Chaste Commit::baa90ac2819b962188b7562f2326be23c47859a7
CorriasBuistICCModified Member List

This is the complete list of members for CorriasBuistICCModified, including all inherited members.

AbstractCardiacCell(boost::shared_ptr< AbstractIvpOdeSolver > pOdeSolver, unsigned numberOfStateVariables, unsigned voltageIndex, boost::shared_ptr< AbstractStimulusFunction > pIntracellularStimulus)AbstractCardiacCell
AbstractCardiacCellInterface(boost::shared_ptr< AbstractIvpOdeSolver > pOdeSolver, unsigned voltageIndex, boost::shared_ptr< AbstractStimulusFunction > pIntracellularStimulus)AbstractCardiacCellInterface
AbstractOdeSystem(unsigned numberOfStateVariables)AbstractOdeSystem
AbstractParameterisedSystem(unsigned numberOfStateVariables)AbstractParameterisedSystem< std::vector< double > >
AbstractUntemplatedParameterisedSystem(unsigned numberOfStateVariables)AbstractUntemplatedParameterisedSystem
AdjustOutOfRangeSlowValues(std::vector< double > &rSlowValues)AbstractCardiacCellvirtual
AsurfCorriasBuistICCModifiedprivate
Asurf_in_cm_squareCorriasBuistICCModifiedprivate
bCorriasBuistICCModifiedprivate
boost::serialization::access (defined in CorriasBuistICCModified)CorriasBuistICCModifiedfriend
Ca_oCorriasBuistICCModifiedprivate
CalculateRootFunction(double time, const std::vector< double > &rY)AbstractOdeSystemvirtual
CalculateStoppingEvent(double time, const std::vector< double > &rY)AbstractOdeSystemvirtual
CheckForArchiveFix()AbstractCardiacCellprivate
CheckParametersOnLoad(const std::vector< double > &rParameters, const std::vector< std::string > &rParameterNames)AbstractParameterisedSystem< std::vector< double > >protected
Cl_iCorriasBuistICCModifiedprivate
Cl_oCorriasBuistICCModifiedprivate
CmCorriasBuistICCModifiedprivate
Compute(double tStart, double tEnd, double tSamp=0.0)AbstractCardiacCellvirtual
ComputeDerivedQuantities(double time, const std::vector< double > &rState)AbstractParameterisedSystem< std::vector< double > >virtual
ComputeDerivedQuantitiesFromCurrentState(double time)AbstractParameterisedSystem< std::vector< double > >
ComputeExceptVoltage(double tStart, double tEnd)AbstractCardiacCellvirtual
concCorriasBuistICCModifiedprivate
CorriasBuistICCModified(boost::shared_ptr< AbstractIvpOdeSolver > pSolver, boost::shared_ptr< AbstractStimulusFunction > pIntracellularStimulus)CorriasBuistICCModified
d_ACTCorriasBuistICCModifiedprivate
d_INHCorriasBuistICCModifiedprivate
d_IP3CorriasBuistICCModifiedprivate
deltaPsiCorriasBuistICCModifiedprivate
deltaPsi_BCorriasBuistICCModifiedprivate
deltaPsi_starCorriasBuistICCModifiedprivate
DumpState(const std::string &rMessage)AbstractParameterisedSystem< std::vector< double > >protected
DumpState(const std::string &rMessage, std::vector< double > Y)AbstractParameterisedSystem< std::vector< double > >protected
DumpState(const std::string &rMessage, std::vector< double > Y, double time)AbstractParameterisedSystem< std::vector< double > >protected
e2FoRTdPsiMdPsiSCorriasBuistICCModifiedprivate
E_ClCorriasBuistICCModifiedprivate
E_KCorriasBuistICCModifiedprivate
E_NaCorriasBuistICCModifiedprivate
E_NSCCCorriasBuistICCModifiedprivate
ebFoRTdPsiMdPsiSCorriasBuistICCModifiedprivate
EvaluateYDerivatives(double time, const std::vector< double > &rY, std::vector< double > &rDY)CorriasBuistICCModifiedvirtual
FCorriasBuistICCModifiedprivate
fcCorriasBuistICCModifiedprivate
feCorriasBuistICCModifiedprivate
fmCorriasBuistICCModifiedprivate
FoRTCorriasBuistICCModifiedprivate
G_max_bkCorriasBuistICCModifiedprivate
G_max_BKCorriasBuistICCModifiedprivate
G_max_CaClCorriasBuistICCModifiedprivate
G_max_ERGCorriasBuistICCModifiedprivate
G_max_kv11CorriasBuistICCModifiedprivate
G_max_LtypeCorriasBuistICCModifiedprivate
G_max_NaCorriasBuistICCModifiedprivate
G_max_NSCCCorriasBuistICCModifiedprivate
G_max_VDDRCorriasBuistICCModifiedprivate
GetAnyVariable(const std::string &rName, double time=0.0)AbstractCardiacCellvirtual
AbstractOdeSystem::GetAnyVariable(unsigned index, double time=0.0, std::vector< double > *pDerivedQuantities=NULL)AbstractParameterisedSystem< std::vector< double > >
AbstractOdeSystem::GetAnyVariable(const std::string &rName, double time=0.0, std::vector< double > *pDerivedQuantities=NULL)AbstractParameterisedSystem< std::vector< double > >
GetAnyVariableIndex(const std::string &rName) constAbstractUntemplatedParameterisedSystem
GetAnyVariableUnits(unsigned index) constAbstractUntemplatedParameterisedSystem
GetAnyVariableUnits(const std::string &rName) constAbstractUntemplatedParameterisedSystem
GetAttribute(const std::string &rName) constAbstractUntemplatedParameterisedSystem
GetCarbonMonoxideScaleFactor()CorriasBuistICCModified
GetDerivedQuantityIndex(const std::string &rName) constAbstractUntemplatedParameterisedSystem
GetDerivedQuantityUnits(unsigned index) constAbstractUntemplatedParameterisedSystem
GetIIonic(const std::vector< double > *pStateVariables=NULL)CorriasBuistICCModifiedvirtual
GetInitialConditions() constAbstractParameterisedSystem< std::vector< double > >
GetIntracellularAreaStimulus(double time)AbstractCardiacCellInterface
GetIntracellularCalciumConcentration()AbstractCardiacCellInterfacevirtual
GetIntracellularStimulus(double time)AbstractCardiacCellInterface
GetLookupTableCollection()AbstractCardiacCellInterfaceinlinevirtual
GetNumberOfAttributes() constAbstractUntemplatedParameterisedSystem
GetNumberOfDerivedQuantities() constAbstractUntemplatedParameterisedSystem
GetNumberOfParameters() constAbstractCardiacCellvirtual
GetNumberOfStateVariables() constAbstractCardiacCellvirtual
GetNumSlowValues()AbstractCardiacCellvirtual
GetParameter(const std::string &rParameterName)AbstractCardiacCellvirtual
GetParameter(unsigned parameterIndex)AbstractCardiacCellvirtual
AbstractOdeSystem::GetParameter(unsigned index) constAbstractParameterisedSystem< std::vector< double > >
AbstractOdeSystem::GetParameter(const std::string &rName) constAbstractParameterisedSystem< std::vector< double > >
GetParameterIndex(const std::string &rName) constAbstractUntemplatedParameterisedSystem
GetParameterUnits(unsigned index) constAbstractUntemplatedParameterisedSystem
GetSlowValues(std::vector< double > &rSlowValues)AbstractCardiacCellvirtual
GetSolver() constAbstractCardiacCellInterface
GetStateMessage(const std::string &rMessage, std::vector< double > Y)AbstractParameterisedSystem< std::vector< double > >private
GetStateVariable(unsigned index) constAbstractParameterisedSystem< std::vector< double > >
GetStateVariable(const std::string &rName) constAbstractParameterisedSystem< std::vector< double > >
GetStateVariableIndex(const std::string &rName) constAbstractUntemplatedParameterisedSystem
GetStateVariables()AbstractParameterisedSystem< std::vector< double > >
GetStateVariableUnits(unsigned index) constAbstractUntemplatedParameterisedSystem
GetStdVecStateVariables()AbstractCardiacCellvirtual
GetStimulus(double time)AbstractCardiacCellInterface
GetStimulusFunction()AbstractCardiacCellInterface
GetStimulusFunction() constAbstractCardiacCellInterface
GetSystemInformation() constAbstractUntemplatedParameterisedSystem
GetSystemName() constAbstractUntemplatedParameterisedSystem
GetUseAnalyticJacobian()AbstractOdeSystem
GetVoltage()AbstractCardiacCellvirtual
GetVoltageIndex()AbstractCardiacCellInterface
HasAnyVariable(const std::string &rName) constAbstractUntemplatedParameterisedSystem
HasAttribute(const std::string &rName) constAbstractUntemplatedParameterisedSystem
HasCellMLDefaultStimulus()AbstractCardiacCellInterface
HasDerivedQuantity(const std::string &rName) constAbstractUntemplatedParameterisedSystem
HasParameter(const std::string &rName) constAbstractUntemplatedParameterisedSystem
HasStateVariable(const std::string &rName) constAbstractUntemplatedParameterisedSystem
Init()AbstractCardiacCell
IsFastOnly()AbstractCardiacCellvirtual
J_ERleakCorriasBuistICCModifiedprivate
J_max_leakCorriasBuistICCModifiedprivate
J_max_PMCACorriasBuistICCModifiedprivate
J_max_PMCA_PUCorriasBuistICCModifiedprivate
Jmax_IP3CorriasBuistICCModifiedprivate
Jmax_NaCaCorriasBuistICCModifiedprivate
Jmax_sercaCorriasBuistICCModifiedprivate
Jmax_uniCorriasBuistICCModifiedprivate
K_actCorriasBuistICCModifiedprivate
K_CaCorriasBuistICCModifiedprivate
K_iCorriasBuistICCModifiedprivate
K_NaCorriasBuistICCModifiedprivate
K_oCorriasBuistICCModifiedprivate
k_sercaCorriasBuistICCModifiedprivate
K_transCorriasBuistICCModifiedprivate
LCorriasBuistICCModifiedprivate
load(Archive &archive, const unsigned int version)AbstractOdeSysteminlineprivate
mDtAbstractCardiacCellprotected
mFixedVoltageAbstractCardiacCellInterfaceprotected
mFractionOfVDDRInPUCorriasBuistICCModifiedprivate
mHasDefaultStimulusFromCellMLAbstractCardiacCellInterfaceprotected
mIP3ConcentrationCorriasBuistICCModifiedprivate
mIsUsedInTissueAbstractCardiacCellInterfaceprotected
mNumberOfStateVariablesAbstractUntemplatedParameterisedSystemprotected
mParametersAbstractParameterisedSystem< std::vector< double > >protected
mpIntracellularStimulusAbstractCardiacCellInterfaceprotected
mpOdeSolverAbstractCardiacCellInterfaceprotected
mpSystemInfoAbstractUntemplatedParameterisedSystemprotected
mScaleFactorCarbonMonoxideCorriasBuistICCModifiedprivate
mScaleFactorSercaCorriasBuistICCModifiedprivate
mSetVoltageDerivativeToZeroAbstractCardiacCellInterfaceprotected
mStateVariablesAbstractParameterisedSystem< std::vector< double > >protected
mUseAnalyticJacobianAbstractOdeSystemprotected
mVoltageIndexAbstractCardiacCellInterfaceprotected
naCorriasBuistICCModifiedprivate
Na_iCorriasBuistICCModifiedprivate
Na_oCorriasBuistICCModifiedprivate
NaPerm_o_KpermCorriasBuistICCModifiedprivate
P_cytoCorriasBuistICCModifiedprivate
P_ERCorriasBuistICCModifiedprivate
P_mitoCorriasBuistICCModifiedprivate
P_PUCorriasBuistICCModifiedprivate
Q10CaCorriasBuistICCModifiedprivate
Q10KCorriasBuistICCModifiedprivate
Q10NaCorriasBuistICCModifiedprivate
RCorriasBuistICCModifiedprivate
ResetToInitialConditions()AbstractParameterisedSystem< std::vector< double > >virtual
rGetConstStateVariables() constAbstractOdeSystem
rGetDerivedQuantityNames() constAbstractUntemplatedParameterisedSystem
rGetDerivedQuantityUnits() constAbstractUntemplatedParameterisedSystem
rGetParameterNames() constAbstractUntemplatedParameterisedSystem
rGetParameterUnits() constAbstractUntemplatedParameterisedSystem
rGetStateVariableNames() constAbstractCardiacCellvirtual
rGetStateVariables()AbstractParameterisedSystem< std::vector< double > >
rGetStateVariableUnits() constAbstractUntemplatedParameterisedSystem
RToFCorriasBuistICCModifiedprivate
save(Archive &archive, const unsigned int version) constAbstractOdeSysteminlineprivate
serialize(Archive &archive, const unsigned int version)CorriasBuistICCModifiedinlineprivate
SetAnyVariable(unsigned index, double value)AbstractParameterisedSystem< std::vector< double > >
SetAnyVariable(const std::string &rName, double value)AbstractParameterisedSystem< std::vector< double > >
SetCarbonMonoxideScaleFactor(double scaleFactor)CorriasBuistICCModified
SetDefaultInitialCondition(unsigned index, double initialCondition)AbstractParameterisedSystem< std::vector< double > >
SetDefaultInitialConditions(const std::vector< double > &rInitialConditions)AbstractParameterisedSystem< std::vector< double > >
SetFixedVoltage(double voltage)AbstractCardiacCellInterface
SetFractionOfVDDRInPU(double fraction)CorriasBuistICCModified
SetIntracellularStimulusFunction(boost::shared_ptr< AbstractStimulusFunction > pStimulus)AbstractCardiacCellInterface
SetIP3Concentration(double concentration)CorriasBuistICCModified
SetParameter(const std::string &rParameterName, double value)AbstractCardiacCellvirtual
AbstractOdeSystem::SetParameter(unsigned index, double value)AbstractParameterisedSystem< std::vector< double > >
SetSercaPumpScaleFactor(double scaleFactor)CorriasBuistICCModified
SetSlowValues(const std::vector< double > &rSlowValues)AbstractCardiacCellvirtual
SetSolver(boost::shared_ptr< AbstractIvpOdeSolver > pSolver)AbstractCardiacCellInterface
SetState(CellModelState state)AbstractCardiacCellvirtual
SetStateVariable(unsigned index, double newValue)AbstractCardiacCellvirtual
SetStateVariable(const std::string &rName, double newValue)AbstractCardiacCellvirtual
SetStateVariables(const std::vector< double > &rVariables)AbstractCardiacCellvirtual
AbstractOdeSystem::SetStateVariables(const std::vector< double > &rStateVariables)AbstractParameterisedSystem< std::vector< double > >
SetStimulusFunction(boost::shared_ptr< AbstractStimulusFunction > pStimulus)AbstractCardiacCellInterface
SetStretch(double stretch)AbstractCardiacCellInterfaceinlinevirtual
SetTimestep(double dt)AbstractCardiacCellvirtual
SetUsedInTissueSimulation(bool tissue=true)AbstractCardiacCellInterface
SetVoltage(double voltage)AbstractCardiacCellvirtual
SetVoltageDerivativeToZero(bool clamp=true)AbstractCardiacCellInterfacevirtual
SolveAndUpdateState(double tStart, double tEnd)AbstractCardiacCellvirtual
TCorriasBuistICCModifiedprivate
T_correction_BKCorriasBuistICCModifiedprivate
T_correction_CaCorriasBuistICCModifiedprivate
T_correction_KCorriasBuistICCModifiedprivate
T_correction_NaCorriasBuistICCModifiedprivate
T_expCorriasBuistICCModifiedprivate
tau_d_CaClCorriasBuistICCModifiedprivate
tau_d_ERGCorriasBuistICCModifiedprivate
tau_d_kv11CorriasBuistICCModifiedprivate
tau_d_LtypeCorriasBuistICCModifiedprivate
tau_d_NaCorriasBuistICCModifiedprivate
tau_d_NSCCCorriasBuistICCModifiedprivate
tau_d_VDDRCorriasBuistICCModifiedprivate
tau_f_ca_LtypeCorriasBuistICCModifiedprivate
tau_f_kv11CorriasBuistICCModifiedprivate
tau_f_LtypeCorriasBuistICCModifiedprivate
tau_f_NaCorriasBuistICCModifiedprivate
tau_f_VDDRCorriasBuistICCModifiedprivate
tauhCorriasBuistICCModifiedprivate
UseCellMLDefaultStimulus()AbstractCardiacCellInterfacevirtual
V_cytoCorriasBuistICCModifiedprivate
V_ERCorriasBuistICCModifiedprivate
V_MITOCorriasBuistICCModifiedprivate
V_PUCorriasBuistICCModifiedprivate
VerifyStateVariables()CorriasBuistICCModifiedvirtual
VolCorriasBuistICCModifiedprivate
~AbstractCardiacCell()AbstractCardiacCellvirtual
~AbstractCardiacCellInterface()AbstractCardiacCellInterfacevirtual
~AbstractOdeSystem()AbstractOdeSystemvirtual
~AbstractUntemplatedParameterisedSystem()AbstractUntemplatedParameterisedSystemvirtual
~CorriasBuistICCModified()CorriasBuistICCModified