File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 9888ms, 86.52% of 11429ms total Dropped 690 nodes (cum <= 57.15ms) flat flat% sum% cum cum% 0 0% 0% 11423ms 99.95% __libc_start_call_main 0 0% 0% 11423ms 99.95% __libc_start_main_impl 0 0% 0% 11423ms 99.95% _start 0 0% 0% 11421ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 11421ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 11421ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 11421ms 99.93% main 0 0% 0% 11384ms 99.61% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 11384ms 99.61% CxxTest::TestRunner::runTest (inline) 0 0% 0% 11384ms 99.61% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0087% 0.0087% 11367ms 99.46% AbstractCardiacProblem::Solve 2ms 0.017% 0.026% 8850ms 77.43% AbstractDynamicLinearPdeSolver::Solve 50ms 0.44% 0.46% 6992ms 61.18% AbstractCardiacTissue::SolveCellSystems 65ms 0.57% 1.03% 4254ms 37.22% AbstractCardiacCell::ComputeExceptVoltage 87ms 0.76% 1.79% 3724ms 32.58% AbstractOneStepIvpOdeSolver::InternalSolve 112ms 0.98% 2.77% 3152ms 27.58% EulerIvpOdeSolver::CalculateNextYValue 736ms 6.44% 9.21% 2996ms 26.21% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1360ms 11.90% 21.11% 2716ms 23.76% __GI___exp 1ms 0.0087% 21.12% 2473ms 21.64% MonodomainProblem::WriteOneStep 3ms 0.026% 21.15% 2397ms 20.97% Hdf5DataWriter::PutVector 1ms 0.0087% 21.16% 2372ms 20.75% H5Dwrite 2ms 0.017% 21.17% 2359ms 20.64% H5D__write 78ms 0.68% 21.86% 2190ms 19.16% AbstractCardiacTissue::UpdateCaches (inline) 606ms 5.30% 27.16% 2051ms 17.95% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.0087% 27.17% 1480ms 12.95% H5D__chunk_collective_write 7ms 0.061% 27.23% 1479ms 12.94% H5F_set_coll_metadata_reads 13ms 0.11% 27.34% 1314ms 11.50% H5FD_s3comms_uriencode 1050ms 9.19% 36.53% 1310ms 11.46% __ieee754_exp_fma 1ms 0.0087% 36.54% 1192ms 10.43% LinearSystem::Solve 0 0% 36.54% 1122ms 9.82% KSPSolve 4ms 0.035% 36.57% 1122ms 9.82% KSPSolve_Private 0 0% 36.57% 1116ms 9.76% KSPSolve_CG 28ms 0.24% 36.82% 1060ms 9.27% 1ms 0.0087% 36.83% 1048ms 9.17% H5F_block_write 1ms 0.0087% 36.84% 1047ms 9.16% H5PB_write 1ms 0.0087% 36.84% 1046ms 9.15% H5F__accum_write 3ms 0.026% 36.87% 1045ms 9.14% H5FD_write 0 0% 36.87% 984ms 8.61% H5D__mpio_select_write 0 0% 36.87% 929ms 8.13% PMPI_File_write_at_all 912ms 7.98% 44.85% 914ms 8.00% __GI_pwritev64 1ms 0.0087% 44.86% 815ms 7.13% H5D__chunk_cacheable 0 0% 44.86% 743ms 6.50% std::pow (inline) 76ms 0.66% 45.52% 742ms 6.49% __pow 217ms 1.90% 47.42% 704ms 6.16% H5S_select_iterate 64ms 0.56% 47.98% 665ms 5.82% __ieee754_pow_fma 350ms 3.06% 51.05% 649ms 5.68% MonodomainSolver::SetupLinearSystem 1ms 0.0087% 51.05% 644ms 5.63% PCApply 0 0% 51.05% 639ms 5.59% PCApply_BJacobi_Singleblock 0 0% 51.05% 611ms 5.35% KSPSolve_PREONLY 0 0% 51.05% 606ms 5.30% MatSolve 599ms 5.24% 56.30% 606ms 5.30% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 56.30% 606ms 5.30% PCApply_ICC 55ms 0.48% 56.78% 501ms 4.38% H5D__chunk_set_sizes 2ms 0.017% 56.79% 417ms 3.65% MatMult 414ms 3.62% 60.42% 415ms 3.63% MatMult_SeqAIJ 1ms 0.0087% 60.43% 375ms 3.28% KSP_PCApply.lto_priv.7 53ms 0.46% 60.89% 347ms 3.04% H5S_mpio_space_type 208ms 1.82% 62.71% 346ms 3.03% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 62.71% 346ms 3.03% KSPConvergedDefault 321ms 2.81% 65.52% 321ms 2.81% log_inline (inline) 1ms 0.0087% 65.53% 272ms 2.38% KSP_PCApply 230ms 2.01% 67.54% 241ms 2.11% exp_inline (inline) 187ms 1.64% 69.17% 233ms 2.04% top12 (inline) 84ms 0.73% 69.91% 220ms 1.92% TimeStepper::TimeStepper 190ms 1.66% 71.57% 190ms 1.66% [libchaste_heart.so] 29ms 0.25% 71.83% 180ms 1.57% AbstractCardiacCell::SetVoltage (partial-inline) 8ms 0.07% 71.90% 155ms 1.36% H5VM_chunk_index 6ms 0.052% 71.95% 144ms 1.26% ompi_datatype_destroy 30ms 0.26% 72.21% 142ms 1.24% __GI___libc_malloc 6ms 0.052% 72.26% 141ms 1.23% MPI_Type_free 15ms 0.13% 72.39% 134ms 1.17% __GI___libc_free 109ms 0.95% 73.35% 133ms 1.16% AbstractParameterisedSystem::SetAnyVariable 133ms 1.16% 74.51% 133ms 1.16% ddot_ 40ms 0.35% 74.86% 132ms 1.15% ompi_datatype_release_args 3ms 0.026% 74.89% 132ms 1.15% ompi_info_register_framework_params 131ms 1.15% 76.03% 131ms 1.15% TimeStepper::CalculateNextTime 123ms 1.08% 77.11% 123ms 1.08% asuint64 (inline) 88ms 0.77% 77.88% 121ms 1.06% AbstractOneStepIvpOdeSolver::Solve 6ms 0.052% 77.93% 121ms 1.06% ompi_datatype_create 36ms 0.31% 78.25% 120ms 1.05% H5S_set_version 97ms 0.85% 79.10% 120ms 1.05% _int_malloc 46ms 0.4% 79.50% 119ms 1.04% _int_free 115ms 1.01% 80.51% 115ms 1.01% __memcpy_avx512_unaligned_erms 44ms 0.38% 80.89% 103ms 0.9% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 0 0% 80.89% 98ms 0.86% std::vector::_M_assign_aux (inline) 0 0% 80.89% 98ms 0.86% std::vector::assign (inline) 73ms 0.64% 81.53% 94ms 0.82% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 10ms 0.087% 81.62% 91ms 0.8% std::__copy_move::__copy_m (inline) 0 0% 81.62% 91ms 0.8% std::__copy_move_a (inline) 0 0% 81.62% 91ms 0.8% std::__copy_move_a1 (inline) 0 0% 81.62% 91ms 0.8% std::__copy_move_a2 (inline) 0 0% 81.62% 91ms 0.8% std::copy (inline) 45ms 0.39% 82.01% 90ms 0.79% H5S_hyper_add_span_element 1ms 0.0087% 82.02% 89ms 0.78% VecNorm 87ms 0.76% 82.78% 87ms 0.76% H5VM_chunk_index_scaled 87ms 0.76% 83.54% 87ms 0.76% __ieee754_log_fma 38ms 0.33% 83.87% 84ms 0.73% H5VM_array_calc 0 0% 83.87% 83ms 0.73% VecNorm_Seq 55ms 0.48% 84.36% 80ms 0.7% AbstractParameterisedSystem::GetAnyVariable 2ms 0.017% 84.37% 75ms 0.66% Hdf5DataWriter::PutUnlimitedVariable 2ms 0.017% 84.39% 74ms 0.65% PMPI_File_set_view 0 0% 84.39% 72ms 0.63% VecTDot 0 0% 84.39% 71ms 0.62% VecTDot_Seq 0 0% 84.39% 71ms 0.62% VecXDot_Seq_Private.constprop.0 0 0% 84.39% 66ms 0.58% PMPI_Type_create_resized 0 0% 84.39% 65ms 0.57% VecDuplicate 2ms 0.017% 84.41% 65ms 0.57% VecDuplicate_MPI 64ms 0.56% 84.97% 64ms 0.56% TimeStepper::GetNextTimeStep 1ms 0.0087% 84.98% 63ms 0.55% ompi_datatype_duplicate 61ms 0.53% 85.51% 61ms 0.53% H5VM_array_offset_pre 21ms 0.18% 85.69% 61ms 0.53% ompi_datatype_set_args 38ms 0.33% 86.03% 59ms 0.52% TimeStepper::AdvanceOneTimeStep 22ms 0.19% 86.22% 58ms 0.51% AbstractCardiacCell::GetVoltage (partial-inline) 34ms 0.3% 86.52% 58ms 0.51% std::__cxx11::basic_string::basic_string