AdhesionPottsUpdateRule.hpp

/*
 
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*/
 
#ifndef ADHESIONUPDATERULE_HPP_
#define ADHESIONUPDATERULE_HPP_
 
#include "ChasteSerialization.hpp"
#include <boost/serialization/base_object.hpp>
 
#include "AbstractPottsUpdateRule.hpp"
#include "PottsBasedCellPopulation.hpp"
 
template<unsigned DIM>
class AdhesionPottsUpdateRule : public AbstractPottsUpdateRule<DIM>
{
friend class TestPottsUpdateRules;
 
private:
 
    double mCellCellAdhesionEnergyParameter;
 
    double mCellBoundaryAdhesionEnergyParameter;
 
    friend class boost::serialization::access;
    template<class Archive>
    void serialize(Archive & archive, const unsigned int version)
    {
        archive & boost::serialization::base_object<AbstractPottsUpdateRule<DIM> >(*this);
        archive & mCellCellAdhesionEnergyParameter;
        archive & mCellBoundaryAdhesionEnergyParameter;
    }
 
public:
 
    AdhesionPottsUpdateRule();
 
    virtual ~AdhesionPottsUpdateRule();
 
    double EvaluateHamiltonianContribution(unsigned currentNodeIndex,
                                           unsigned targetNodeIndex,
                                           PottsBasedCellPopulation<DIM>& rCellPopulation);
 
    virtual double GetCellCellAdhesionEnergy(CellPtr pCellA, CellPtr pCellB);
 
    virtual double GetCellBoundaryAdhesionEnergy(CellPtr pCell);
 
    double GetCellCellAdhesionEnergyParameter();
 
    double GetCellBoundaryAdhesionEnergyParameter();
 
    void SetCellCellAdhesionEnergyParameter(double cellCellAdhesionEnergyEnergyParameter);
 
    void SetCellBoundaryAdhesionEnergyParameter(double cellBoundaryAdhesionEnergyParameter);
 
    void OutputUpdateRuleParameters(out_stream& rParamsFile);
};
 
#include "SerializationExportWrapper.hpp"
EXPORT_TEMPLATE_CLASS_SAME_DIMS(AdhesionPottsUpdateRule)
 
#endif /*ADHESIONUPDATERULE_HPP_*/