103ms 0.18% 64.07% 651ms 1.12% AbstractCellProperty::IsSame 439ms 0.76% 64.83% 649ms 1.12% std::_Hashtable::clear 103ms 0.18% 65.01% 639ms 1.10% VertexMesh::GetAreaGradientOfElementAtNode 2ms 0.0034% 65.01% 639ms 1.10% std::_Rb_tree::_M_insert_unique (inline) 0 0% 65.01% 630ms 1.09% std::_Rb_tree::clear (inline) 13ms 0.022% 65.03% 623ms 1.07% std::_Rb_tree::_M_emplace_hint_unique 0 0% 65.03% 609ms 1.05% std::map::clear (inline) 56ms 0.096% 65.13% 598ms 1.03% vtkDoubleArray::~vtkDoubleArray 4ms 0.0069% 65.14% 591ms 1.02% vtkIdList::Allocate 54ms 0.093% 65.23% 585ms 1.01% VertexMesh::GetVolumeOfElement 106ms 0.18% 65.41% 578ms 1% boost::numeric::ublas::c_vector::operator[] (inline) 230ms 0.4% 65.81% 573ms 0.99% hack_digit 33ms 0.057% 65.87% 570ms 0.98% boost::numeric::ublas::vector_reference::operator() (inline) 10ms 0.017% 65.88% 560ms 0.96% VertexBasedCellPopulation::IsCellAssociatedWithADeletedLocation 495ms 0.85% 66.74% 558ms 0.96% malloc_consolidate 375ms 0.65% 67.38% 552ms 0.95% std::basic_streambuf::xsputn 124ms 0.21% 67.60% 548ms 0.94% std::type_info::operator== (inline) 547ms 0.94% 68.54% 547ms 0.94% tcache_put (inline) 0 0% 68.54% 539ms 0.93% boost::numeric::ublas::vector_binary::operator() (inline) 499ms 0.86% 69.40% 499ms 0.86% [libchaste_cell_based.so] 497ms 0.86% 70.25% 497ms 0.86% [libchaste_mesh.so] 46ms 0.079% 70.33% 490ms 0.84% vtkDataArray::vtkDataArray 489ms 0.84% 71.18% 489ms 0.84% vtkTimeStamp::Modified 20ms 0.034% 71.21% 480ms 0.83% MutableVertexMesh::CheckForSwapsFromShortEdges 2ms 0.0034% 71.21% 479ms 0.83% boost::numeric::ublas::detail::expression_type_check (inline) 165ms 0.28% 71.50% 474ms 0.82% boost::detail::shared_count::~shared_count (inline) 0 0% 71.50% 474ms 0.82% boost::shared_ptr::~shared_ptr (inline) 45ms 0.078% 71.58% 472ms 0.81% boost::numeric::ublas::detail::equals 132ms 0.23% 71.80% 445ms 0.77% std::__ostream_insert 0 0% 71.80% 443ms 0.76% vtkDataArray::ComputeRange 6ms 0.01% 71.81% 442ms 0.76% AbstractCellBasedSimulation::DoCellBirth 7ms 0.012% 71.83% 438ms 0.75% VertexMesh::GetSurfaceAreaOfElement 27ms 0.047% 71.87% 437ms 0.75% VertexBasedCellPopulation::GetElementCorrespondingToCell (inline) 138ms 0.24% 72.11% 436ms 0.75% vtkAbstractArray::vtkAbstractArray 5ms 0.0086% 72.12% 434ms 0.75% AbstractCellPopulation::GetLocationIndexUsingCell 22ms 0.038% 72.16% 419ms 0.72% std::less::operator() (inline) 413ms 0.71% 72.87% 413ms 0.71% [libstdc++.so.6.0.33] 48ms 0.083% 72.95% 413ms 0.71% std::_Rb_tree::_M_upper_bound (inline) 406ms 0.7% 73.65% 406ms 0.7% [libvtkCommonCore-9.3.so.9.3] 80ms 0.14% 73.79% 400ms 0.69% std::num_put::_M_insert_int 336ms 0.58% 74.37% 397ms 0.68% std::operator< (inline) 396ms 0.68% 75.05% 396ms 0.68% Node::GetIndex 3ms 0.0052% 75.05% 392ms 0.68% CellProliferativeTypesWriter::VisitCell 392ms 0.68% 75.73% 392ms 0.68% Node::rGetLocation 1ms 0.0017% 75.73% 386ms 0.67% std::__basic_file::xsputn_2 49ms 0.084% 75.82% 386ms 0.67% tbb::detail::r1::cancel_group_execution 0 0% 75.82% 382ms 0.66% vtk::detail::smp::vtkSMPToolsImplForTBB 380ms 0.65% 76.47% 380ms 0.65% __GI___writev 22ms 0.038% 76.51% 380ms 0.65% std::_Rb_tree::_M_erase_aux (inline) 0 0% 76.51% 369ms 0.64% boost::numeric::ublas::norm_inf (inline) 125ms 0.22% 76.72% 369ms 0.64% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 76.72% 366ms 0.63% std::_Vector_base::_M_allocate (inline) 32ms 0.055% 76.78% 351ms 0.6% vtkIdList::New 0 0% 76.78% 345ms 0.59% std::_Rb_tree::_Auto_node::_Auto_node (inline) 1ms 0.0017% 76.78% 344ms 0.59% AbstractCellPopulation::OpenRoundRobinWritersFilesForAppend 0 0% 76.78% 343ms 0.59% AbstractCellBasedWriter::OpenOutputFileForAppend 52ms 0.09% 76.87% 343ms 0.59% vtkDataArrayPrivate::DoComputeVectorRange 0 0% 76.87% 340ms 0.59% boost::numeric::ublas::c_vector::assign_temporary (inline) 4ms 0.0069% 76.88% 340ms 0.59% boost::numeric::ublas::c_vector::swap (inline) 3ms 0.0052% 76.88% 336ms 0.58% std::basic_filebuf::open 28ms 0.048% 76.93% 336ms 0.58% std::swap_ranges (inline) 1ms 0.0017% 76.93% 335ms 0.58% OutputFileHandler::OpenOutputFile 71ms 0.12% 77.05% 335ms 0.58% vtkSOADataArrayTemplate::FillTypedComponent 334ms 0.58% 77.63% 334ms 0.58% std::vector::size (inline) 3ms 0.0052% 77.64% 330ms 0.57% std::operator<< (partial-inline) 0 0% 77.64% 329ms 0.57% AbstractCellBasedSimulation::DoCellRemoval (inline) 325ms 0.56% 78.20% 327ms 0.56% vtkObjectBase::Delete 57ms 0.098% 78.29% 326ms 0.56% vtkDataArray::~vtkDataArray 5ms 0.0086% 78.30% 325ms 0.56% std::basic_filebuf::overflow 323ms 0.56% 78.86% 323ms 0.56% std::ostream::sentry::sentry 3ms 0.0052% 78.86% 320ms 0.55% std::basic_filebuf::_M_convert_to_external 5ms 0.0086% 78.87% 316ms 0.54% std::__basic_file::xsputn 7ms 0.012% 78.88% 313ms 0.54% CellProliferativeTypesWriter::GetCellDataForVtkOutput 306ms 0.53% 79.41% 309ms 0.53% __GI___libc_write 0 0% 79.41% 308ms 0.53% std::iter_swap (inline) 308ms 0.53% 79.94% 308ms 0.53% std::swap (inline) 304ms 0.52% 80.47% 304ms 0.52% std::_Rb_tree_insert_and_rebalance 67ms 0.12% 80.58% 302ms 0.52% vtkIdList::~vtkIdList 4ms 0.0069% 80.59% 301ms 0.52% T2SwapCellKiller::CheckAndLabelCellsForApoptosisOrDeath 27ms 0.047% 80.63% 300ms 0.52% CellPropertyCollection::AddProperty 297ms 0.51% 81.15% 297ms 0.51% operator delete 281ms 0.48% 81.63% 296ms 0.51% boost::detail::sp_counted_base::release 1ms 0.0017% 81.63% 295ms 0.51% vtkDataArrayPrivate::DoComputeScalarRange 19ms 0.033% 81.67% 291ms 0.5% vtk::detail::smp::vtkSMPToolsImpl::For