BackwardEulerFoxModel2002Modified Class Reference

#include <BackwardEulerFoxModel2002Modified.hpp>

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List of all members.

Public Member Functions

 BackwardEulerFoxModel2002Modified (boost::shared_ptr< AbstractStimulusFunction > pIntracellularStimulus)
 BackwardEulerFoxModel2002Modified (boost::shared_ptr< AbstractIvpOdeSolver >, boost::shared_ptr< AbstractStimulusFunction > pIntracellularStimulus)
double GetIIonic ()
void ComputeResidual (const double rCurrentGuess[3], double rResidual[3])
void ComputeJacobian (const double rCurrentGuess[3], double rJacobian[3][3])

Protected Member Functions

void UpdateTransmembranePotential (double var_environment__time)
void ComputeOneStepExceptVoltage (double var_environment__time)

Private Member Functions

template<class Archive>
void serialize (Archive &archive, const unsigned int version)

Friends

class boost::serialization::access


Detailed Description

Generated from CellML, and P_Ca parameter modified.

Definition at line 31 of file BackwardEulerFoxModel2002Modified.hpp.


Constructor & Destructor Documentation

BackwardEulerFoxModel2002Modified::BackwardEulerFoxModel2002Modified ( boost::shared_ptr< AbstractIvpOdeSolver ,
boost::shared_ptr< AbstractStimulusFunction pIntracellularStimulus 
) [inline]

Alternative constructor with the same signature as forwards Euler models.

Definition at line 60 of file BackwardEulerFoxModel2002Modified.hpp.

References AbstractCardiacCell::Init(), OdeSystemInformation< ODE_SYSTEM >::Instance(), and AbstractOdeSystem::mpSystemInfo.


Member Function Documentation

template<class Archive>
void BackwardEulerFoxModel2002Modified::serialize ( Archive &  archive,
const unsigned int  version 
) [inline, private]

Archive the member variables.

Parameters:
archive 
version 

Reimplemented from AbstractBackwardEulerCardiacCell< 3 >.

Definition at line 43 of file BackwardEulerFoxModel2002Modified.hpp.

double BackwardEulerFoxModel2002Modified::GetIIonic (  )  [inline, virtual]

Computes the total current flowing through the cell membrane, using the current values of the state variables.

Implements AbstractCardiacCell.

Definition at line 74 of file BackwardEulerFoxModel2002Modified.hpp.

References AbstractOdeSystem::rGetStateVariables().

void BackwardEulerFoxModel2002Modified::UpdateTransmembranePotential ( double  time  )  [inline, protected, virtual]

Perform a forward Euler step to update the transmembrane potential.

Note:
This method must be provided by subclasses.
Parameters:
time start of this timestep

Implements AbstractBackwardEulerCardiacCell< 3 >.

Definition at line 409 of file BackwardEulerFoxModel2002Modified.hpp.

References AbstractCardiacCell::GetStimulus(), AbstractCardiacCell::mDt, and AbstractOdeSystem::rGetStateVariables().

void BackwardEulerFoxModel2002Modified::ComputeOneStepExceptVoltage ( double  tStart  )  [inline, protected, virtual]

Compute the values of all state variables except the voltage, for one timestep from tStart.

Note:
This method must be provided by subclasses.
Parameters:
tStart start of this timestep

Implements AbstractBackwardEulerCardiacCell< 3 >.

Definition at line 592 of file BackwardEulerFoxModel2002Modified.hpp.

References CardiacNewtonSolver< SIZE >::Instance(), AbstractCardiacCell::mDt, AbstractOdeSystem::rGetStateVariables(), and CardiacNewtonSolver< SIZE >::Solve().


Friends And Related Function Documentation

friend class boost::serialization::access [friend]

Needed for serialization.

Reimplemented from AbstractBackwardEulerCardiacCell< 3 >.

Definition at line 35 of file BackwardEulerFoxModel2002Modified.hpp.


The documentation for this class was generated from the following file:

Generated on Tue Aug 4 16:10:50 2009 for Chaste by  doxygen 1.5.5