File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 272ms, 89.18% of 305ms total Dropped 150 nodes (cum <= 1.52ms) flat flat% sum% cum cum% 0 0% 0% 299ms 98.03% __libc_start_call_main 0 0% 0% 299ms 98.03% __libc_start_main_impl 0 0% 0% 299ms 98.03% _start 0 0% 0% 297ms 97.38% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 297ms 97.38% CxxTest::TestRunner::runAllTests 0 0% 0% 297ms 97.38% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 297ms 97.38% main 0 0% 0% 261ms 85.57% CxxTest::RealTestDescription::run 0 0% 0% 261ms 85.57% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 261ms 85.57% CxxTest::TestRunner::runTest (inline) 0 0% 0% 261ms 85.57% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 261ms 85.57% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 257ms 84.26% AbstractCardiacProblem::Solve 0 0% 0% 256ms 83.93% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 234ms 76.72% KSPSolve 0 0% 0% 234ms 76.72% KSPSolve_CG 0 0% 0% 234ms 76.72% KSPSolve_Private 0 0% 0% 234ms 76.72% LinearSystem::Solve 0 0% 0% 152ms 49.84% KSP_PCApply.lto_priv.7 0 0% 0% 148ms 48.52% PCApply 0 0% 0% 148ms 48.52% PCApply_BJacobi_Singleblock 0 0% 0% 135ms 44.26% KSPSolve_PREONLY (partial-inline) 0 0% 0% 125ms 40.98% MatSolve 124ms 40.66% 40.66% 125ms 40.98% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 40.66% 125ms 40.98% PCApply_ICC 0 0% 40.66% 47ms 15.41% MatMult 0 0% 40.66% 47ms 15.41% MatMult_SeqAIJ 47ms 15.41% 56.07% 47ms 15.41% MatMult_SeqAIJ_Inode (inline) 0 0% 56.07% 33ms 10.82% CxxTest::RealWorldDescription::setUp 0 0% 56.07% 33ms 10.82% PMPI_Init_thread 0 0% 56.07% 33ms 10.82% PetscInitialize 0 0% 56.07% 33ms 10.82% PetscSetup::setUpWorld 0 0% 56.07% 33ms 10.82% PetscSetupUtils::CommonSetup 0 0% 56.07% 33ms 10.82% PetscSetupUtils::InitialisePetsc 0 0% 56.07% 33ms 10.82% ompi_mpi_init 1ms 0.33% 56.39% 28ms 9.18% 28ms 9.18% 65.57% 28ms 9.18% ddot_ 0 0% 65.57% 22ms 7.21% orte_init 1ms 0.33% 65.90% 20ms 6.56% MatNullSpaceRemove 0 0% 65.90% 19ms 6.23% AbstractCardiacTissue::SolveCellSystems 0 0% 65.90% 18ms 5.90% VecTDot 0 0% 65.90% 18ms 5.90% VecTDot_Seq 0 0% 65.90% 18ms 5.90% VecXDot_Seq_Private.constprop.0 0 0% 65.90% 15ms 4.92% __GI__dl_catch_exception 0 0% 65.90% 15ms 4.92% _dl_catch_error 0 0% 65.90% 15ms 4.92% _dlerror_run 0 0% 65.90% 15ms 4.92% hwloc_topology_load 0 0% 65.90% 14ms 4.59% hwloc_linux_get_tid_last_cpu_location 0 0% 65.90% 14ms 4.59% opal_stackframe_output 0 0% 65.90% 12ms 3.93% VecMDot 12ms 3.93% 69.84% 12ms 3.93% VecMDot_Seq 0 0% 69.84% 12ms 3.93% VecMXDot_Private 0 0% 69.84% 12ms 3.93% ___dlopen 0 0% 69.84% 12ms 3.93% _dl_open 0 0% 69.84% 12ms 3.93% dlopen_doit 0 0% 69.84% 12ms 3.93% dlopen_implementation (inline) 0 0% 69.84% 11ms 3.61% KSP_PCApply (partial-inline) 0 0% 69.84% 11ms 3.61% dl_open_worker 0 0% 69.84% 11ms 3.61% mca_base_component_find 0 0% 69.84% 11ms 3.61% mca_base_component_repository_open 0 0% 69.84% 11ms 3.61% mca_base_framework_components_register 0 0% 69.84% 11ms 3.61% mca_base_framework_open 0 0% 69.84% 11ms 3.61% mca_base_framework_register 0 0% 69.84% 10ms 3.28% AbstractCardiacCell::ComputeExceptVoltage 0 0% 69.84% 10ms 3.28% VecNorm 0 0% 69.84% 10ms 3.28% VecNorm_Seq 1ms 0.33% 70.16% 9ms 2.95% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 70.16% 9ms 2.95% _dl_init 0 0% 70.16% 9ms 2.95% call_init (inline) 8ms 2.62% 72.79% 8ms 2.62% __GI___libc_read 0 0% 72.79% 8ms 2.62% dl_open_worker_begin 0 0% 72.79% 8ms 2.62% orte_ess_base_proc_binding 0 0% 72.79% 7ms 2.30% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 72.79% 7ms 2.30% VecMAXPY 6ms 1.97% 74.75% 7ms 2.30% VecMAXPY_Seq 2ms 0.66% 75.41% 7ms 2.30% __GI___exp 0 0% 75.41% 7ms 2.30% opal_hwloc_base_get_topology 0 0% 75.41% 6ms 1.97% CellLuoRudy1991FromCellML::GetIIonic 2ms 0.66% 76.07% 6ms 1.97% __GI___libc_malloc 0 0% 76.07% 6ms 1.97% _dl_start_user 0 0% 76.07% 5ms 1.64% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 76.07% 5ms 1.64% EulerIvpOdeSolver::CalculateNextYValue 1ms 0.33% 76.39% 5ms 1.64% VecCreate 0 0% 76.39% 5ms 1.64% VecDuplicate 0 0% 76.39% 5ms 1.64% VecDuplicate_Seq 0 0% 76.39% 5ms 1.64% _dl_lookup_symbol_x 0 0% 76.39% 5ms 1.64% _dl_map_object 1ms 0.33% 76.72% 5ms 1.64% _int_malloc 2ms 0.66% 77.38% 5ms 1.64% boost::serialization::singleton::get_instance (partial-inline) 5ms 1.64% 79.02% 5ms 1.64% do_lookup_x 0 0% 79.02% 5ms 1.64% mca_base_framework_components_open 0 0% 79.02% 5ms 1.64% mca_topo_base_dist_graph_neighbors_count 0 0% 79.02% 4ms 1.31% PetscMallocA 0 0% 79.02% 4ms 1.31% PetscMallocAlign 0 0% 79.02% 4ms 1.31% VecAXPY 0 0% 79.02% 4ms 1.31% VecAXPY_Seq 3ms 0.98% 80.00% 4ms 1.31% __ieee754_exp_fma 0 0% 80.00% 4ms 1.31% __posix_memalign 2ms 0.66% 80.66% 4ms 1.31% __pow 0 0% 80.66% 4ms 1.31% _dl_map_object_from_fd 4ms 1.31% 81.97% 4ms 1.31% daxpy_ 3ms 0.98% 82.95% 4ms 1.31% malloc_consolidate 0 0% 82.95% 4ms 1.31% std::pow (inline) 0 0% 82.95% 3ms 0.98% BidomainSolver::SetupLinearSystem 0 0% 82.95% 3ms 0.98% CxxTest::RealWorldDescription::tearDown 0 0% 82.95% 3ms 0.98% PetscFinalize 0 0% 82.95% 3ms 0.98% PetscSetup::tearDownWorld 0 0% 82.95% 3ms 0.98% PetscSetupUtils::CommonFinalize 3ms 0.98% 83.93% 3ms 0.98% __GI___clock_nanosleep 0 0% 83.93% 3ms 0.98% __GI___nanosleep 1ms 0.33% 84.26% 3ms 0.98% __cxa_finalize 0 0% 84.26% 3ms 0.98% __dlclose 3ms 0.98% 85.25% 3ms 0.98% __memcpy_avx512_unaligned_erms 0 0% 85.25% 3ms 0.98% _dl_call_fini 0 0% 85.25% 3ms 0.98% _dl_close 0 0% 85.25% 3ms 0.98% _dl_close_worker (inline) 0 0% 85.25% 3ms 0.98% _dl_open_relocate_one_object (inline) 0 0% 85.25% 3ms 0.98% _dl_relocate_object 0 0% 85.25% 3ms 0.98% elf_dynamic_do_Rela (inline) 0 0% 85.25% 3ms 0.98% elf_machine_rela (inline) 0 0% 85.25% 3ms 0.98% mca_base_component_repository_release 0 0% 85.25% 3ms 0.98% ompi_mpi_finalize 0 0% 85.25% 3ms 0.98% resolve_map (inline) 0 0% 85.25% 3ms 0.98% usleep 0 0% 85.25% 2ms 0.66% AbstractCardiacProblem::Initialise 0 0% 85.25% 2ms 0.66% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 85.25% 2ms 0.66% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 85.25% 2ms 0.66% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 85.25% 2ms 0.66% KSPConvergedDefault 0 0% 85.25% 2ms 0.66% PetscMemcpy (inline) 0 0% 85.25% 2ms 0.66% XOpenDisplay 0 0% 85.25% 2ms 0.66% [hwloc_gl.so] 0 0% 85.25% 2ms 0.66% [hwloc_pci.so] 0 0% 85.25% 2ms 0.66% [libpciaccess.so.0.11.1] 0 0% 85.25% 2ms 0.66% [libxcb.so.1.1.0] 0 0% 85.25% 2ms 0.66% _XConnectXCB 0 0% 85.25% 2ms 0.66% __GI___pthread_mutex_unlock_usercnt (inline) 0 0% 85.25% 2ms 0.66% __GI_exit 0 0% 85.25% 2ms 0.66% __GI_getaddrinfo 2ms 0.66% 85.90% 2ms 0.66% __GI_munmap 0 0% 85.90% 2ms 0.66% ___pthread_mutex_unlock 0 0% 85.90% 2ms 0.66% __check_pf 1ms 0.33% 86.23% 2ms 0.66% __ieee754_pow_fma 0 0% 86.23% 2ms 0.66% __run_exit_handlers 0 0% 86.23% 2ms 0.66% __static_initialization_and_destruction_0 (inline) 0 0% 86.23% 2ms 0.66% _dl_fini 0 0% 86.23% 2ms 0.66% _dl_fixup 0 0% 86.23% 2ms 0.66% _dl_runtime_resolve_xsavec 0 0% 86.23% 2ms 0.66% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 1ms 0.33% 86.56% 2ms 0.66% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 86.56% 2ms 0.66% boost::serialization::singleton::get_mutable_instance (inline) 2ms 0.66% 87.21% 2ms 0.66% elf_get_dynamic_info (inline) 1ms 0.33% 87.54% 2ms 0.66% gzgets 1ms 0.33% 87.87% 2ms 0.66% hwloc_topology_set_userdata_import_callback 2ms 0.66% 88.52% 2ms 0.66% lll_mutex_unlock_optimized (inline) 0 0% 88.52% 2ms 0.66% mca_base_components_close 0 0% 88.52% 2ms 0.66% pci_get_strings 2ms 0.66% 89.18% 2ms 0.66% std::__cxx11::basic_string::basic_string 0 0% 89.18% 2ms 0.66% xcb_connect_to_display_with_auth_info