Chaste Commit::baa90ac2819b962188b7562f2326be23c47859a7
AbstractLinearParabolicPdeSystemForCoupledOdeSystem.hpp
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35
36#ifndef ABSTRACTLINEARPARABOLICPDESYSTEMFORCOUPLEDODESYSTEM_HPP_
37#define ABSTRACTLINEARPARABOLICPDESYSTEMFORCOUPLEDODESYSTEM_HPP_
38
40#include "ChastePoint.hpp"
41#include "Node.hpp"
42#include "Element.hpp"
43#include <petscvec.h>
44
59template<unsigned ELEMENT_DIM, unsigned SPACE_DIM=ELEMENT_DIM, unsigned PROBLEM_DIM=1>
61{
62public:
69 virtual double ComputeDuDtCoefficientFunction(const ChastePoint<SPACE_DIM>& rX, unsigned pdeIndex)=0;
70
79 virtual double ComputeSourceTerm(const ChastePoint<SPACE_DIM>& rX,
80 c_vector<double,PROBLEM_DIM>& rU,
81 std::vector<double>& rOdeSolution,
82 unsigned pdeIndex)=0;
83
92 virtual double ComputeSourceTermAtNode(const Node<SPACE_DIM>& rNode,
93 c_vector<double,PROBLEM_DIM>& rU,
94 std::vector<double>& rOdeSolution,
95 unsigned pdeIndex);
96
104 virtual c_matrix<double, SPACE_DIM, SPACE_DIM> ComputeDiffusionTerm(const ChastePoint<SPACE_DIM>& rX,
105 unsigned pdeIndex,
106 Element<ELEMENT_DIM,SPACE_DIM>* pElement=NULL)=0;
107
113};
114
116// Implementation
118
119template<unsigned ELEMENT_DIM, unsigned SPACE_DIM, unsigned PROBLEM_DIM>
120double AbstractLinearParabolicPdeSystemForCoupledOdeSystem<ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM>::ComputeSourceTermAtNode(const Node<SPACE_DIM>& rNode, c_vector<double,PROBLEM_DIM>& rU, std::vector<double>& rOdeSolution, unsigned pdeIndex)
121{
122 return ComputeSourceTerm(rNode.GetPoint(), rU, rOdeSolution, pdeIndex);
123}
124
125#endif /*ABSTRACTLINEARPARABOLICPDESYSTEMFORCOUPLEDODESYSTEM_HPP_*/
virtual double ComputeSourceTerm(const ChastePoint< SPACE_DIM > &rX, c_vector< double, PROBLEM_DIM > &rU, std::vector< double > &rOdeSolution, unsigned pdeIndex)=0
virtual c_matrix< double, SPACE_DIM, SPACE_DIM > ComputeDiffusionTerm(const ChastePoint< SPACE_DIM > &rX, unsigned pdeIndex, Element< ELEMENT_DIM, SPACE_DIM > *pElement=NULL)=0
virtual double ComputeDuDtCoefficientFunction(const ChastePoint< SPACE_DIM > &rX, unsigned pdeIndex)=0
virtual double ComputeSourceTermAtNode(const Node< SPACE_DIM > &rNode, c_vector< double, PROBLEM_DIM > &rU, std::vector< double > &rOdeSolution, unsigned pdeIndex)
Definition Node.hpp:59
ChastePoint< SPACE_DIM > GetPoint() const
Definition Node.cpp:133