Chaste Commit::baa90ac2819b962188b7562f2326be23c47859a7
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#include <ChemotacticForce.hpp>
Public Member Functions | |
ChemotacticForce () | |
~ChemotacticForce () | |
void | AddForceContribution (AbstractCellPopulation< DIM > &rCellPopulation) |
void | OutputForceParameters (out_stream &rParamsFile) |
Public Member Functions inherited from AbstractForce< DIM > | |
AbstractForce () | |
virtual | ~AbstractForce () |
virtual void | AddForceContribution (AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM > &rCellPopulation)=0 |
void | OutputForceInfo (out_stream &rParamsFile) |
virtual void | WriteDataToVisualizerSetupFile (out_stream &pVizSetupFile) |
Public Member Functions inherited from Identifiable | |
virtual | ~Identifiable () |
std::string | GetIdentifier () const |
Private Member Functions | |
double | GetChemotacticForceMagnitude (const double concentration, const double concentrationGradientMagnitude) |
template<class Archive > | |
void | serialize (Archive &archive, const unsigned int version) |
Friends | |
class | TestForces |
class | boost::serialization::access |
A chemotactic force class.
Definition at line 48 of file ChemotacticForce.hpp.
ChemotacticForce< DIM >::ChemotacticForce | ( | ) |
Constructor.
Definition at line 42 of file ChemotacticForce.cpp.
ChemotacticForce< DIM >::~ChemotacticForce | ( | ) |
Destructor.
Definition at line 48 of file ChemotacticForce.cpp.
void ChemotacticForce< DIM >::AddForceContribution | ( | AbstractCellPopulation< DIM > & | rCellPopulation | ) |
Overridden AddForceContribution() method.
rCellPopulation | reference to the cell population |
Fc = chi(C,|gradC|) gradC/|gradC| (if |gradC|>0, else Fc = 0)
Definition at line 60 of file ChemotacticForce.cpp.
References AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::Begin(), AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::End(), AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::GetLocationIndexUsingCell(), AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::GetNode(), CellwiseDataGradient< DIM >::rGetGradient(), and CellwiseDataGradient< DIM >::SetupGradients().
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private |
concentration | the local nutrient concentration |
concentrationGradientMagnitude | the magnitude of the local nutrient concentration gradient |
Definition at line 53 of file ChemotacticForce.cpp.
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virtual |
Overridden OutputForceParameters() method.
rParamsFile | the file stream to which the parameters are output |
Implements AbstractForce< DIM >.
Definition at line 92 of file ChemotacticForce.cpp.
References AbstractForce< ELEMENT_DIM, SPACE_DIM >::OutputForceParameters().
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inlineprivate |
Boost Serialization method for archiving/checkpointing. Archives the object and its member variables.
archive | The boost archive. |
version | The current version of this class. |
Definition at line 71 of file ChemotacticForce.hpp.
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friend |
Definition at line 62 of file ChemotacticForce.hpp.
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friend |
Definition at line 50 of file ChemotacticForce.hpp.