File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 100261ms, 91.43% of 109654ms total Dropped 1124 nodes (cum <= 548.27ms) flat flat% sum% cum cum% 0 0% 0% 109641ms 100% __libc_start_call_main 0 0% 0% 109641ms 100% __libc_start_main_impl 0 0% 0% 109641ms 100% _start 0 0% 0% 109639ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 109639ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 109639ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 109639ms 100% main 0 0% 0% 109594ms 99.95% CxxTest::RealTestDescription::run 0 0% 0% 109594ms 99.95% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 109594ms 99.95% CxxTest::TestRunner::runTest (inline) 0 0% 0% 109594ms 99.95% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 109594ms 99.95% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 109593ms 99.94% AbstractConvergenceTester::Converge 4ms 0.0036% 0.0036% 108632ms 99.07% AbstractCardiacProblem::Solve 10ms 0.0091% 0.013% 107896ms 98.40% AbstractDynamicLinearPdeSolver::Solve 3ms 0.0027% 0.016% 58250ms 53.12% LinearSystem::Solve 3ms 0.0027% 0.018% 57754ms 52.67% KSPSolve 13ms 0.012% 0.03% 57751ms 52.67% KSPSolve_Private 9ms 0.0082% 0.038% 57392ms 52.34% KSPSolve_SYMMLQ 493ms 0.45% 0.49% 41866ms 38.18% AbstractCardiacTissue::SolveCellSystems 1302ms 1.19% 1.68% 32462ms 29.60% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 3ms 0.0027% 1.68% 31499ms 28.73% PCApply 5ms 0.0046% 1.68% 31490ms 28.72% PCApply_BJacobi_Singleblock 1ms 0.00091% 1.68% 29584ms 26.98% KSPSolve_PREONLY (partial-inline) 6ms 0.0055% 1.69% 28691ms 26.17% PCApply_ICC 5ms 0.0046% 1.69% 28685ms 26.16% MatSolve 28371ms 25.87% 27.57% 28680ms 26.15% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 5815ms 5.30% 32.87% 28585ms 26.07% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 1ms 0.00091% 32.87% 27091ms 24.71% KSP_PCApply.lto_priv.18 9ms 0.0082% 32.88% 20733ms 18.91% MatMult 264ms 0.24% 33.12% 20724ms 18.90% MatMult_SeqAIJ (partial-inline) 20286ms 18.50% 51.62% 20723ms 18.90% MatMult_SeqAIJ_Inode (inline) 1757ms 1.60% 53.22% 13436ms 12.25% CardiacNewtonSolver::Solve 1325ms 1.21% 54.43% 10296ms 9.39% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 8758ms 7.99% 62.42% 8758ms 7.99% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 4678ms 4.27% 66.68% 8162ms 7.44% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 450ms 0.41% 67.09% 8090ms 7.38% AbstractCardiacTissue::UpdateCaches (inline) 1007ms 0.92% 68.01% 6775ms 6.18% BidomainSolver::SetupLinearSystem 1360ms 1.24% 69.25% 6477ms 5.91% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 2ms 0.0018% 69.25% 5974ms 5.45% KSP_PCApply (partial-inline) 6ms 0.0055% 69.26% 5554ms 5.07% KSPConvergedDefault 3256ms 2.97% 72.23% 3329ms 3.04% __ieee754_log_fma 0 0% 72.23% 3147ms 2.87% boost::numeric::ublas::norm_inf (inline) 2207ms 2.01% 74.24% 3147ms 2.87% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.24% 3147ms 2.87% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.24% 3147ms 2.87% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 2804ms 2.56% 76.80% 2804ms 2.56% __memcpy_avx512_unaligned_erms 0 0% 76.80% 2785ms 2.54% PetscMemcpy (inline) 7ms 0.0064% 76.81% 2779ms 2.53% MatNullSpaceRemove 22ms 0.02% 76.83% 2504ms 2.28% VecCopy 1ms 0.00091% 76.83% 2480ms 2.26% VecCopy_Seq (partial-inline) 2477ms 2.26% 79.09% 2477ms 2.26% ddot_ 1591ms 1.45% 80.54% 2426ms 2.21% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 26ms 0.024% 80.56% 2426ms 2.21% std::pow (inline) 336ms 0.31% 80.87% 2391ms 2.18% __pow 18ms 0.016% 80.88% 2122ms 1.94% VecAXPY 4ms 0.0036% 80.89% 2104ms 1.92% VecAXPY_Seq 2090ms 1.91% 82.79% 2090ms 1.91% daxpy_ 5ms 0.0046% 82.80% 2043ms 1.86% VecDot 2ms 0.0018% 82.80% 2038ms 1.86% VecDot_Seq 1ms 0.00091% 82.80% 2036ms 1.86% VecXDot_Seq_Private.constprop.0 291ms 0.27% 83.06% 2016ms 1.84% __ieee754_pow_fma 4ms 0.0036% 83.07% 1776ms 1.62% VecMDot 6ms 0.0055% 83.07% 1772ms 1.62% VecMXDot_Private 1747ms 1.59% 84.67% 1757ms 1.60% VecMDot_Seq 1ms 0.00091% 84.67% 1589ms 1.45% AbstractFeVolumeIntegralAssembler::DoAssemble 1455ms 1.33% 86.00% 1455ms 1.33% [libchaste_heart.so] 16ms 0.015% 86.01% 1309ms 1.19% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1171ms 1.07% 87.08% 1209ms 1.10% exp_inline (inline) 0 0% 87.08% 1073ms 0.98% AbstractFeAssemblerInterface::AssembleMatrix (inline) 3ms 0.0027% 87.08% 996ms 0.91% VecMAXPY 989ms 0.9% 87.98% 993ms 0.91% VecMAXPY_Seq 0 0% 87.98% 936ms 0.85% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 87.98% 936ms 0.85% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 87.98% 936ms 0.85% boost_numeric_ublas_abs (inline) 936ms 0.85% 88.84% 936ms 0.85% std::abs (inline) 1ms 0.00091% 88.84% 836ms 0.76% KSP_RemoveNullSpace (inline) 2ms 0.0018% 88.84% 834ms 0.76% boost::numeric::ublas::matrix_assign (inline) 181ms 0.17% 89.00% 828ms 0.76% boost::numeric::ublas::indexing_matrix_assign 0 0% 89.00% 806ms 0.74% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 89.00% 806ms 0.74% CuboidMeshConstructor::Construct 1ms 0.00091% 89.00% 806ms 0.74% DistributedTetrahedralMesh::ConstructCuboid 504ms 0.46% 89.46% 783ms 0.71% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 2ms 0.0018% 89.47% 730ms 0.67% Element::Element 7ms 0.0064% 89.47% 723ms 0.66% VecScale 2ms 0.0018% 89.47% 716ms 0.65% VecScale_Seq 7ms 0.0064% 89.48% 713ms 0.65% AbstractTetrahedralElement::CalculateJacobian 711ms 0.65% 90.13% 711ms 0.65% dscal_ 7ms 0.0064% 90.14% 710ms 0.65% VecNorm 1ms 0.00091% 90.14% 688ms 0.63% VecNorm_Seq 0 0% 90.14% 685ms 0.62% AbstractBidomainSolver::FinaliseLinearSystem 209ms 0.19% 90.33% 683ms 0.62% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 90.33% 668ms 0.61% BidomainProblem::WriteOneStep 5ms 0.0046% 90.33% 659ms 0.6% AbstractTetrahedralElement::AbstractTetrahedralElement 2ms 0.0018% 90.33% 655ms 0.6% BidomainAssembler::ComputeMatrixTerm 2ms 0.0018% 90.34% 643ms 0.59% boost::numeric::ublas::c_matrix::c_matrix (inline) 632ms 0.58% 90.91% 632ms 0.58% __memset_avx512_unaligned_erms 0 0% 90.91% 623ms 0.57% PetscMemzero (inline) 4ms 0.0036% 90.92% 614ms 0.56% VecDuplicate 569ms 0.52% 91.43% 569ms 0.52% DistributedVector::Iterator::operator!=