File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12837ms, 85.83% of 14957ms total Dropped 732 nodes (cum <= 74.78ms) flat flat% sum% cum cum% 0 0% 0% 14949ms 99.95% __libc_start_call_main 0 0% 0% 14949ms 99.95% __libc_start_main_impl 0 0% 0% 14949ms 99.95% _start 0 0% 0% 14947ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14947ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14947ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14947ms 99.93% main 0 0% 0% 14909ms 99.68% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14909ms 99.68% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14909ms 99.68% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.013% 0.013% 14887ms 99.53% AbstractCardiacProblem::Solve 6ms 0.04% 0.053% 11413ms 76.31% AbstractDynamicLinearPdeSolver::Solve 43ms 0.29% 0.34% 9189ms 61.44% AbstractCardiacTissue::SolveCellSystems 111ms 0.74% 1.08% 5646ms 37.75% AbstractCardiacCell::ComputeExceptVoltage 174ms 1.16% 2.25% 4868ms 32.55% AbstractOneStepIvpOdeSolver::InternalSolve 174ms 1.16% 3.41% 4156ms 27.79% EulerIvpOdeSolver::CalculateNextYValue 890ms 5.95% 9.36% 3926ms 26.25% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1721ms 11.51% 20.87% 3636ms 24.31% __GI___exp 1ms 0.0067% 20.87% 3407ms 22.78% MonodomainProblem::WriteOneStep 3ms 0.02% 20.89% 3244ms 21.69% Hdf5DataWriter::PutVector 0 0% 20.89% 3210ms 21.46% H5Dwrite 4ms 0.027% 20.92% 3185ms 21.29% H5D__write 84ms 0.56% 21.48% 2642ms 17.66% AbstractCardiacTissue::UpdateCaches (inline) 748ms 5.00% 26.48% 2524ms 16.88% CellLuoRudy1991FromCellML::GetIIonic 1693ms 11.32% 37.80% 1834ms 12.26% __ieee754_exp_fma 0 0% 37.80% 1823ms 12.19% H5D__chunk_collective_write 20ms 0.13% 37.94% 1823ms 12.19% H5F_set_coll_metadata_reads 23ms 0.15% 38.09% 1596ms 10.67% H5FD_s3comms_uriencode 1ms 0.0067% 38.10% 1428ms 9.55% LinearSystem::Solve 0 0% 38.10% 1310ms 8.76% KSPSolve 4ms 0.027% 38.12% 1310ms 8.76% KSPSolve_Private 4ms 0.027% 38.15% 1299ms 8.68% KSPSolve_CG 9ms 0.06% 38.21% 1225ms 8.19% H5D__chunk_cacheable 3ms 0.02% 38.23% 1191ms 7.96% H5F_block_write 2ms 0.013% 38.24% 1188ms 7.94% H5PB_write 51ms 0.34% 38.58% 1186ms 7.93% 4ms 0.027% 38.61% 1185ms 7.92% H5FD_write 0 0% 38.61% 1185ms 7.92% H5F__accum_write 2ms 0.013% 38.62% 1092ms 7.30% H5D__mpio_select_write 426ms 2.85% 41.47% 1053ms 7.04% H5S_select_iterate 0 0% 41.47% 970ms 6.49% PMPI_File_write_at_all 944ms 6.31% 47.78% 948ms 6.34% __GI_pwritev64 6ms 0.04% 47.82% 915ms 6.12% std::pow (inline) 83ms 0.55% 48.38% 909ms 6.08% __pow 96ms 0.64% 49.02% 826ms 5.52% __ieee754_pow_fma 349ms 2.33% 51.35% 765ms 5.11% MonodomainSolver::SetupLinearSystem 339ms 2.27% 53.62% 711ms 4.75% CellLuoRudy1991FromCellML::VerifyStateVariables 1ms 0.0067% 53.63% 685ms 4.58% PCApply 0 0% 53.63% 683ms 4.57% PCApply_BJacobi_Singleblock 78ms 0.52% 54.15% 648ms 4.33% H5D__chunk_set_sizes 0 0% 54.15% 637ms 4.26% KSPSolve_PREONLY 2ms 0.013% 54.16% 631ms 4.22% MatSolve 0 0% 54.16% 631ms 4.22% PCApply_ICC 623ms 4.17% 58.33% 629ms 4.21% MatSolve_SeqSBAIJ_1_NaturalOrdering 2ms 0.013% 58.34% 603ms 4.03% MatMult 600ms 4.01% 62.35% 601ms 4.02% MatMult_SeqAIJ 67ms 0.45% 62.80% 506ms 3.38% H5S_mpio_space_type 1ms 0.0067% 62.81% 479ms 3.20% KSP_PCApply.lto_priv.7 372ms 2.49% 65.29% 372ms 2.49% log_inline (inline) 305ms 2.04% 67.33% 318ms 2.13% exp_inline (inline) 0 0% 67.33% 267ms 1.79% KSPConvergedDefault 122ms 0.82% 68.15% 238ms 1.59% TimeStepper::TimeStepper 50ms 0.33% 68.48% 212ms 1.42% __GI___libc_malloc 0 0% 68.48% 209ms 1.40% KSP_PCApply 138ms 0.92% 69.41% 194ms 1.30% AbstractOneStepIvpOdeSolver::Solve 164ms 1.10% 70.50% 194ms 1.30% _int_malloc 129ms 0.86% 71.36% 193ms 1.29% top12 (inline) 85ms 0.57% 71.93% 187ms 1.25% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 185ms 1.24% 73.17% 185ms 1.24% [libchaste_heart.so] 10ms 0.067% 73.24% 184ms 1.23% ompi_datatype_destroy 22ms 0.15% 73.38% 183ms 1.22% H5VM_chunk_index 34ms 0.23% 73.61% 177ms 1.18% __GI___libc_free 176ms 1.18% 74.79% 176ms 1.18% std::isinf (inline) 4ms 0.027% 74.81% 175ms 1.17% MPI_Type_free 8ms 0.053% 74.87% 175ms 1.17% ompi_datatype_create 1ms 0.0067% 74.87% 162ms 1.08% Hdf5DataWriter::PutUnlimitedVariable 47ms 0.31% 75.19% 156ms 1.04% ompi_datatype_release_args 6ms 0.04% 75.23% 156ms 1.04% ompi_info_register_framework_params 134ms 0.9% 76.12% 149ms 1% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 77ms 0.51% 76.64% 147ms 0.98% H5S_hyper_add_span_element 35ms 0.23% 76.87% 144ms 0.96% AbstractCardiacCell::SetVoltage (partial-inline) 58ms 0.39% 77.26% 143ms 0.96% _int_free 139ms 0.93% 78.19% 139ms 0.93% ddot_ 136ms 0.91% 79.10% 136ms 0.91% TimeStepper::CalculateNextTime 23ms 0.15% 79.25% 129ms 0.86% H5S_set_version 1ms 0.0067% 79.26% 128ms 0.86% PMPI_File_set_view 92ms 0.62% 79.88% 118ms 0.79% AbstractParameterisedSystem::GetAnyVariable 114ms 0.76% 80.64% 114ms 0.76% __ieee754_log_fma 42ms 0.28% 80.92% 112ms 0.75% std::__cxx11::basic_string::basic_string 50ms 0.33% 81.25% 107ms 0.72% AbstractCardiacCell::GetVoltage (partial-inline) 40ms 0.27% 81.52% 106ms 0.71% H5VM_array_calc 2ms 0.013% 81.53% 104ms 0.7% VecDuplicate 4ms 0.027% 81.56% 102ms 0.68% VecDuplicate_MPI 3ms 0.02% 81.58% 102ms 0.68% VecNorm 2ms 0.013% 81.59% 101ms 0.68% PMPI_Type_create_resized 2ms 0.013% 81.61% 100ms 0.67% ompi_datatype_duplicate 95ms 0.64% 82.24% 95ms 0.64% __memcpy_avx_unaligned_erms 3ms 0.02% 82.26% 94ms 0.63% VecNorm_Seq 2ms 0.013% 82.28% 91ms 0.61% opal_datatype_create_desc 37ms 0.25% 82.52% 89ms 0.6% TimeStepper::AdvanceOneTimeStep 30ms 0.2% 82.72% 89ms 0.6% __libc_calloc 1ms 0.0067% 82.73% 88ms 0.59% H5Pcreate 9ms 0.06% 82.79% 86ms 0.57% H5P_create_id 34ms 0.23% 83.02% 86ms 0.57% ompi_datatype_set_args 75ms 0.5% 83.52% 83ms 0.55% AbstractParameterisedSystem::SetAnyVariable 83ms 0.55% 84.07% 83ms 0.55% [libm.so.6] 82ms 0.55% 84.62% 82ms 0.55% H5VM_array_offset_pre 10ms 0.067% 84.69% 82ms 0.55% PMPI_Type_vector 2ms 0.013% 84.70% 81ms 0.54% H5D__chunk_allocated 1ms 0.0067% 84.71% 80ms 0.53% VecTDot 79ms 0.53% 85.24% 79ms 0.53% H5VM_chunk_index_scaled 7ms 0.047% 85.28% 78ms 0.52% MPI_Type_contiguous 77ms 0.51% 85.80% 78ms 0.52% std::vector::operator[] (inline) 1ms 0.0067% 85.81% 76ms 0.51% H5D__select_write 2ms 0.013% 85.82% 75ms 0.5% H5Dgather 0 0% 85.82% 75ms 0.5% VecTDot_Seq 1ms 0.0067% 85.83% 75ms 0.5% VecXDot_Seq_Private.constprop.0