File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 9946ms, 86.44% of 11506ms total Dropped 712 nodes (cum <= 57.53ms) flat flat% sum% cum cum% 0 0% 0% 11498ms 99.93% __libc_start_call_main 0 0% 0% 11498ms 99.93% __libc_start_main_impl 0 0% 0% 11498ms 99.93% _start 0 0% 0% 11495ms 99.90% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 11495ms 99.90% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 11495ms 99.90% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 11495ms 99.90% main 0 0% 0% 11455ms 99.56% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 11455ms 99.56% CxxTest::TestRunner::runTest (inline) 0 0% 0% 11455ms 99.56% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0087% 0.0087% 11437ms 99.40% AbstractCardiacProblem::Solve 1ms 0.0087% 0.017% 8830ms 76.74% AbstractDynamicLinearPdeSolver::Solve 49ms 0.43% 0.44% 7383ms 64.17% AbstractCardiacTissue::SolveCellSystems 82ms 0.71% 1.16% 4445ms 38.63% AbstractCardiacCell::ComputeExceptVoltage 96ms 0.83% 1.99% 3860ms 33.55% AbstractOneStepIvpOdeSolver::InternalSolve 130ms 1.13% 3.12% 3293ms 28.62% EulerIvpOdeSolver::CalculateNextYValue 730ms 6.34% 9.46% 3126ms 27.17% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1420ms 12.34% 21.81% 2817ms 24.48% __GI___exp 0 0% 21.81% 2562ms 22.27% MonodomainProblem::WriteOneStep 0 0% 21.81% 2472ms 21.48% Hdf5DataWriter::PutVector 4ms 0.035% 21.84% 2459ms 21.37% H5Dwrite 5ms 0.043% 21.88% 2434ms 21.15% H5D__write 89ms 0.77% 22.66% 2362ms 20.53% AbstractCardiacTissue::UpdateCaches (inline) 668ms 5.81% 28.46% 2209ms 19.20% CellLuoRudy1991FromCellML::GetIIonic 0 0% 28.46% 1364ms 11.85% H5D__chunk_collective_write 10ms 0.087% 28.55% 1364ms 11.85% H5F_set_coll_metadata_reads 1067ms 9.27% 37.82% 1335ms 11.60% __ieee754_exp_fma 15ms 0.13% 37.95% 1195ms 10.39% H5FD_s3comms_uriencode 6ms 0.052% 38.01% 990ms 8.60% H5D__chunk_cacheable 32ms 0.28% 38.28% 934ms 8.12% 0 0% 38.28% 924ms 8.03% LinearSystem::Solve 0 0% 38.28% 914ms 7.94% H5F_block_write 0 0% 38.28% 914ms 7.94% H5PB_write 1ms 0.0087% 38.29% 913ms 7.93% H5F__accum_write 0 0% 38.29% 912ms 7.93% H5FD_write 0 0% 38.29% 884ms 7.68% KSPSolve 2ms 0.017% 38.31% 884ms 7.68% KSPSolve_Private 2ms 0.017% 38.33% 880ms 7.65% KSPSolve_CG 266ms 2.31% 40.64% 877ms 7.62% H5S_select_iterate 2ms 0.017% 40.66% 846ms 7.35% std::pow (inline) 1ms 0.0087% 40.67% 843ms 7.33% H5D__mpio_select_write 82ms 0.71% 41.38% 843ms 7.33% __pow 0 0% 41.38% 781ms 6.79% PMPI_File_write_at_all 763ms 6.63% 48.01% 764ms 6.64% __GI_pwritev64 60ms 0.52% 48.53% 761ms 6.61% __ieee754_pow_fma 71ms 0.62% 49.15% 617ms 5.36% H5D__chunk_set_sizes 0 0% 49.15% 522ms 4.54% PCApply 1ms 0.0087% 49.16% 520ms 4.52% PCApply_BJacobi_Singleblock 239ms 2.08% 51.23% 509ms 4.42% MonodomainSolver::SetupLinearSystem 0 0% 51.23% 493ms 4.28% KSPSolve_PREONLY 2ms 0.017% 51.25% 491ms 4.27% PCApply_ICC 3ms 0.026% 51.28% 489ms 4.25% MatSolve 483ms 4.20% 55.48% 486ms 4.22% MatSolve_SeqSBAIJ_1_NaturalOrdering 201ms 1.75% 57.22% 378ms 3.29% CellLuoRudy1991FromCellML::VerifyStateVariables 377ms 3.28% 60.50% 377ms 3.28% log_inline (inline) 55ms 0.48% 60.98% 366ms 3.18% H5S_mpio_space_type 0 0% 60.98% 308ms 2.68% KSP_PCApply.lto_priv.7 4ms 0.035% 61.01% 297ms 2.58% MatMult 290ms 2.52% 63.53% 295ms 2.56% exp_inline (inline) 292ms 2.54% 66.07% 293ms 2.55% MatMult_SeqAIJ 0 0% 66.07% 266ms 2.31% KSPConvergedDefault 10ms 0.087% 66.16% 221ms 1.92% H5VM_chunk_index 168ms 1.46% 67.62% 217ms 1.89% top12 (inline) 0 0% 67.62% 214ms 1.86% KSP_PCApply 79ms 0.69% 68.30% 203ms 1.76% TimeStepper::TimeStepper 200ms 1.74% 70.04% 200ms 1.74% [libchaste_heart.so] 38ms 0.33% 70.37% 172ms 1.49% AbstractCardiacCell::SetVoltage (partial-inline) 42ms 0.37% 70.74% 164ms 1.43% __GI___libc_malloc 114ms 0.99% 71.73% 142ms 1.23% _int_malloc 134ms 1.16% 72.89% 134ms 1.16% asuint64 (inline) 7ms 0.061% 72.95% 132ms 1.15% ompi_datatype_create 91ms 0.79% 73.74% 129ms 1.12% AbstractOneStepIvpOdeSolver::Solve 129ms 1.12% 74.87% 129ms 1.12% TimeStepper::CalculateNextTime 5ms 0.043% 74.91% 119ms 1.03% MPI_Type_free 94ms 0.82% 75.73% 118ms 1.03% AbstractParameterisedSystem::SetAnyVariable 6ms 0.052% 75.78% 117ms 1.02% ompi_datatype_destroy 55ms 0.48% 76.26% 116ms 1.01% H5S_hyper_add_span_element 50ms 0.43% 76.69% 113ms 0.98% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 20ms 0.17% 76.86% 113ms 0.98% __GI___libc_free 111ms 0.96% 77.83% 111ms 0.96% H5VM_chunk_index_scaled 110ms 0.96% 78.78% 110ms 0.96% __memcpy_avx512_unaligned_erms 83ms 0.72% 79.51% 107ms 0.93% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 30ms 0.26% 79.77% 107ms 0.93% H5S_set_version 107ms 0.93% 80.70% 107ms 0.93% ddot_ 2ms 0.017% 80.71% 104ms 0.9% ompi_info_register_framework_params 31ms 0.27% 80.98% 103ms 0.9% ompi_datatype_release_args 100ms 0.87% 81.85% 100ms 0.87% H5VM_array_offset_pre 96ms 0.83% 82.69% 96ms 0.83% __ieee754_log_fma 80ms 0.7% 83.38% 95ms 0.83% AbstractParameterisedSystem::GetAnyVariable 28ms 0.24% 83.63% 93ms 0.81% _int_free 2ms 0.017% 83.64% 90ms 0.78% Hdf5DataWriter::PutUnlimitedVariable 0 0% 83.64% 87ms 0.76% std::vector::_M_assign_aux (inline) 0 0% 83.64% 87ms 0.76% std::vector::assign (inline) 0 0% 83.64% 79ms 0.69% PMPI_File_set_view 4ms 0.035% 83.68% 79ms 0.69% std::__copy_move::__copy_m (inline) 0 0% 83.68% 79ms 0.69% std::__copy_move_a (inline) 0 0% 83.68% 79ms 0.69% std::__copy_move_a1 (inline) 0 0% 83.68% 79ms 0.69% std::__copy_move_a2 (inline) 0 0% 83.68% 79ms 0.69% std::copy (inline) 26ms 0.23% 83.90% 78ms 0.68% AbstractCardiacCell::GetVoltage (partial-inline) 27ms 0.23% 84.14% 77ms 0.67% H5VM_array_calc 3ms 0.026% 84.16% 77ms 0.67% PMPI_Type_create_resized 1ms 0.0087% 84.17% 73ms 0.63% ompi_datatype_duplicate 28ms 0.24% 84.42% 63ms 0.55% H5S_select_iter_next 12ms 0.1% 84.52% 62ms 0.54% H5D__chunk_lookup 0 0% 84.52% 62ms 0.54% VecTDot 62ms 0.54% 85.06% 62ms 0.54% [libm.so.6] 61ms 0.53% 85.59% 61ms 0.53% std::vector::operator[] (inline) 1ms 0.0087% 85.60% 60ms 0.52% VecNorm 0 0% 85.60% 60ms 0.52% VecTDot_Seq 1ms 0.0087% 85.61% 60ms 0.52% VecXDot_Seq_Private.constprop.0 37ms 0.32% 85.93% 59ms 0.51% TimeStepper::AdvanceOneTimeStep 58ms 0.5% 86.43% 58ms 0.5% DistributedVector::Iterator::operator!= 0 0% 86.43% 58ms 0.5% MPI_Type_create_hindexed 1ms 0.0087% 86.44% 58ms 0.5% VecNorm_Seq