Chaste Commit::1fd4e48e3990e67db148bc1bc4cf6991a0049d0c
NaturalNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > Class Template Reference

#include <NaturalNeumannSurfaceTermAssembler.hpp>

+ Inheritance diagram for NaturalNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >:
+ Collaboration diagram for NaturalNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >:

Public Member Functions

 NaturalNeumannSurfaceTermAssembler (AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh, BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > *pBoundaryConditions)
 
void SetScaleFactor (double scaleFactor)
 
- Public Member Functions inherited from AbstractFeSurfaceIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
 AbstractFeSurfaceIntegralAssembler (AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh, BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > *pBoundaryConditions)
 
virtual ~AbstractFeSurfaceIntegralAssembler ()
 
void ResetBoundaryConditionsContainer (BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > *pBoundaryConditions)
 
- Public Member Functions inherited from AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, true, false, NORMAL >
 AbstractFeAssemblerCommon ()
 
void SetCurrentSolution (Vec currentSolution)
 
virtual ~AbstractFeAssemblerCommon ()
 
- Public Member Functions inherited from AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX >
 AbstractFeAssemblerInterface ()
 
void SetMatrixToAssemble (Mat &rMatToAssemble, bool zeroMatrixBeforeAssembly=true)
 
void SetVectorToAssemble (Vec &rVecToAssemble, bool zeroVectorBeforeAssembly)
 
void Assemble ()
 
void AssembleMatrix ()
 
void AssembleVector ()
 
virtual ~AbstractFeAssemblerInterface ()
 

Protected Member Functions

virtual c_vector< double, PROBLEM_DIM *ELEMENT_DIM > ComputeVectorSurfaceTerm (const BoundaryElement< ELEMENT_DIM-1, SPACE_DIM > &rSurfaceElement, c_vector< double, ELEMENT_DIM > &rPhi, ChastePoint< SPACE_DIM > &rX)
 
- Protected Member Functions inherited from AbstractFeSurfaceIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
virtual void AssembleOnSurfaceElement (const BoundaryElement< ELEMENT_DIM-1, SPACE_DIM > &rSurfaceElement, c_vector< double, PROBLEM_DIM *ELEMENT_DIM > &rBSurfElem)
 
void DoAssemble ()
 
- Protected Member Functions inherited from AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, true, false, NORMAL >
virtual double GetCurrentSolutionOrGuessValue (unsigned nodeIndex, unsigned indexOfUnknown)
 
virtual void ResetInterpolatedQuantities ()
 
virtual void IncrementInterpolatedQuantities (double phiI, const Node< SPACE_DIM > *pNode)
 
virtual void IncrementInterpolatedGradientQuantities (const c_matrix< double, SPACE_DIM, ELEMENT_DIM+1 > &rGradPhi, unsigned phiIndex, const Node< SPACE_DIM > *pNode)
 

Protected Attributes

double mScaleFactor
 
- Protected Attributes inherited from AbstractFeSurfaceIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > * mpMesh
 
BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > * mpBoundaryConditions
 
GaussianQuadratureRule< ELEMENT_DIM-1 > * mpSurfaceQuadRule
 
- Protected Attributes inherited from AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, true, false, NORMAL >
ReplicatableVector mCurrentSolutionOrGuessReplicated
 
- Protected Attributes inherited from AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX >
Vec mVectorToAssemble
 
Mat mMatrixToAssemble
 
bool mAssembleMatrix
 
bool mAssembleVector
 
bool mZeroMatrixBeforeAssembly
 
bool mZeroVectorBeforeAssembly
 
PetscInt mOwnershipRangeLo
 
PetscInt mOwnershipRangeHi
 

Additional Inherited Members

- Protected Types inherited from AbstractFeSurfaceIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
typedef LinearBasisFunction< ELEMENT_DIM-1 > SurfaceBasisFunction
 

Detailed Description

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM, unsigned PROBLEM_DIM>
class NaturalNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >

An assembler for assembling surface element contributions to a vector coming from Neumann boundary conditions, assuming the prescribed BCs are NATURAL boundary conditions.

Examples of natural BCs: u_t = u_{xx} +f —> natural BCs are specification of (u_x . n) = g u_t = Laplacian(u) +f —> natural BCs are specification of (grad(u) . n) = g u_t = Div (D grad(u)) —> natural BCs are specification of ( (D grad(u)) . n) = g 0 = Div (D grad(u)) —> natural BCs are specification of ( (D grad(u)) . n) = g 0 = Div (D1 grad(u1)) + Div (D2 grad(u2)) (one equation of a 2-unknown problem) —> natural BCs are specification of ( (D1 grad(u1)) . n + (D2 grad(u2)) . n) = g1

In all cases, when in weak form, the surface integral is integral(gv dS), where v is the test function (or integral_over_Gamma(g1*v1+g2*v2 dS) in the 2-unknown case).

The contribution of the finite element vector is therefore always: the STRIPED version of the following BLOCK vector: [c1 c2 .. cP], where P = PROBLEM_DIM, each c_i is of dimension N (number of nodes/bases), and c1 has entries `integral_over_Gamma (g1*phi_i dS)`, etc.

Definition at line 62 of file NaturalNeumannSurfaceTermAssembler.hpp.

Constructor & Destructor Documentation

◆ NaturalNeumannSurfaceTermAssembler()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM, unsigned PROBLEM_DIM>
NaturalNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >::NaturalNeumannSurfaceTermAssembler ( AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *  pMesh,
BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > *  pBoundaryConditions 
)
inline

Constructor

Parameters
pMeshThe mesh
pBoundaryConditionsThe boundary conditions container

Definition at line 95 of file NaturalNeumannSurfaceTermAssembler.hpp.

Member Function Documentation

◆ ComputeVectorSurfaceTerm()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM, unsigned PROBLEM_DIM>
c_vector< double, PROBLEM_DIM *ELEMENT_DIM > NaturalNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >::ComputeVectorSurfaceTerm ( const BoundaryElement< ELEMENT_DIM-1, SPACE_DIM > &  rSurfaceElement,
c_vector< double, ELEMENT_DIM > &  rPhi,
ChastePoint< SPACE_DIM > &  rX 
)
protectedvirtual
Returns
the vector to be added to full vector for a given Gauss point in BoundaryElement, ie, essentially the INTEGRAND in the boundary integral part of the definition of the vector. The arguments are the bases, x and current solution computed at the Gauss point.

Returns the integrand corresponding to natural Neumann BCs being specified.

Parameters
rSurfaceElementthe element which is being considered.
rPhiThe basis functions, rPhi(i) = phi_i, i=1..numBases
rXThe point in space

Reimplemented from AbstractFeSurfaceIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >.

Definition at line 113 of file NaturalNeumannSurfaceTermAssembler.hpp.

◆ SetScaleFactor()

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM, unsigned PROBLEM_DIM>
void NaturalNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >::SetScaleFactor ( double  scaleFactor)
inline

Set a scale factor to multiply the contribution to the vector that is assembled by this class

Parameters
scaleFactor

Definition at line 106 of file NaturalNeumannSurfaceTermAssembler.hpp.

References NaturalNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >::mScaleFactor.

Member Data Documentation

◆ mScaleFactor

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM, unsigned PROBLEM_DIM>
double NaturalNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >::mScaleFactor
protected

The documentation for this class was generated from the following file: