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Chaste Commit::333233612e3dcc941d260418acd7b5ccdc30390e
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#include <AbstractCellMutationState.hpp>
Public Member Functions | |
AbstractCellMutationState (unsigned colour) | |
virtual | ~AbstractCellMutationState () |
unsigned | GetColour () const |
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AbstractCellProperty () | |
virtual | ~AbstractCellProperty () |
template<class CLASS > | |
bool | IsType () const |
template<class BASECLASS > | |
bool | IsSubType () const |
bool | IsSame (const AbstractCellProperty *pOther) const |
bool | IsSame (boost::shared_ptr< const AbstractCellProperty > pOther) const |
void | IncrementCellCount () |
void | DecrementCellCount () |
unsigned | GetCellCount () const |
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virtual | ~Identifiable () |
std::string | GetIdentifier () const |
Private Member Functions | |
template<class Archive > | |
void | serialize (Archive &archive, const unsigned int version) |
AbstractCellMutationState () | |
Private Attributes | |
unsigned | mColour |
Friends | |
class | boost::serialization::access |
Base class for cell mutation states.
Each Cell has a (shared pointer to a) mutation state instance, which will be an instance of a subclass of this class. When setting up a CellBasedSimulation, the user must specify a list of AbstractCellMutationState instances, which represent the possible mutations that can occur in the simulation (including WildTypeCellMutationState). This provides a registry of available mutation states, and cells will point to one of these objects.
The mutation state objects keep track of the number of cells in a given mutation state, as well as what colour should be used by the visualizer to display cells in each state.
Definition at line 58 of file AbstractCellMutationState.hpp.
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private |
Default constructor needs to be defined for archiving, but never actually used, since subclasses call the normal constructor.
Definition at line 40 of file AbstractCellMutationState.cpp.
References NEVER_REACHED.
AbstractCellMutationState::AbstractCellMutationState | ( | unsigned | colour | ) |
Constructor.
colour | what colour cells with this mutation state should be in the visualizer |
Definition at line 47 of file AbstractCellMutationState.cpp.
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virtual |
Virtual destructor, to make this class polymorphic.
Definition at line 53 of file AbstractCellMutationState.cpp.
unsigned AbstractCellMutationState::GetColour | ( | ) | const |
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inlineprivate |
Archive the member variables.
archive | the archive |
version | the current version of this class |
Definition at line 76 of file AbstractCellMutationState.hpp.
References mColour.
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friend |
Needed for serialization.
Definition at line 68 of file AbstractCellMutationState.hpp.
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private |
Colour for use by visualizer.
Definition at line 65 of file AbstractCellMutationState.hpp.
Referenced by GetColour(), and serialize().