File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 7425ms, 88.19% of 8419ms total Dropped 645 nodes (cum <= 42.09ms) flat flat% sum% cum cum% 0 0% 0% 8412ms 99.92% __libc_start_call_main 0 0% 0% 8412ms 99.92% __libc_start_main_impl 0 0% 0% 8412ms 99.92% _start 0 0% 0% 8410ms 99.89% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 8410ms 99.89% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 8410ms 99.89% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 8410ms 99.89% main 0 0% 0% 8372ms 99.44% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 8372ms 99.44% CxxTest::TestRunner::runTest (inline) 0 0% 0% 8372ms 99.44% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.012% 0.012% 8358ms 99.28% AbstractCardiacProblem::Solve 1ms 0.012% 0.024% 6516ms 77.40% AbstractDynamicLinearPdeSolver::Solve 38ms 0.45% 0.48% 4952ms 58.82% AbstractCardiacTissue::SolveCellSystems 43ms 0.51% 0.99% 3025ms 35.93% AbstractCardiacCell::ComputeExceptVoltage 68ms 0.81% 1.79% 2659ms 31.58% AbstractOneStepIvpOdeSolver::InternalSolve 97ms 1.15% 2.95% 2304ms 27.37% EulerIvpOdeSolver::CalculateNextYValue 495ms 5.88% 8.83% 2173ms 25.81% CellLuoRudy1991FromCellML::EvaluateYDerivatives 815ms 9.68% 18.51% 1956ms 23.23% __GI___exp 1ms 0.012% 18.52% 1799ms 21.37% MonodomainProblem::WriteOneStep 0 0% 18.52% 1729ms 20.54% H5Dwrite 1ms 0.012% 18.53% 1729ms 20.54% Hdf5DataWriter::PutVector 4ms 0.048% 18.58% 1722ms 20.45% H5D__write 22ms 0.26% 18.84% 1572ms 18.67% AbstractCardiacTissue::UpdateCaches (inline) 432ms 5.13% 23.97% 1529ms 18.16% CellLuoRudy1991FromCellML::GetIIonic 908ms 10.79% 34.75% 1049ms 12.46% __ieee754_exp_fma 0 0% 34.75% 1030ms 12.23% H5D__chunk_collective_write 26ms 0.31% 35.06% 1030ms 12.23% H5F_set_coll_metadata_reads 1ms 0.012% 35.08% 1005ms 11.94% LinearSystem::Solve 0 0% 35.08% 942ms 11.19% KSPSolve 1ms 0.012% 35.09% 942ms 11.19% KSPSolve_Private 4ms 0.048% 35.13% 937ms 11.13% KSPSolve_CG 12ms 0.14% 35.28% 914ms 10.86% H5FD_s3comms_uriencode 13ms 0.15% 35.43% 726ms 8.62% 1ms 0.012% 35.44% 710ms 8.43% H5F_block_write 1ms 0.012% 35.46% 709ms 8.42% H5F__accum_write 0 0% 35.46% 709ms 8.42% H5PB_write 0 0% 35.46% 708ms 8.41% H5FD_write 0 0% 35.46% 649ms 7.71% H5D__mpio_select_write 2ms 0.024% 35.48% 641ms 7.61% std::pow (inline) 2ms 0.024% 35.50% 639ms 7.59% H5D__chunk_cacheable 76ms 0.9% 36.41% 639ms 7.59% __pow 0 0% 36.41% 622ms 7.39% PMPI_File_write_at_all 605ms 7.19% 43.59% 610ms 7.25% __GI_pwritev64 174ms 2.07% 45.66% 565ms 6.71% H5S_select_iterate 56ms 0.67% 46.32% 563ms 6.69% __ieee754_pow_fma 254ms 3.02% 49.34% 549ms 6.52% MonodomainSolver::SetupLinearSystem 0 0% 49.34% 516ms 6.13% PCApply 1ms 0.012% 49.35% 514ms 6.11% PCApply_BJacobi_Singleblock 1ms 0.012% 49.36% 501ms 5.95% KSPSolve_PREONLY 1ms 0.012% 49.38% 500ms 5.94% MatSolve 0 0% 49.38% 500ms 5.94% PCApply_ICC 496ms 5.89% 55.27% 499ms 5.93% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 55.27% 425ms 5.05% MatMult 421ms 5.00% 60.27% 425ms 5.05% MatMult_SeqAIJ 44ms 0.52% 60.79% 401ms 4.76% H5D__chunk_set_sizes 0 0% 60.79% 341ms 4.05% KSP_PCApply.lto_priv.7 235ms 2.79% 63.58% 254ms 3.02% exp_inline (inline) 34ms 0.4% 63.99% 248ms 2.95% H5S_mpio_space_type 243ms 2.89% 66.87% 243ms 2.89% log_inline (inline) 126ms 1.50% 68.37% 235ms 2.79% CellLuoRudy1991FromCellML::VerifyStateVariables 1ms 0.012% 68.38% 205ms 2.43% KSPConvergedDefault 0 0% 68.38% 177ms 2.10% KSP_PCApply 10ms 0.12% 68.50% 140ms 1.66% H5VM_chunk_index 51ms 0.61% 69.11% 138ms 1.64% __GI___libc_malloc 90ms 1.07% 70.17% 132ms 1.57% top12 (inline) 11ms 0.13% 70.31% 123ms 1.46% ompi_datatype_destroy 5ms 0.059% 70.36% 120ms 1.43% __GI___libc_free 0 0% 70.36% 119ms 1.41% MPI_Type_free 88ms 1.05% 71.41% 117ms 1.39% _int_malloc 78ms 0.93% 72.34% 115ms 1.37% _int_free 20ms 0.24% 72.57% 106ms 1.26% ompi_datatype_release_args 0 0% 72.57% 106ms 1.26% ompi_info_register_framework_params 4ms 0.048% 72.62% 105ms 1.25% ompi_datatype_create 103ms 1.22% 73.84% 103ms 1.22% __ieee754_log_fma 101ms 1.20% 75.04% 101ms 1.20% [libchaste_heart.so] 98ms 1.16% 76.21% 98ms 1.16% ddot_ 21ms 0.25% 76.46% 93ms 1.10% AbstractCardiacCell::SetVoltage (partial-inline) 53ms 0.63% 77.09% 92ms 1.09% AbstractOneStepIvpOdeSolver::Solve 92ms 1.09% 78.18% 92ms 1.09% [libm.so.6] 21ms 0.25% 78.43% 82ms 0.97% H5S_set_version 80ms 0.95% 79.38% 80ms 0.95% asuint64 (inline) 56ms 0.67% 80.05% 74ms 0.88% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 70ms 0.83% 80.88% 70ms 0.83% H5VM_chunk_index_scaled 32ms 0.38% 81.26% 69ms 0.82% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 0 0% 81.26% 69ms 0.82% Hdf5DataWriter::PutUnlimitedVariable 45ms 0.53% 81.79% 65ms 0.77% TimeStepper::TimeStepper 29ms 0.34% 82.14% 64ms 0.76% H5S_hyper_add_span_element 26ms 0.31% 82.44% 64ms 0.76% __libc_calloc 2ms 0.024% 82.47% 63ms 0.75% PMPI_Type_create_resized 62ms 0.74% 83.20% 62ms 0.74% __memcpy_avx512_unaligned_erms 31ms 0.37% 83.57% 61ms 0.72% H5VM_array_calc 61ms 0.72% 84.30% 61ms 0.72% H5VM_array_offset_pre 0 0% 84.30% 60ms 0.71% VecNorm 46ms 0.55% 84.84% 58ms 0.69% AbstractParameterisedSystem::GetAnyVariable 0 0% 84.84% 57ms 0.68% VecNorm_Seq 1ms 0.012% 84.86% 57ms 0.68% VecTDot 0 0% 84.86% 57ms 0.68% std::vector::_M_assign_aux (inline) 0 0% 84.86% 57ms 0.68% std::vector::assign (inline) 50ms 0.59% 85.45% 56ms 0.67% AbstractParameterisedSystem::SetAnyVariable 38ms 0.45% 85.90% 56ms 0.67% TimeStepper::AdvanceOneTimeStep 0 0% 85.90% 55ms 0.65% VecTDot_Seq 0 0% 85.90% 55ms 0.65% VecXDot_Seq_Private.constprop.0 18ms 0.21% 86.11% 53ms 0.63% AbstractCardiacCell::GetVoltage (partial-inline) 53ms 0.63% 86.74% 53ms 0.63% std::vector::operator[] (inline) 1ms 0.012% 86.76% 52ms 0.62% VecDuplicate 0 0% 86.76% 52ms 0.62% ompi_datatype_duplicate 6ms 0.071% 86.83% 51ms 0.61% VecDuplicate_MPI 1ms 0.012% 86.84% 51ms 0.61% opal_datatype_create_desc 50ms 0.59% 87.43% 50ms 0.59% ReplicatableVector::operator[] 49ms 0.58% 88.02% 49ms 0.58% [libchaste_ode.so] 12ms 0.14% 88.16% 48ms 0.57% ompi_datatype_set_args 2ms 0.024% 88.18% 47ms 0.56% std::__copy_move::__copy_m (inline) 0 0% 88.18% 47ms 0.56% std::__copy_move_a (inline) 0 0% 88.18% 47ms 0.56% std::__copy_move_a1 (inline) 0 0% 88.18% 47ms 0.56% std::__copy_move_a2 (inline) 0 0% 88.18% 47ms 0.56% std::copy (inline) 0 0% 88.18% 46ms 0.55% PMPI_File_set_view 1ms 0.012% 88.19% 45ms 0.53% MPI_Type_create_hindexed