#include <AbstractConductivityModifier.hpp>

Inheritance diagram for AbstractConductivityModifier< ELEMENT_DIM, SPACE_DIM >:

Collaboration diagram for AbstractConductivityModifier< ELEMENT_DIM, SPACE_DIM >:

Public Member Functions
virtual	~AbstractConductivityModifier ()

c_matrix< double, SPACE_DIM, SPACE_DIM > &	rGetModifiedConductivityTensor (unsigned elementIndex, const c_matrix< double, SPACE_DIM, SPACE_DIM > &rOriginalConductivity, unsigned domainIndex)

virtual c_matrix< double, SPACE_DIM, SPACE_DIM > &	rCalculateModifiedConductivityTensor (unsigned elementIndex, const c_matrix< double, SPACE_DIM, SPACE_DIM > &rOriginalConductivity, unsigned domainIndex)=0

Private Attributes
std::vector< std::pair< unsigned, c_matrix< double, SPACE_DIM, SPACE_DIM > > >	mCache

Detailed Description

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
class AbstractConductivityModifier< ELEMENT_DIM, SPACE_DIM >

Abstract class which just defines an interface and caching method. The pure method rCalculateModifiedConductivityTensor() should take in a conductivity and return a modified conductivity (with some dependence e.g. on tissue deformation in cardiac electromechanics).

Definition at line 47 of file AbstractConductivityModifier.hpp.

Constructor & Destructor Documentation

◆ ~AbstractConductivityModifier()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

virtual AbstractConductivityModifier< ELEMENT_DIM, SPACE_DIM >::~AbstractConductivityModifier ( )

inlinevirtual

Destructor

Definition at line 55 of file AbstractConductivityModifier.hpp.

Member Function Documentation

◆ rCalculateModifiedConductivityTensor()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

virtual c_matrix< double, SPACE_DIM, SPACE_DIM > & AbstractConductivityModifier< ELEMENT_DIM, SPACE_DIM >::rCalculateModifiedConductivityTensor	(	unsigned	elementIndex,
		const c_matrix< double, SPACE_DIM, SPACE_DIM > &	rOriginalConductivity,
		unsigned	domainIndex
	)

pure virtual

Pure method that alters the given conductivity tensor on an element-wise basis for a particular domain.

Parameters

elementIndex	Global index of current element.
rOriginalConductivity	Reference to the original (for example, undeformed) conductivity tensor.
domainIndex	The index of the domain (0=intracellular, 1=extracellular, [2=second intracellular in extended bidomain]).

Returns: Reference to a modified conductivity tensor, N.B. the fact this is a reference means the tensor object has to persist, and should therefore generally be a member variable of your subclass (it gets copied/cached appropriately by the calling code, so doesn't have to persist for subsequent calls!).

Referenced by AbstractConductivityModifier< ELEMENT_DIM, SPACE_DIM >::rGetModifiedConductivityTensor().

◆ rGetModifiedConductivityTensor()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

c_matrix< double, SPACE_DIM, SPACE_DIM > & AbstractConductivityModifier< ELEMENT_DIM, SPACE_DIM >::rGetModifiedConductivityTensor	(	unsigned	elementIndex,
		const c_matrix< double, SPACE_DIM, SPACE_DIM > &	rOriginalConductivity,
		unsigned	domainIndex
	)

inline

Method that checks element index and the domain (intra/extra/other) and returns cached value if available.

Parameters

elementIndex	Index of current element
rOriginalConductivity	Reference to the original (for example, undeformed) conductivity tensor
domainIndex	Used to tailor modification to the domain. 0 = intracellular, 1 = extracellular, 2 = second intracellular (tridomain)