BidomainRhsMatrixAssembler< DIM > Member List

This is the complete list of members for BidomainRhsMatrixAssembler< DIM >, including all inherited members.

AbstractAssembler()AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > [inline]
AbstractLinearAssembler(unsigned numQuadPoints=2) (defined in AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > >)AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > > [inline]
AbstractStaticAssembler(unsigned numQuadPoints=2)AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > [inline]
ApplyDirichletConditions(Vec, bool applyToMatrix)AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > > [inline, protected, virtual]
ApplyNeummanBoundaryConditions()AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > [inline, protected]
AssembleOnElement(Element< ELEMENT_DIM, SPACE_DIM > &rElement, c_matrix< double, PROBLEM_DIM *(ELEMENT_DIM+1), PROBLEM_DIM *(ELEMENT_DIM+1) > &rAElem, c_vector< double, PROBLEM_DIM *(ELEMENT_DIM+1)> &rBElem, bool assembleVector, bool assembleMatrix)AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > [inline, protected, virtual]
AssembleOnSurfaceElement(const BoundaryElement< ELEMENT_DIM-1, SPACE_DIM > &rSurfaceElement, c_vector< double, PROBLEM_DIM *ELEMENT_DIM > &rBSurfElem)AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > [inline, protected, virtual]
AssembleSystem(bool assembleVector, bool assembleMatrix, Vec currentSolutionOrGuess=NULL, double currentTime=0.0)AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > [inline, protected, virtual]
BasisFunction typedefAbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > [protected]
BidomainRhsMatrixAssembler(AbstractMesh< DIM, DIM > *pMesh)BidomainRhsMatrixAssembler< DIM > [inline]
ComputeMatrixTerm(c_vector< double, DIM+1 > &rPhi, c_matrix< double, DIM, DIM+1 > &rGradPhi, ChastePoint< DIM > &rX, c_vector< double, 2 > &u, c_matrix< double, 2, DIM > &rGradU, Element< DIM, DIM > *pElement)BidomainRhsMatrixAssembler< DIM > [inline, virtual]
AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > >::ComputeMatrixTerm(c_vector< double, ELEMENT_DIM+1 > &rPhi, c_matrix< double, ELEMENT_DIM, ELEMENT_DIM+1 > &rGradPhi, ChastePoint< SPACE_DIM > &rX, c_vector< double, PROBLEM_DIM > &u, c_matrix< double, PROBLEM_DIM, SPACE_DIM > &rGradU, Element< ELEMENT_DIM, SPACE_DIM > *pElement)=0AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > [protected, pure virtual]
ComputeVectorSurfaceTerm(const BoundaryElement< DIM-1, DIM > &rSurfaceElement, c_vector< double, DIM > &rPhi, ChastePoint< DIM > &rX)BidomainRhsMatrixAssembler< DIM > [inline, virtual]
AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > >::ComputeVectorSurfaceTerm(const BoundaryElement< ELEMENT_DIM-1, SPACE_DIM > &rSurfaceElement, c_vector< double, ELEMENT_DIM > &rPhi, ChastePoint< SPACE_DIM > &rX)=0AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > [protected, pure virtual]
ComputeVectorTerm(c_vector< double, DIM+1 > &rPhi, c_matrix< double, DIM, DIM+1 > &rGradPhi, ChastePoint< DIM > &rX, c_vector< double, 2 > &u, c_matrix< double, 2, DIM > &rGradU, Element< DIM, DIM > *pElement)BidomainRhsMatrixAssembler< DIM > [inline, virtual]
AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > >::ComputeVectorTerm(c_vector< double, ELEMENT_DIM+1 > &rPhi, c_matrix< double, ELEMENT_DIM, ELEMENT_DIM+1 > &rGradPhi, ChastePoint< SPACE_DIM > &rX, c_vector< double, PROBLEM_DIM > &u, c_matrix< double, PROBLEM_DIM, SPACE_DIM > &rGradU, Element< ELEMENT_DIM, SPACE_DIM > *pElement)=0AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > [protected, pure virtual]
E_DIM (defined in BidomainRhsMatrixAssembler< DIM >)BidomainRhsMatrixAssembler< DIM > [static]
FinaliseAssembleSystem(Vec currentSolutionOrGuess, double currentTime)AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > [inline, protected, virtual]
FinaliseLinearSystem(Vec currentSolutionOrGuess, double currentTime, bool assembleVector, bool assembleMatrix)AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > [inline, protected, virtual]
GetCurrentSolutionOrGuessValue(unsigned nodeIndex, unsigned indexOfUnknown)AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > [inline, protected, virtual]
GetLinearSystem()AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > [inline, protected, virtual]
GetMatrix()BidomainRhsMatrixAssembler< DIM > [inline]
IncrementInterpolatedQuantities(double phi_i, const Node< SPACE_DIM > *pNode)AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > [inline, virtual]
InitialiseForSolve(Vec initialSolution)AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > > [inline, protected, virtual]
mCurrentSolutionOrGuessReplicatedAbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > [protected]
mpBoundaryConditionsAbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > [protected]
mpLinearSystemAbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > [protected]
mpMeshAbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > [protected]
mpQuadRuleAbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > [protected]
mpSurfaceQuadRuleAbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > [protected]
P_DIM (defined in BidomainRhsMatrixAssembler< DIM >)BidomainRhsMatrixAssembler< DIM > [static]
PrepareForAssembleSystem(Vec currentSolutionOrGuess, double currentTime)AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > [inline, protected, virtual]
PrepareForSolve()AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > [inline, protected, virtual]
ProblemIsNonlinear()AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > > [inline, protected, virtual]
ResetInterpolatedQuantities(void)AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > [inline, virtual]
rGetCurrentSolutionOrGuess()AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > [inline, protected, virtual]
S_DIM (defined in BidomainRhsMatrixAssembler< DIM >)BidomainRhsMatrixAssembler< DIM > [static]
SetBoundaryConditionsContainer(BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > *pBoundaryConditions)AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > [inline]
SetMatrixIsConst(bool matrixIsConstant=true)AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > > [inline, protected, virtual]
SetMesh(AbstractMesh< ELEMENT_DIM, SPACE_DIM > *pMesh)AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > [inline]
SetNumberOfQuadraturePointsPerDimension(unsigned numQuadPoints)AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > [inline]
Solve(Vec currentSolutionOrGuess=NULL, double currentTime=0.0)AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > > [inline, virtual]
StaticSolve(Vec currentSolutionOrGuess=NULL, double currentTime=0.0, bool assembleMatrix=true)AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > > [inline, protected, virtual]
SurfaceBasisFunction typedefAbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > [protected]
~AbstractAssembler()AbstractAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > [inline, virtual]
~AbstractLinearAssembler()AbstractLinearAssembler< DIM, DIM, 2, false, BidomainRhsMatrixAssembler< DIM > > [inline]
~AbstractStaticAssembler()AbstractStaticAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, NON_HEART, BidomainRhsMatrixAssembler< DIM > > [inline, virtual]
~BidomainRhsMatrixAssembler() (defined in BidomainRhsMatrixAssembler< DIM >)BidomainRhsMatrixAssembler< DIM > [inline]


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