File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 113346ms, 92.02% of 123180ms total Dropped 1130 nodes (cum <= 615.90ms) flat flat% sum% cum cum% 0 0% 0% 123168ms 100% __libc_start_call_main 0 0% 0% 123168ms 100% __libc_start_main_impl 0 0% 0% 123168ms 100% _start 0 0% 0% 123165ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 123165ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 123165ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 123165ms 100% main 0 0% 0% 123127ms 100% AbstractConvergenceTester::Converge 0 0% 0% 123127ms 100% CxxTest::RealTestDescription::run 0 0% 0% 123127ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 123127ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 123127ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 123127ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 1ms 0.00081% 0.00081% 121877ms 98.94% AbstractCardiacProblem::Solve 11ms 0.0089% 0.0097% 121114ms 98.32% AbstractDynamicLinearPdeSolver::Solve 2ms 0.0016% 0.011% 65753ms 53.38% LinearSystem::Solve 0 0% 0.011% 65260ms 52.98% KSPSolve 18ms 0.015% 0.026% 65260ms 52.98% KSPSolve_Private 17ms 0.014% 0.04% 64866ms 52.66% KSPSolve_SYMMLQ 288ms 0.23% 0.27% 46489ms 37.74% AbstractCardiacTissue::SolveCellSystems 1ms 0.00081% 0.27% 37260ms 30.25% PCApply 4ms 0.0032% 0.28% 37252ms 30.24% PCApply_BJacobi_Singleblock 1446ms 1.17% 1.45% 36458ms 29.60% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 1ms 0.00081% 1.45% 34769ms 28.23% KSPSolve_PREONLY (partial-inline) 2ms 0.0016% 1.45% 33624ms 27.30% PCApply_ICC 7ms 0.0057% 1.46% 33622ms 27.30% MatSolve 33145ms 26.91% 28.37% 33615ms 27.29% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 3ms 0.0024% 28.37% 32152ms 26.10% KSP_PCApply.lto_priv.18 6918ms 5.62% 33.99% 31727ms 25.76% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 2ms 0.0016% 33.99% 21954ms 17.82% MatMult 321ms 0.26% 34.25% 21952ms 17.82% MatMult_SeqAIJ (partial-inline) 21395ms 17.37% 51.62% 21952ms 17.82% MatMult_SeqAIJ_Inode (inline) 2024ms 1.64% 53.26% 18095ms 14.69% CardiacNewtonSolver::Solve 6773ms 5.50% 58.76% 11616ms 9.43% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 365ms 0.3% 59.06% 9064ms 7.36% AbstractCardiacTissue::UpdateCaches (inline) 2007ms 1.63% 60.68% 8499ms 6.90% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1123ms 0.91% 61.60% 7778ms 6.31% BidomainSolver::SetupLinearSystem 1101ms 0.89% 62.49% 7238ms 5.88% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 2ms 0.0016% 62.49% 7161ms 5.81% KSP_PCApply (partial-inline) 3ms 0.0024% 62.49% 6533ms 5.30% KSPConvergedDefault 5857ms 4.75% 67.25% 5857ms 4.75% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 4548ms 3.69% 70.94% 4581ms 3.72% __ieee754_log_fma 0 0% 70.94% 4021ms 3.26% boost::numeric::ublas::norm_inf (inline) 2783ms 2.26% 73.20% 4021ms 3.26% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 73.20% 4021ms 3.26% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 73.20% 4021ms 3.26% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 4ms 0.0032% 73.20% 3389ms 2.75% MatNullSpaceRemove 20ms 0.016% 73.22% 3207ms 2.60% std::pow (inline) 390ms 0.32% 73.54% 3181ms 2.58% __pow 1892ms 1.54% 75.07% 3095ms 2.51% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 3089ms 2.51% 77.58% 3089ms 2.51% __memcpy_avx_unaligned_erms 0 0% 77.58% 3053ms 2.48% PetscMemcpy (inline) 320ms 0.26% 77.84% 2774ms 2.25% __ieee754_pow_fma 20ms 0.016% 77.86% 2616ms 2.12% VecCopy 1ms 0.00081% 77.86% 2591ms 2.10% VecCopy_Seq (partial-inline) 2557ms 2.08% 79.93% 2557ms 2.08% ddot_ 11ms 0.0089% 79.94% 2483ms 2.02% VecAXPY 9ms 0.0073% 79.95% 2472ms 2.01% VecAXPY_Seq 2447ms 1.99% 81.94% 2447ms 1.99% daxpy_ 3ms 0.0024% 81.94% 2059ms 1.67% VecDot 0 0% 81.94% 2056ms 1.67% VecDot_Seq 1ms 0.00081% 81.94% 2056ms 1.67% VecXDot_Seq_Private.constprop.0 2ms 0.0016% 81.94% 2041ms 1.66% AbstractFeVolumeIntegralAssembler::DoAssemble 3ms 0.0024% 81.94% 1888ms 1.53% VecMDot 8ms 0.0065% 81.95% 1885ms 1.53% VecMXDot_Private 1873ms 1.52% 83.47% 1877ms 1.52% VecMDot_Seq 34ms 0.028% 83.50% 1708ms 1.39% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1602ms 1.30% 84.80% 1668ms 1.35% exp_inline (inline) 7ms 0.0057% 84.80% 1497ms 1.22% VecMAXPY 1484ms 1.20% 86.01% 1490ms 1.21% VecMAXPY_Seq 1475ms 1.20% 87.21% 1475ms 1.20% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 0 0% 87.21% 1401ms 1.14% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 87.21% 1134ms 0.92% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 87.21% 1134ms 0.92% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 87.21% 1134ms 0.92% boost_numeric_ublas_abs (inline) 1134ms 0.92% 88.13% 1134ms 0.92% std::abs (inline) 3ms 0.0024% 88.13% 1108ms 0.9% KSP_RemoveNullSpace (inline) 0 0% 88.13% 1099ms 0.89% CuboidMeshConstructor::Construct 0 0% 88.13% 1098ms 0.89% AbstractTetrahedralMesh::ConstructRegularSlabMesh 1ms 0.00081% 88.13% 1098ms 0.89% DistributedTetrahedralMesh::ConstructCuboid 7ms 0.0057% 88.14% 1096ms 0.89% boost::numeric::ublas::matrix_assign (inline) 206ms 0.17% 88.30% 1082ms 0.88% boost::numeric::ublas::indexing_matrix_assign 823ms 0.67% 88.97% 1065ms 0.86% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 1049ms 0.85% 89.82% 1049ms 0.85% __memset_avx2_unaligned_erms 0 0% 89.82% 1021ms 0.83% PetscMemzero (inline) 1ms 0.00081% 89.82% 1002ms 0.81% Element::Element 2ms 0.0016% 89.82% 974ms 0.79% AbstractTetrahedralElement::CalculateJacobian 0 0% 89.82% 927ms 0.75% AbstractTetrahedralElement::AbstractTetrahedralElement 6ms 0.0049% 89.83% 855ms 0.69% VecScale 4ms 0.0032% 89.83% 853ms 0.69% BidomainAssembler::ComputeMatrixTerm 2ms 0.0016% 89.83% 849ms 0.69% VecScale_Seq 0 0% 89.83% 847ms 0.69% VecDuplicate 11ms 0.0089% 89.84% 844ms 0.69% boost::numeric::ublas::c_matrix::c_matrix (inline) 844ms 0.69% 90.53% 844ms 0.69% dscal_ 832ms 0.68% 91.20% 832ms 0.68% [libchaste_heart.so] 1ms 0.00081% 91.20% 784ms 0.64% AbstractBidomainSolver::FinaliseLinearSystem 238ms 0.19% 91.40% 781ms 0.63% AbstractBidomainSolver::CheckCompatibilityCondition 1ms 0.00081% 91.40% 755ms 0.61% VecNorm 0 0% 91.40% 746ms 0.61% VecNorm_Seq 742ms 0.6% 92.00% 742ms 0.6% log_inline (inline) 7ms 0.0057% 92.01% 708ms 0.57% PetscMallocA 2ms 0.0016% 92.01% 703ms 0.57% BidomainProblem::WriteOneStep 10ms 0.0081% 92.02% 701ms 0.57% PetscMallocAlign (partial-inline) 0 0% 92.02% 640ms 0.52% AbstractFeAssemblerInterface::Assemble (inline)