OnLatticeSimulation.hpp

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*/
 
#ifndef ONLATTICESIMULATION_HPP_
#define ONLATTICESIMULATION_HPP_
 
#include "ChasteSerialization.hpp"
#include <boost/serialization/base_object.hpp>
 
#include "AbstractCellBasedSimulation.hpp"
#include "AbstractUpdateRule.hpp"
 
template<unsigned DIM>
class OnLatticeSimulation : public AbstractCellBasedSimulation<DIM>
{
private:
 
    friend class boost::serialization::access;
    template<class Archive>
    void serialize(Archive & archive, const unsigned int version)
    {
        archive & boost::serialization::base_object<AbstractCellBasedSimulation<DIM> >(*this);
    }
 
protected:
 
    void UpdateCellPopulation();
 
    void UpdateCellLocationsAndTopology();
 
public:
 
    OnLatticeSimulation(AbstractCellPopulation<DIM>& rCellPopulation,
                        bool deleteCellPopulationInDestructor=false,
                        bool initialiseCells=true);
 
    void AddUpdateRule(boost::shared_ptr<AbstractUpdateRule<DIM> > pUpdateRule);
 
    void RemoveAllUpdateRules();
 
    void OutputAdditionalSimulationSetup(out_stream& rParamsFile);
 
    void OutputSimulationParameters(out_stream& rParamsFile);
};
 
// Serialization for Boost >= 1.36
#include "SerializationExportWrapper.hpp"
EXPORT_TEMPLATE_CLASS_SAME_DIMS(OnLatticeSimulation)
 
namespace boost
{
namespace serialization
{
template<class Archive, unsigned DIM>
inline void save_construct_data(
    Archive & ar, const OnLatticeSimulation<DIM> * t, const unsigned int file_version)
{
    // Save data required to construct instance
    const AbstractCellPopulation<DIM>* p_cell_population = &(t->rGetCellPopulation());
    ar & p_cell_population;
}
 
template<class Archive, unsigned DIM>
inline void load_construct_data(
    Archive & ar, OnLatticeSimulation<DIM> * t, const unsigned int file_version)
{
    // Retrieve data from archive required to construct new instance
    AbstractCellPopulation<DIM>* p_cell_population;
    ar >> p_cell_population;
 
    // Invoke inplace constructor to initialise instance, last two variables set extra
    // member variables to be deleted as they are loaded from archive and to not initialise sells.
    ::new(t)OnLatticeSimulation<DIM>(*p_cell_population, true, false);
}
}
} // namespace
 
#endif /*ONLATTICESIMULATION_HPP_*/