NodeAttributes.hpp

/*
 
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This file is part of Chaste.
 
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*/
 
#ifndef _NODEATTRIBUTES_HPP_
#define _NODEATTRIBUTES_HPP_
 
#include "UblasVectorInclude.hpp"
#include "ChasteSerialization.hpp"
#include <boost/serialization/vector.hpp>
 
template<unsigned SPACE_DIM>
class NodeAttributes
{
private:
 
    std::vector<double> mAttributes;
 
    unsigned mRegion;
 
    c_vector<double, SPACE_DIM> mAppliedForce;
 
    double mRadius;
 
    std::vector<unsigned> mNeighbourIndices;
 
    bool mNeighboursSetUp;
 
    bool mIsParticle;
 
    friend class boost::serialization::access;
 
    template<class Archive>
    void serialize(Archive & archive, const unsigned int version)
    {
        archive & mAttributes;
        archive & mRegion;
        archive & mRadius;
        archive & mNeighbourIndices;
        archive & mNeighboursSetUp;
        archive & mIsParticle;
 
        for (unsigned d = 0; d < SPACE_DIM; d++)
        {
            archive & mAppliedForce[d];
        }
    }
 
public:
 
    NodeAttributes();
 
    std::vector<double>& rGetAttributes();
 
    void AddAttribute(double attribute);
 
    unsigned GetRegion();
 
    void SetRegion(unsigned region);
 
    c_vector<double, SPACE_DIM>& rGetAppliedForce();
 
    void AddAppliedForceContribution(const c_vector<double, SPACE_DIM>& rForceContribution);
 
    void ClearAppliedForce();
 
    void AddNeighbour(unsigned index);
 
    void ClearNeighbours();
 
    void RemoveDuplicateNeighbours();
 
    bool NeighboursIsEmpty();
 
    void SetNeighboursSetUp(bool flag);
 
    bool GetNeighboursSetUp();
 
    std::vector<unsigned>& rGetNeighbours();
 
    bool IsParticle();
 
    void SetIsParticle(bool isParticle);
 
    double GetRadius();
 
    void SetRadius(double radius);
};
 
#endif //_NODEATTRIBUTES_HPP_