Electrodes.hpp

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*/
 
#ifndef ELECTRODES_HPP_
#define ELECTRODES_HPP_
 
#include <boost/shared_ptr.hpp>
#include "ChasteSerialization.hpp"
#include <boost/serialization/split_member.hpp>
#include <boost/serialization/shared_ptr.hpp>
 
#include "AbstractTetrahedralMesh.hpp"
#include "DistributedVector.hpp"
#include "BoundaryConditionsContainer.hpp"
#include "ConstBoundaryCondition.hpp"
 
template<unsigned DIM>
class Electrodes
{
friend class TestBidomainWithBathProblem;
friend class TestElectrodes;
 
private:
    bool mGroundSecondElectrode;
    boost::shared_ptr<BoundaryConditionsContainer<DIM,DIM,2> > mpBoundaryConditionsContainer;
    double mStartTime;
    double mEndTime;
    bool mAreActive;
    AbstractTetrahedralMesh<DIM,DIM>* mpMesh;
 
    double mLeftElectrodeArea;
 
    double mRightElectrodeArea;
 
    void ComputeElectrodesAreasAndCheckEquality(unsigned index, double lowerValue, double upperValue);
 
    friend class boost::serialization::access;
    template<class Archive>
    void save(Archive & archive, const unsigned int version) const
    {
        archive & mGroundSecondElectrode;
        archive & mStartTime;
        archive & mEndTime;
        archive & mAreActive;
        archive & mpMesh;
        (*ProcessSpecificArchive<Archive>::Get()) & mpBoundaryConditionsContainer;
    }
    template<class Archive>
    void load(Archive & archive, const unsigned int version)
    {
        archive & mGroundSecondElectrode;
        archive & mStartTime;
        archive & mEndTime;
        archive & mAreActive;
        archive & mpMesh;
 
        (*ProcessSpecificArchive<Archive>::Get()) & mpBoundaryConditionsContainer;
        assert(mpBoundaryConditionsContainer);
        // Allow the new object to load itself from the archive.
        mpBoundaryConditionsContainer->LoadFromArchive(*ProcessSpecificArchive<Archive>::Get(), mpMesh);
    }
    BOOST_SERIALIZATION_SPLIT_MEMBER()
 
    
    Electrodes(){};
 
public:
 
 
    Electrodes(AbstractTetrahedralMesh<DIM,DIM>& rMesh); // implemented in cpp
 
    boost::shared_ptr<BoundaryConditionsContainer<DIM,DIM,2> > GetBoundaryConditionsContainer();
 
    bool SwitchOff(double time);
 
    bool SwitchOn(double time);
 
    double GetSwitchOnTime()
    {
        return mStartTime;
    }
 
    double GetSwitchOffTime()
    {
        return mEndTime;
    }
 
    bool HasGroundedElectrode()
    {
        return mGroundSecondElectrode;
    }
};
 
#include "SerializationExportWrapper.hpp"
EXPORT_TEMPLATE_CLASS_SAME_DIMS(Electrodes)
 
#endif /*ELECTRODES_HPP_*/