File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 7384ms, 88.77% of 8318ms total Dropped 626 nodes (cum <= 41.59ms) flat flat% sum% cum cum% 0 0% 0% 8311ms 99.92% __libc_start_call_main 0 0% 0% 8311ms 99.92% __libc_start_main_impl 0 0% 0% 8311ms 99.92% _start 0 0% 0% 8309ms 99.89% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 8309ms 99.89% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 8309ms 99.89% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 8309ms 99.89% main 0 0% 0% 8275ms 99.48% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 8275ms 99.48% CxxTest::TestRunner::runTest (inline) 0 0% 0% 8275ms 99.48% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.012% 0.012% 8260ms 99.30% AbstractCardiacProblem::Solve 1ms 0.012% 0.024% 6597ms 79.31% AbstractDynamicLinearPdeSolver::Solve 26ms 0.31% 0.34% 4959ms 59.62% AbstractCardiacTissue::SolveCellSystems 42ms 0.5% 0.84% 2951ms 35.48% AbstractCardiacCell::ComputeExceptVoltage 49ms 0.59% 1.43% 2603ms 31.29% AbstractOneStepIvpOdeSolver::InternalSolve 88ms 1.06% 2.49% 2269ms 27.28% EulerIvpOdeSolver::CalculateNextYValue 501ms 6.02% 8.51% 2158ms 25.94% CellLuoRudy1991FromCellML::EvaluateYDerivatives 856ms 10.29% 18.80% 1964ms 23.61% __GI___exp 23ms 0.28% 19.08% 1620ms 19.48% AbstractCardiacTissue::UpdateCaches (inline) 1ms 0.012% 19.09% 1613ms 19.39% MonodomainProblem::WriteOneStep 455ms 5.47% 24.56% 1583ms 19.03% CellLuoRudy1991FromCellML::GetIIonic 0 0% 24.56% 1561ms 18.77% Hdf5DataWriter::PutVector 0 0% 24.56% 1554ms 18.68% H5Dwrite 0 0% 24.56% 1545ms 18.57% H5D__write 890ms 10.70% 35.26% 1019ms 12.25% __ieee754_exp_fma 0 0% 35.26% 965ms 11.60% LinearSystem::Solve 0 0% 35.26% 908ms 10.92% H5D__chunk_collective_write 8ms 0.096% 35.36% 908ms 10.92% H5F_set_coll_metadata_reads 1ms 0.012% 35.37% 899ms 10.81% KSPSolve 2ms 0.024% 35.39% 899ms 10.81% KSPSolve_Private 1ms 0.012% 35.41% 896ms 10.77% KSPSolve_CG 5ms 0.06% 35.47% 815ms 9.80% H5FD_s3comms_uriencode 2ms 0.024% 35.49% 665ms 7.99% std::pow (inline) 9ms 0.11% 35.60% 664ms 7.98% 83ms 1% 36.60% 663ms 7.97% __pow 292ms 3.51% 40.11% 661ms 7.95% MonodomainSolver::SetupLinearSystem 1ms 0.012% 40.12% 645ms 7.75% H5FD_write 0 0% 40.12% 645ms 7.75% H5F__accum_write 0 0% 40.12% 645ms 7.75% H5F_block_write 0 0% 40.12% 645ms 7.75% H5PB_write 2ms 0.024% 40.14% 590ms 7.09% H5D__chunk_cacheable 0 0% 40.14% 589ms 7.08% H5D__mpio_select_write 53ms 0.64% 40.78% 580ms 6.97% __ieee754_pow_fma 1ms 0.012% 40.79% 577ms 6.94% PMPI_File_write_at_all 565ms 6.79% 47.58% 567ms 6.82% __GI_pwritev64 169ms 2.03% 49.62% 518ms 6.23% H5S_select_iterate 0 0% 49.62% 507ms 6.10% PCApply 1ms 0.012% 49.63% 505ms 6.07% PCApply_BJacobi_Singleblock 1ms 0.012% 49.64% 494ms 5.94% KSPSolve_PREONLY 0 0% 49.64% 490ms 5.89% MatSolve 483ms 5.81% 55.45% 490ms 5.89% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 55.45% 490ms 5.89% PCApply_ICC 0 0% 55.45% 454ms 5.46% MatMult 454ms 5.46% 60.90% 454ms 5.46% MatMult_SeqAIJ 45ms 0.54% 61.45% 356ms 4.28% H5D__chunk_set_sizes 0 0% 61.45% 345ms 4.15% KSP_PCApply.lto_priv.7 136ms 1.64% 63.08% 273ms 3.28% CellLuoRudy1991FromCellML::VerifyStateVariables 265ms 3.19% 66.27% 265ms 3.19% log_inline (inline) 223ms 2.68% 68.95% 246ms 2.96% exp_inline (inline) 18ms 0.22% 69.16% 198ms 2.38% H5S_mpio_space_type 0 0% 69.16% 185ms 2.22% KSPConvergedDefault 0 0% 69.16% 164ms 1.97% KSP_PCApply 118ms 1.42% 70.58% 150ms 1.80% top12 (inline) 7ms 0.084% 70.67% 143ms 1.72% H5VM_chunk_index 10ms 0.12% 70.79% 113ms 1.36% __GI___libc_free 45ms 0.54% 71.33% 111ms 1.33% __GI___libc_malloc 105ms 1.26% 72.59% 105ms 1.26% [libchaste_heart.so] 64ms 0.77% 73.36% 103ms 1.24% _int_free 3ms 0.036% 73.40% 100ms 1.20% MPI_Type_free 10ms 0.12% 73.52% 100ms 1.20% ompi_datatype_destroy 49ms 0.59% 74.10% 91ms 1.09% AbstractOneStepIvpOdeSolver::Solve 89ms 1.07% 75.17% 89ms 1.07% [libm.so.6] 88ms 1.06% 76.23% 88ms 1.06% H5VM_chunk_index_scaled 24ms 0.29% 76.52% 87ms 1.05% AbstractCardiacCell::SetVoltage (partial-inline) 20ms 0.24% 76.76% 86ms 1.03% ompi_datatype_release_args 0 0% 76.76% 86ms 1.03% ompi_info_register_framework_params 60ms 0.72% 77.48% 83ms 1% TimeStepper::TimeStepper 83ms 1% 78.48% 83ms 1% ddot_ 62ms 0.75% 79.23% 80ms 0.96% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 78ms 0.94% 80.16% 78ms 0.94% __ieee754_log_fma 3ms 0.036% 80.20% 74ms 0.89% ompi_datatype_create 54ms 0.65% 80.85% 73ms 0.88% _int_malloc 18ms 0.22% 81.07% 64ms 0.77% H5S_set_version 29ms 0.35% 81.41% 63ms 0.76% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 31ms 0.37% 81.79% 57ms 0.69% std::__cxx11::basic_string::basic_string 0 0% 81.79% 55ms 0.66% VecTDot 0 0% 81.79% 55ms 0.66% VecTDot_Seq 1ms 0.012% 81.80% 55ms 0.66% VecXDot_Seq_Private.constprop.0 0 0% 81.80% 55ms 0.66% std::vector::_M_assign_aux (inline) 0 0% 81.80% 55ms 0.66% std::vector::assign (inline) 0 0% 81.80% 54ms 0.65% VecDuplicate 0 0% 81.80% 54ms 0.65% VecDuplicate_MPI 45ms 0.54% 82.34% 52ms 0.63% AbstractParameterisedSystem::SetAnyVariable 0 0% 82.34% 51ms 0.61% Hdf5DataWriter::PutUnlimitedVariable 28ms 0.34% 82.68% 51ms 0.61% TimeStepper::AdvanceOneTimeStep 25ms 0.3% 82.98% 50ms 0.6% AbstractCardiacCell::GetVoltage (partial-inline) 50ms 0.6% 83.58% 50ms 0.6% asuint64 (inline) 49ms 0.59% 84.17% 49ms 0.59% std::vector::operator[] (inline) 48ms 0.58% 84.74% 48ms 0.58% H5VM_array_offset_pre 1ms 0.012% 84.76% 48ms 0.58% VecNorm 33ms 0.4% 85.15% 47ms 0.57% __libc_calloc 47ms 0.57% 85.72% 47ms 0.57% __memcpy_avx512_unaligned_erms 26ms 0.31% 86.03% 46ms 0.55% H5VM_array_calc 0 0% 86.03% 46ms 0.55% VecNorm_Seq 45ms 0.54% 86.57% 45ms 0.54% ReplicatableVector::operator[] 26ms 0.31% 86.88% 44ms 0.53% H5S_hyper_add_span_element 11ms 0.13% 87.02% 44ms 0.53% ompi_datatype_set_args 44ms 0.53% 87.55% 44ms 0.53% std::vector::size (inline) 35ms 0.42% 87.97% 43ms 0.52% AbstractParameterisedSystem::GetAnyVariable 2ms 0.024% 87.99% 43ms 0.52% PMPI_Type_create_resized 23ms 0.28% 88.27% 43ms 0.52% malloc_consolidate 42ms 0.5% 88.77% 42ms 0.5% TimeStepper::GetNextTimeStep