Chaste Commit::ca8ccdedf819b6e02855bc0e8e6f50bdecbc5208
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#include <T2SwapCellKiller.hpp>
Public Member Functions | |
T2SwapCellKiller (AbstractCellPopulation< DIM > *pCellPopulation) | |
void | CheckAndLabelCellsForApoptosisOrDeath () |
void | OutputCellKillerParameters (out_stream &rParamsFile) |
Public Member Functions inherited from AbstractCellKiller< DIM > | |
AbstractCellKiller (AbstractCellPopulation< SPACE_DIM > *pCellPopulation) | |
virtual | ~AbstractCellKiller () |
const AbstractCellPopulation< SPACE_DIM > * | GetCellPopulation () const |
void | OutputCellKillerInfo (out_stream &rParamsFile) |
Public Member Functions inherited from Identifiable | |
virtual | ~Identifiable () |
std::string | GetIdentifier () const |
Private Member Functions | |
template<class Archive > | |
void | serialize (Archive &archive, const unsigned int version) |
Friends | |
class | TestT2SwapCellKiller |
class | boost::serialization::access |
Additional Inherited Members | |
Protected Attributes inherited from AbstractCellKiller< DIM > | |
AbstractCellPopulation< SPACE_DIM > * | mpCellPopulation |
This killer performs T2Swaps and kills the corresponding cells. In contrast to other cell killers it carries out vertex rearrangements. The killer is automatically added to OffLatticeSimulations that use a VertexBasedCellPopulation. To inhibit T2 swaps from happening in a simulation the user needs to set the threshold for T2 swaps in the MutableVertexMesh to 0, using the method SetT2Threshold().
Definition at line 54 of file T2SwapCellKiller.hpp.
T2SwapCellKiller< DIM >::T2SwapCellKiller | ( | AbstractCellPopulation< DIM > * | pCellPopulation | ) |
Default constructor.
pCellPopulation | pointer to the cell population |
Definition at line 40 of file T2SwapCellKiller.cpp.
References EXCEPTION, and AbstractCellKiller< DIM >::mpCellPopulation.
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virtual |
Overridden CheckAndLabelCellsForApoptosisOrDeath() method.
Loop over cells and kill them if they are ready for a T2 swap.
Implements AbstractCellKiller< DIM >.
Definition at line 51 of file T2SwapCellKiller.cpp.
References SimulationTime::GetTime(), and SimulationTime::Instance().
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virtual |
Overridden OutputCellKillerParameters() method.
rParamsFile | the file stream to which the parameters are output |
Implements AbstractCellKiller< DIM >.
Definition at line 113 of file T2SwapCellKiller.cpp.
References AbstractCellKiller< SPACE_DIM >::OutputCellKillerParameters().
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inlineprivate |
Archive the object.
archive | the archive |
version | the current version of this class |
Definition at line 70 of file T2SwapCellKiller.hpp.
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friend |
Needed for serialization.
Definition at line 62 of file T2SwapCellKiller.hpp.
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friend |
Definition at line 57 of file T2SwapCellKiller.hpp.