File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12818ms, 86.39% of 14837ms total Dropped 733 nodes (cum <= 74.19ms) flat flat% sum% cum cum% 0 0% 0% 14829ms 99.95% __libc_start_call_main 0 0% 0% 14829ms 99.95% __libc_start_main_impl 0 0% 0% 14829ms 99.95% _start 0 0% 0% 14826ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14826ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14826ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14826ms 99.93% main 0 0% 0% 14789ms 99.68% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14789ms 99.68% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14789ms 99.68% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 5ms 0.034% 0.034% 14768ms 99.53% AbstractCardiacProblem::Solve 6ms 0.04% 0.074% 11439ms 77.10% AbstractDynamicLinearPdeSolver::Solve 35ms 0.24% 0.31% 9197ms 61.99% AbstractCardiacTissue::SolveCellSystems 129ms 0.87% 1.18% 5695ms 38.38% AbstractCardiacCell::ComputeExceptVoltage 134ms 0.9% 2.08% 4909ms 33.09% AbstractOneStepIvpOdeSolver::InternalSolve 175ms 1.18% 3.26% 4164ms 28.06% EulerIvpOdeSolver::CalculateNextYValue 878ms 5.92% 9.18% 3953ms 26.64% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1722ms 11.61% 20.79% 3673ms 24.76% __GI___exp 2ms 0.013% 20.80% 3248ms 21.89% MonodomainProblem::WriteOneStep 1ms 0.0067% 20.81% 3087ms 20.81% H5Dwrite 3ms 0.02% 20.83% 3086ms 20.80% Hdf5DataWriter::PutVector 6ms 0.04% 20.87% 3060ms 20.62% H5D__write 88ms 0.59% 21.46% 2668ms 17.98% AbstractCardiacTissue::UpdateCaches (inline) 771ms 5.20% 26.66% 2528ms 17.04% CellLuoRudy1991FromCellML::GetIIonic 1718ms 11.58% 38.24% 1863ms 12.56% __ieee754_exp_fma 0 0% 38.24% 1805ms 12.17% H5D__chunk_collective_write 13ms 0.088% 38.32% 1805ms 12.17% H5F_set_coll_metadata_reads 17ms 0.11% 38.44% 1595ms 10.75% H5FD_s3comms_uriencode 1ms 0.0067% 38.44% 1486ms 10.02% LinearSystem::Solve 0 0% 38.44% 1332ms 8.98% KSPSolve 2ms 0.013% 38.46% 1332ms 8.98% KSPSolve_Private 3ms 0.02% 38.48% 1317ms 8.88% KSPSolve_CG 51ms 0.34% 38.82% 1242ms 8.37% 1ms 0.0067% 38.83% 1242ms 8.37% H5F_block_write 1ms 0.0067% 38.84% 1241ms 8.36% H5PB_write 3ms 0.02% 38.86% 1240ms 8.36% H5FD_write 0 0% 38.86% 1240ms 8.36% H5F__accum_write 1ms 0.0067% 38.86% 1156ms 7.79% H5D__mpio_select_write 8ms 0.054% 38.92% 1144ms 7.71% H5D__chunk_cacheable 1ms 0.0067% 38.92% 1039ms 7.00% PMPI_File_write_at_all 1007ms 6.79% 45.71% 1011ms 6.81% __GI_pwritev64 352ms 2.37% 48.08% 994ms 6.70% H5S_select_iterate 9ms 0.061% 48.14% 913ms 6.15% std::pow (inline) 92ms 0.62% 48.76% 904ms 6.09% __pow 86ms 0.58% 49.34% 812ms 5.47% __ieee754_pow_fma 303ms 2.04% 51.39% 730ms 4.92% MonodomainSolver::SetupLinearSystem 1ms 0.0067% 51.39% 701ms 4.72% PCApply 0 0% 51.39% 696ms 4.69% PCApply_BJacobi_Singleblock 353ms 2.38% 53.77% 669ms 4.51% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 53.77% 668ms 4.50% KSPSolve_PREONLY 2ms 0.013% 53.78% 664ms 4.48% MatSolve 0 0% 53.78% 664ms 4.48% PCApply_ICC 653ms 4.40% 58.19% 662ms 4.46% MatSolve_SeqSBAIJ_1_NaturalOrdering 58ms 0.39% 58.58% 645ms 4.35% H5D__chunk_set_sizes 2ms 0.013% 58.59% 580ms 3.91% MatMult 577ms 3.89% 62.48% 578ms 3.90% MatMult_SeqAIJ 1ms 0.0067% 62.49% 533ms 3.59% KSP_PCApply.lto_priv.7 53ms 0.36% 62.84% 439ms 2.96% H5S_mpio_space_type 385ms 2.59% 65.44% 385ms 2.59% log_inline (inline) 153ms 1.03% 66.47% 301ms 2.03% TimeStepper::TimeStepper 286ms 1.93% 68.40% 298ms 2.01% exp_inline (inline) 15ms 0.1% 68.50% 230ms 1.55% H5VM_chunk_index 2ms 0.013% 68.51% 218ms 1.47% KSPConvergedDefault 50ms 0.34% 68.85% 218ms 1.47% __GI___libc_malloc 162ms 1.09% 69.94% 200ms 1.35% _int_malloc 124ms 0.84% 70.78% 196ms 1.32% top12 (inline) 151ms 1.02% 71.79% 193ms 1.30% AbstractOneStepIvpOdeSolver::Solve 179ms 1.21% 73.00% 179ms 1.21% [libchaste_heart.so] 150ms 1.01% 74.01% 170ms 1.15% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 0 0% 74.01% 169ms 1.14% KSP_PCApply 86ms 0.58% 74.59% 159ms 1.07% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 3ms 0.02% 74.61% 159ms 1.07% Hdf5DataWriter::PutUnlimitedVariable 159ms 1.07% 75.68% 159ms 1.07% std::isinf (inline) 158ms 1.06% 76.75% 158ms 1.06% TimeStepper::CalculateNextTime 5ms 0.034% 76.78% 157ms 1.06% MPI_Type_free 8ms 0.054% 76.83% 155ms 1.04% ompi_datatype_destroy 36ms 0.24% 77.08% 154ms 1.04% __GI___libc_free 151ms 1.02% 78.10% 151ms 1.02% ddot_ 4ms 0.027% 78.12% 150ms 1.01% ompi_datatype_create 30ms 0.2% 78.32% 145ms 0.98% AbstractCardiacCell::SetVoltage (partial-inline) 7ms 0.047% 78.37% 137ms 0.92% ompi_info_register_framework_params 33ms 0.22% 78.59% 136ms 0.92% ompi_datatype_release_args 2ms 0.013% 78.61% 125ms 0.84% PMPI_File_set_view 17ms 0.11% 78.72% 123ms 0.83% H5S_set_version 121ms 0.82% 79.54% 121ms 0.82% H5VM_chunk_index_scaled 54ms 0.36% 79.90% 118ms 0.8% _int_free 2ms 0.013% 79.92% 117ms 0.79% VecNorm 116ms 0.78% 80.70% 116ms 0.78% __ieee754_log_fma 110ms 0.74% 81.44% 110ms 0.74% __memcpy_avx_unaligned_erms 0 0% 81.44% 109ms 0.73% VecDuplicate 3ms 0.02% 81.46% 109ms 0.73% VecDuplicate_MPI 1ms 0.0067% 81.47% 107ms 0.72% VecNorm_Seq 47ms 0.32% 81.78% 106ms 0.71% H5VM_array_calc 49ms 0.33% 82.11% 101ms 0.68% H5S_hyper_add_span_element 70ms 0.47% 82.58% 100ms 0.67% AbstractParameterisedSystem::GetAnyVariable 37ms 0.25% 82.83% 100ms 0.67% std::__cxx11::basic_string::basic_string 4ms 0.027% 82.86% 99ms 0.67% PMPI_Type_create_resized 86ms 0.58% 83.44% 98ms 0.66% AbstractParameterisedSystem::SetAnyVariable 94ms 0.63% 84.07% 94ms 0.63% H5VM_array_offset_pre 0 0% 84.07% 92ms 0.62% VecTDot 0 0% 84.07% 91ms 0.61% VecTDot_Seq 1ms 0.0067% 84.08% 91ms 0.61% VecXDot_Seq_Private.constprop.0 32ms 0.22% 84.30% 89ms 0.6% __libc_calloc 2ms 0.013% 84.31% 89ms 0.6% ompi_datatype_duplicate 22ms 0.15% 84.46% 89ms 0.6% ompi_datatype_set_args 88ms 0.59% 85.05% 88ms 0.59% [libm.so.6] 30ms 0.2% 85.25% 84ms 0.57% AbstractCardiacCell::GetVoltage (partial-inline) 5ms 0.034% 85.29% 80ms 0.54% MPI_Type_create_hindexed 2ms 0.013% 85.30% 80ms 0.54% opal_datatype_create_desc 48ms 0.32% 85.62% 79ms 0.53% TimeStepper::AdvanceOneTimeStep 32ms 0.22% 85.84% 76ms 0.51% H5S_select_iter_next 76ms 0.51% 86.35% 76ms 0.51% asuint64 (inline) 6ms 0.04% 86.39% 75ms 0.51% MPI_Type_contiguous