![]() |
Chaste Commit::675f9facbe008c5eacb9006feaeb6423206579ea
|
#include <AbstractCellMutationState.hpp>
Inheritance diagram for AbstractCellMutationState:
Collaboration diagram for AbstractCellMutationState:Public Member Functions | |
| AbstractCellMutationState (unsigned colour) | |
| virtual | ~AbstractCellMutationState () |
| unsigned | GetColour () const |
Public Member Functions inherited from AbstractCellProperty | |
| AbstractCellProperty () | |
| virtual | ~AbstractCellProperty () |
| template<class CLASS > | |
| bool | IsType () const |
| template<class BASECLASS > | |
| bool | IsSubType () const |
| bool | IsSame (const AbstractCellProperty *pOther) const |
| bool | IsSame (boost::shared_ptr< const AbstractCellProperty > pOther) const |
| void | IncrementCellCount () |
| void | DecrementCellCount () |
| unsigned | GetCellCount () const |
Public Member Functions inherited from Identifiable | |
| virtual | ~Identifiable () |
| std::string | GetIdentifier () const |
Private Member Functions | |
| template<class Archive > | |
| void | serialize (Archive &archive, const unsigned int version) |
| AbstractCellMutationState () | |
Private Attributes | |
| unsigned | mColour |
Friends | |
| class | boost::serialization::access |
Base class for cell mutation states.
Each Cell has a (shared pointer to a) mutation state instance, which will be an instance of a subclass of this class. When setting up a CellBasedSimulation, the user must specify a list of AbstractCellMutationState instances, which represent the possible mutations that can occur in the simulation (including WildTypeCellMutationState). This provides a registry of available mutation states, and cells will point to one of these objects.
The mutation state objects keep track of the number of cells in a given mutation state, as well as what colour should be used by the visualizer to display cells in each state.
Definition at line 58 of file AbstractCellMutationState.hpp.
|
private |
Default constructor needs to be defined for archiving, but never actually used, since subclasses call the normal constructor.
Definition at line 40 of file AbstractCellMutationState.cpp.
References NEVER_REACHED.
| AbstractCellMutationState::AbstractCellMutationState | ( | unsigned | colour | ) |
Constructor.
| colour | what colour cells with this mutation state should be in the visualizer |
Definition at line 47 of file AbstractCellMutationState.cpp.
|
virtual |
Virtual destructor, to make this class polymorphic.
Definition at line 53 of file AbstractCellMutationState.cpp.
| unsigned AbstractCellMutationState::GetColour | ( | ) | const |
|
inlineprivate |
Archive the member variables.
| archive | the archive |
| version | the current version of this class |
Definition at line 76 of file AbstractCellMutationState.hpp.
References mColour.
|
friend |
Needed for serialization.
Definition at line 68 of file AbstractCellMutationState.hpp.
|
private |
Colour for use by visualizer.
Definition at line 65 of file AbstractCellMutationState.hpp.
Referenced by GetColour(), and serialize().