File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 356ms, 92.95% of 383ms total Dropped 155 nodes (cum <= 1.92ms) flat flat% sum% cum cum% 0 0% 0% 375ms 97.91% __libc_start_call_main 0 0% 0% 375ms 97.91% __libc_start_main_impl 0 0% 0% 375ms 97.91% _start 0 0% 0% 373ms 97.39% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 373ms 97.39% CxxTest::TestRunner::runAllTests 0 0% 0% 373ms 97.39% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 373ms 97.39% main 0 0% 0% 336ms 87.73% CxxTest::RealTestDescription::run 0 0% 0% 336ms 87.73% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 336ms 87.73% CxxTest::TestRunner::runTest (inline) 0 0% 0% 336ms 87.73% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 336ms 87.73% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 332ms 86.68% AbstractCardiacProblem::Solve 0 0% 0% 328ms 85.64% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 293ms 76.50% KSPSolve 0 0% 0% 293ms 76.50% KSPSolve_Private 0 0% 0% 293ms 76.50% LinearSystem::Solve 0 0% 0% 292ms 76.24% KSPSolve_CG 0 0% 0% 162ms 42.30% KSP_PCApply.lto_priv.7 0 0% 0% 153ms 39.95% PCApply 0 0% 0% 153ms 39.95% PCApply_BJacobi_Singleblock 0 0% 0% 130ms 33.94% KSPSolve_PREONLY (partial-inline) 0 0% 0% 123ms 32.11% MatSolve 121ms 31.59% 31.59% 123ms 32.11% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 31.59% 123ms 32.11% PCApply_ICC 0 0% 31.59% 54ms 14.10% MatMult 0 0% 31.59% 54ms 14.10% MatMult_SeqAIJ 53ms 13.84% 45.43% 54ms 14.10% MatMult_SeqAIJ_Inode (inline) 54ms 14.10% 59.53% 54ms 14.10% ddot_ 0 0% 59.53% 34ms 8.88% VecTDot 0 0% 59.53% 34ms 8.88% VecTDot_Seq 0 0% 59.53% 34ms 8.88% VecXDot_Seq_Private.constprop.0 0 0% 59.53% 33ms 8.62% CxxTest::RealWorldDescription::setUp 0 0% 59.53% 33ms 8.62% PMPI_Init_thread 0 0% 59.53% 33ms 8.62% PetscInitialize 0 0% 59.53% 33ms 8.62% PetscSetup::setUpWorld 0 0% 59.53% 33ms 8.62% PetscSetupUtils::CommonSetup 0 0% 59.53% 33ms 8.62% PetscSetupUtils::InitialisePetsc 0 0% 59.53% 33ms 8.62% ompi_mpi_init 0 0% 59.53% 32ms 8.36% AbstractCardiacTissue::SolveCellSystems 1ms 0.26% 59.79% 31ms 8.09% MatNullSpaceRemove 2ms 0.52% 60.31% 29ms 7.57% 0 0% 60.31% 22ms 5.74% AbstractCardiacCell::ComputeExceptVoltage 0 0% 60.31% 22ms 5.74% orte_init 0 0% 60.31% 21ms 5.48% AbstractOneStepIvpOdeSolver::InternalSolve 1ms 0.26% 60.57% 21ms 5.48% VecNorm 0 0% 60.57% 20ms 5.22% VecNorm_Seq 0 0% 60.57% 19ms 4.96% VecMDot 18ms 4.70% 65.27% 19ms 4.96% VecMDot_Seq 0 0% 65.27% 19ms 4.96% VecMXDot_Private 1ms 0.26% 65.54% 17ms 4.44% EulerIvpOdeSolver::CalculateNextYValue 4ms 1.04% 66.58% 16ms 4.18% CellLuoRudy1991FromCellML::EvaluateYDerivatives 8ms 2.09% 68.67% 14ms 3.66% __GI___exp 1ms 0.26% 68.93% 14ms 3.66% hwloc_linux_get_tid_last_cpu_location 0 0% 68.93% 14ms 3.66% hwloc_topology_load 0 0% 68.93% 14ms 3.66% mca_base_framework_open 0 0% 68.93% 13ms 3.39% mca_base_framework_components_register 0 0% 68.93% 13ms 3.39% mca_base_framework_register 0 0% 68.93% 13ms 3.39% opal_stackframe_output 0 0% 68.93% 12ms 3.13% __GI__dl_catch_exception 0 0% 68.93% 12ms 3.13% _dl_catch_error 0 0% 68.93% 12ms 3.13% _dlerror_run 0 0% 68.93% 12ms 3.13% mca_base_component_find 0 0% 68.93% 12ms 3.13% mca_base_component_repository_open 0 0% 68.93% 11ms 2.87% KSP_PCApply (partial-inline) 0 0% 68.93% 11ms 2.87% VecMAXPY 11ms 2.87% 71.80% 11ms 2.87% VecMAXPY_Seq 0 0% 71.80% 11ms 2.87% ___dlopen 0 0% 71.80% 11ms 2.87% _dl_open 0 0% 71.80% 11ms 2.87% dl_open_worker 0 0% 71.80% 11ms 2.87% dlopen_doit 0 0% 71.80% 11ms 2.87% dlopen_implementation (inline) 0 0% 71.80% 9ms 2.35% _dl_init 0 0% 71.80% 9ms 2.35% call_init (inline) 0 0% 71.80% 8ms 2.09% AbstractCardiacTissue::UpdateCaches (inline) 1ms 0.26% 72.06% 8ms 2.09% CellLuoRudy1991FromCellML::GetIIonic 0 0% 72.06% 8ms 2.09% VecAXPY 0 0% 72.06% 8ms 2.09% VecAXPY_Seq 0 0% 72.06% 8ms 2.09% VecAYPX 8ms 2.09% 74.15% 8ms 2.09% VecAYPX_Seq 8ms 2.09% 76.24% 8ms 2.09% daxpy_ 0 0% 76.24% 8ms 2.09% dl_open_worker_begin 6ms 1.57% 77.81% 6ms 1.57% __GI___libc_read 6ms 1.57% 79.37% 6ms 1.57% __ieee754_exp_fma 0 0% 79.37% 6ms 1.57% _dl_start_user 0 0% 79.37% 6ms 1.57% opal_hwloc_base_get_topology 0 0% 79.37% 6ms 1.57% orte_ess_base_proc_binding 0 0% 79.37% 5ms 1.31% KSPConvergedDefault 0 0% 79.37% 5ms 1.31% PetscMemcpy (inline) 5ms 1.31% 80.68% 5ms 1.31% __memcpy_avx512_unaligned_erms 1ms 0.26% 80.94% 5ms 1.31% __pow 0 0% 80.94% 5ms 1.31% _dl_map_object 0 0% 80.94% 5ms 1.31% _dl_map_object_from_fd 0 0% 80.94% 5ms 1.31% mca_base_framework_components_open 0 0% 80.94% 5ms 1.31% mca_topo_base_dist_graph_neighbors_count 0 0% 80.94% 5ms 1.31% std::pow (inline) 0 0% 80.94% 4ms 1.04% CxxTest::RealWorldDescription::tearDown 0 0% 80.94% 4ms 1.04% PetscFinalize 0 0% 80.94% 4ms 1.04% PetscMemzero (inline) 0 0% 80.94% 4ms 1.04% PetscSetup::tearDownWorld 0 0% 80.94% 4ms 1.04% PetscSetupUtils::CommonFinalize 0 0% 80.94% 4ms 1.04% ProgressReporter::Update 0 0% 80.94% 4ms 1.04% VecDuplicate 0 0% 80.94% 4ms 1.04% VecDuplicate_Seq 1ms 0.26% 81.20% 4ms 1.04% __GI___libc_malloc 0 0% 81.20% 4ms 1.04% __ieee754_pow_fma 4ms 1.04% 82.25% 4ms 1.04% __memset_avx512_unaligned_erms 0 0% 82.25% 4ms 1.04% _dl_lookup_symbol_x 0 0% 82.25% 4ms 1.04% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 82.25% 4ms 1.04% boost::serialization::singleton::get_instance 0 0% 82.25% 4ms 1.04% std::ostream::operator<< (inline) 0 0% 82.25% 3ms 0.78% AbstractCardiacProblem::Initialise 0 0% 82.25% 3ms 0.78% BidomainSolver::SetupLinearSystem 2ms 0.52% 82.77% 3ms 0.78% TimeStepper::TimeStepper 0 0% 82.77% 3ms 0.78% VecCopy 0 0% 82.77% 3ms 0.78% VecCopy_Seq (partial-inline) 0 0% 82.77% 3ms 0.78% VecSet 0 0% 82.77% 3ms 0.78% VecSet_Seq (partial-inline) 0 0% 82.77% 3ms 0.78% [hwloc_pci.so] 0 0% 82.77% 3ms 0.78% [libpciaccess.so.0.11.1] 3ms 0.78% 83.55% 3ms 0.78% __GI___clock_nanosleep 1ms 0.26% 83.81% 3ms 0.78% __GI___libc_free 0 0% 83.81% 3ms 0.78% __GI___nanosleep 3ms 0.78% 84.60% 3ms 0.78% __libc_openat64 3ms 0.78% 85.38% 3ms 0.78% __mmap64 3ms 0.78% 86.16% 3ms 0.78% __strcmp_evex 0 0% 86.16% 3ms 0.78% _dl_map_segments (inline) 0 0% 86.16% 3ms 0.78% _dl_open_relocate_one_object (inline) 0 0% 86.16% 3ms 0.78% _dl_relocate_object 1ms 0.26% 86.42% 3ms 0.78% _dl_runtime_resolve_xsavec 2ms 0.52% 86.95% 3ms 0.78% _int_malloc 0 0% 86.95% 3ms 0.78% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 86.95% 3ms 0.78% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 3ms 0.78% 87.73% 3ms 0.78% do_lookup_x 1ms 0.26% 87.99% 3ms 0.78% gzgets 2ms 0.52% 88.51% 3ms 0.78% malloc_consolidate 0 0% 88.51% 3ms 0.78% ompi_mpi_finalize 0 0% 88.51% 3ms 0.78% pci_get_strings 0 0% 88.51% 3ms 0.78% usleep 0 0% 88.51% 2ms 0.52% AbstractFeVolumeIntegralAssembler::DoAssemble 2ms 0.52% 89.03% 2ms 0.52% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 89.03% 2ms 0.52% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 89.03% 2ms 0.52% PetscFreeAlign 0 0% 89.03% 2ms 0.52% PetscMallocA 0 0% 89.03% 2ms 0.52% PetscMallocAlign (partial-inline) 2ms 0.52% 89.56% 2ms 0.52% VecCreate 0 0% 89.56% 2ms 0.52% VecCreate_Seq 0 0% 89.56% 2ms 0.52% VecDestroy 2ms 0.52% 90.08% 2ms 0.52% VecRestoreArrayRead 0 0% 90.08% 2ms 0.52% VecSetType 0 0% 90.08% 2ms 0.52% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 2ms 0.52% 90.60% 2ms 0.52% __GI___fstatat64 2ms 0.52% 91.12% 2ms 0.52% __GI___libc_write 0 0% 91.12% 2ms 0.52% __GI_exit 0 0% 91.12% 2ms 0.52% __cxa_finalize 0 0% 91.12% 2ms 0.52% __opendir 0 0% 91.12% 2ms 0.52% __run_exit_handlers 0 0% 91.12% 2ms 0.52% _dl_call_fini 0 0% 91.12% 2ms 0.52% _dl_fini 0 0% 91.12% 2ms 0.52% _dl_fixup 0 0% 91.12% 2ms 0.52% _int_free 0 0% 91.12% 2ms 0.52% _int_free_maybe_consolidate 0 0% 91.12% 2ms 0.52% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 91.12% 2ms 0.52% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 0 0% 91.12% 2ms 0.52% clone3 0 0% 91.12% 2ms 0.52% elf_dynamic_do_Rela (inline) 2ms 0.52% 91.64% 2ms 0.52% elf_get_dynamic_info (inline) 0 0% 91.64% 2ms 0.52% elf_machine_rela (inline) 0 0% 91.64% 2ms 0.52% event_base_loop 2ms 0.52% 92.17% 2ms 0.52% exp_inline (inline) 2ms 0.52% 92.69% 2ms 0.52% log_inline (inline) 0 0% 92.69% 2ms 0.52% resolve_map (inline) 0 0% 92.69% 2ms 0.52% start_thread 0 0% 92.69% 2ms 0.52% std::__basic_file::xsputn 0 0% 92.69% 2ms 0.52% std::basic_filebuf::_M_convert_to_external 0 0% 92.69% 2ms 0.52% std::basic_filebuf::overflow 0 0% 92.69% 2ms 0.52% std::basic_filebuf::sync 0 0% 92.69% 2ms 0.52% std::endl (inline) 0 0% 92.69% 2ms 0.52% std::flush (inline) 1ms 0.26% 92.95% 2ms 0.52% std::ostream::_M_insert 0 0% 92.95% 2ms 0.52% std::ostream::flush