File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 68493ms, 91.24% of 75066ms total Dropped 1003 nodes (cum <= 375.33ms) flat flat% sum% cum cum% 0 0% 0% 75048ms 100% __libc_start_call_main 0 0% 0% 75048ms 100% __libc_start_main_impl 0 0% 0% 75048ms 100% _start 0 0% 0% 75046ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 75046ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 75046ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 75046ms 100% main 0 0% 0% 75012ms 99.93% CxxTest::RealTestDescription::run 0 0% 0% 75012ms 99.93% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 75012ms 99.93% CxxTest::TestRunner::runTest (inline) 0 0% 0% 75012ms 99.93% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 75012ms 99.93% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 75011ms 99.93% AbstractConvergenceTester::Converge 5ms 0.0067% 0.0067% 74229ms 98.88% AbstractCardiacProblem::Solve 2ms 0.0027% 0.0093% 73752ms 98.25% AbstractDynamicLinearPdeSolver::Solve 0 0% 0.0093% 43752ms 58.28% LinearSystem::Solve 1ms 0.0013% 0.011% 43475ms 57.92% KSPSolve 14ms 0.019% 0.029% 43474ms 57.91% KSPSolve_Private 13ms 0.017% 0.047% 43253ms 57.62% KSPSolve_SYMMLQ 114ms 0.15% 0.2% 23773ms 31.67% AbstractCardiacTissue::SolveCellSystems 3ms 0.004% 0.2% 22534ms 30.02% PCApply 7ms 0.0093% 0.21% 22522ms 30.00% PCApply_BJacobi_Singleblock 3ms 0.004% 0.22% 21181ms 28.22% KSPSolve_PREONLY (partial-inline) 3ms 0.004% 0.22% 20498ms 27.31% PCApply_ICC 9ms 0.012% 0.23% 20495ms 27.30% MatSolve 20329ms 27.08% 27.31% 20486ms 27.29% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 4ms 0.0053% 27.32% 19455ms 25.92% KSP_PCApply.lto_priv.18 383ms 0.51% 27.83% 18778ms 25.02% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 5ms 0.0067% 27.84% 18510ms 24.66% MatMult 74ms 0.099% 27.93% 18505ms 24.65% MatMult_SeqAIJ 18412ms 24.53% 52.46% 18502ms 24.65% MatMult_SeqAIJ_Inode (inline) 3152ms 4.20% 56.66% 16230ms 21.62% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 1628ms 2.17% 58.83% 10878ms 14.49% CardiacNewtonSolver::Solve 3782ms 5.04% 63.87% 6495ms 8.65% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 425ms 0.57% 64.43% 5456ms 7.27% BidomainSolver::SetupLinearSystem 59ms 0.079% 64.51% 4452ms 5.93% AbstractCardiacTissue::UpdateCaches (inline) 1ms 0.0013% 64.51% 4341ms 5.78% KSP_PCApply (partial-inline) 1047ms 1.39% 65.91% 4205ms 5.60% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 4ms 0.0053% 65.91% 3963ms 5.28% KSPConvergedDefault 2513ms 3.35% 69.26% 2593ms 3.45% __ieee754_log_fma 0 0% 69.26% 2446ms 3.26% boost::numeric::ublas::norm_inf (inline) 1514ms 2.02% 71.28% 2446ms 3.26% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 71.28% 2446ms 3.26% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 71.28% 2446ms 3.26% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 36ms 0.048% 71.33% 2147ms 2.86% std::pow (inline) 353ms 0.47% 71.80% 2111ms 2.81% __pow 3ms 0.004% 71.80% 2106ms 2.81% MatNullSpaceRemove 186ms 0.25% 72.05% 2057ms 2.74% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1157ms 1.54% 73.59% 2039ms 2.72% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 206ms 0.27% 73.86% 1725ms 2.30% __ieee754_pow_fma 1702ms 2.27% 76.13% 1702ms 2.27% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 16ms 0.021% 76.15% 1575ms 2.10% VecAXPY 1ms 0.0013% 76.15% 1559ms 2.08% VecAXPY_Seq 1551ms 2.07% 78.22% 1551ms 2.07% daxpy_ 1395ms 1.86% 80.08% 1395ms 1.86% ddot_ 1ms 0.0013% 80.08% 1390ms 1.85% VecMDot 4ms 0.0053% 80.09% 1389ms 1.85% VecMXDot_Private 1382ms 1.84% 81.93% 1384ms 1.84% VecMDot_Seq 1316ms 1.75% 83.68% 1316ms 1.75% __memcpy_avx512_unaligned_erms 0 0% 83.68% 1301ms 1.73% PetscMemcpy (inline) 12ms 0.016% 83.70% 1161ms 1.55% VecCopy 8ms 0.011% 83.71% 1161ms 1.55% VecDot 0 0% 83.71% 1153ms 1.54% VecDot_Seq 4ms 0.0053% 83.71% 1153ms 1.54% VecXDot_Seq_Private.constprop.0 3ms 0.004% 83.72% 1148ms 1.53% VecCopy_Seq (partial-inline) 991ms 1.32% 85.04% 1143ms 1.52% exp_inline (inline) 2ms 0.0027% 85.04% 1092ms 1.45% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 85.04% 872ms 1.16% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 85.04% 872ms 1.16% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 85.04% 872ms 1.16% boost_numeric_ublas_abs (inline) 872ms 1.16% 86.20% 872ms 1.16% std::abs (inline) 7ms 0.0093% 86.21% 871ms 1.16% AbstractFeVolumeIntegralAssembler::AssembleOnElement 0 0% 86.21% 736ms 0.98% AbstractFeAssemblerInterface::AssembleMatrix (inline) 2ms 0.0027% 86.21% 713ms 0.95% VecMAXPY 710ms 0.95% 87.16% 711ms 0.95% VecMAXPY_Seq 518ms 0.69% 87.85% 703ms 0.94% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 661ms 0.88% 88.73% 661ms 0.88% [libchaste_heart.so] 0 0% 88.73% 627ms 0.84% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.73% 627ms 0.84% CuboidMeshConstructor::Construct 0 0% 88.73% 627ms 0.84% DistributedTetrahedralMesh::ConstructCuboid 0 0% 88.73% 564ms 0.75% Element::Element 3ms 0.004% 88.73% 543ms 0.72% boost::numeric::ublas::matrix_assign (inline) 83ms 0.11% 88.84% 540ms 0.72% boost::numeric::ublas::indexing_matrix_assign 4ms 0.0053% 88.85% 537ms 0.72% AbstractTetrahedralElement::CalculateJacobian 1ms 0.0013% 88.85% 502ms 0.67% AbstractBidomainSolver::FinaliseLinearSystem 135ms 0.18% 89.03% 501ms 0.67% AbstractBidomainSolver::CheckCompatibilityCondition 2ms 0.0027% 89.03% 501ms 0.67% AbstractTetrahedralElement::AbstractTetrahedralElement 1ms 0.0013% 89.03% 444ms 0.59% VecDuplicate 0 0% 89.03% 439ms 0.58% BidomainProblem::WriteOneStep 10ms 0.013% 89.05% 436ms 0.58% VecScale 4ms 0.0053% 89.05% 428ms 0.57% BidomainAssembler::ComputeMatrixTerm 2ms 0.0027% 89.05% 426ms 0.57% VecScale_Seq 0 0% 89.05% 421ms 0.56% PetscMemzero (inline) 421ms 0.56% 89.62% 421ms 0.56% dscal_ 6ms 0.008% 89.62% 420ms 0.56% boost::numeric::ublas::c_matrix::c_matrix (inline) 419ms 0.56% 90.18% 419ms 0.56% __memset_avx512_unaligned_erms 410ms 0.55% 90.73% 410ms 0.55% ReplicatableVector::operator[] 4ms 0.0053% 90.73% 383ms 0.51% VecNorm 383ms 0.51% 91.24% 383ms 0.51% std::isinf (inline)