FixedDurationGenerationBasedCellCycleModelCellsGenerator< DIM > Class Template Reference

#include <FixedDurationGenerationBasedCellCycleModelCellsGenerator.hpp>

Inheritance diagram for FixedDurationGenerationBasedCellCycleModelCellsGenerator< DIM >:

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Collaboration diagram for FixedDurationGenerationBasedCellCycleModelCellsGenerator< DIM >:

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List of all members.

Public Member Functions
AbstractCellCycleModel *	CreateCellCycleModel ()
void	GenerateBasic (std::vector< TissueCell > &rCells, const unsigned numCells)
void	GenerateGivenLocationIndices (std::vector< TissueCell > &rCells, const std::vector< unsigned > locationIndices)
double	GetTypicalTransitCellCycleTime ()
double	GetTypicalStemCellCycleTime ()
bool	CellsCanDifferentiate ()

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Detailed Description

template<unsigned DIM>
class FixedDurationGenerationBasedCellCycleModelCellsGenerator< DIM >

A helper class for generating a vector of cells with FixedDurationGenerationBasedCellCycleModels for a given mesh.

Definition at line 39 of file FixedDurationGenerationBasedCellCycleModelCellsGenerator.hpp.

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Member Function Documentation

template<unsigned DIM>

AbstractCellCycleModel * FixedDurationGenerationBasedCellCycleModelCellsGenerator< DIM >::CreateCellCycleModel

(

)

[inline, virtual]

Returns:

a pointer to a new FixedDurationGenerationBasedCellCycleModel.

Implements AbstractCellsGenerator< DIM >.

Definition at line 32 of file FixedDurationGenerationBasedCellCycleModelCellsGenerator.cpp.

Referenced by FixedDurationGenerationBasedCellCycleModelCellsGenerator< DIM >::GenerateBasic(), and FixedDurationGenerationBasedCellCycleModelCellsGenerator< DIM >::GenerateGivenLocationIndices().

template<unsigned DIM>

void FixedDurationGenerationBasedCellCycleModelCellsGenerator< DIM >::GenerateBasic	(	std::vector< TissueCell > &	rCells,
		const unsigned	numCells
	)			[inline]

Fills a vector of cells with a specified cell cycle model, to match a given number of cells. Gives them birth times of 0 for node 0, -1 for node 1, -2 for node 2 etc...

Parameters:

	rCells	An empty vector of cells to fill up.
	numCells	The number of cells to generate.

Definition at line 62 of file FixedDurationGenerationBasedCellCycleModelCellsGenerator.cpp.

References FixedDurationGenerationBasedCellCycleModelCellsGenerator< DIM >::CreateCellCycleModel(), and TissueCell::SetBirthTime().

template<unsigned DIM>

void FixedDurationGenerationBasedCellCycleModelCellsGenerator< DIM >::GenerateGivenLocationIndices	(	std::vector< TissueCell > &	rCells,
		const std::vector< unsigned >	locationIndices
	)			[inline]

Fills a vector of cells with a specified cell cycle model, to match a given vector of location indices.

Parameters:

	rCells	An empty vector of cells to fill up.
	locationIndices	The indices of the tissue to assign real cells to.

Definition at line 80 of file FixedDurationGenerationBasedCellCycleModelCellsGenerator.cpp.

References FixedDurationGenerationBasedCellCycleModelCellsGenerator< DIM >::CreateCellCycleModel(), and TissueCell::SetBirthTime().

template<unsigned DIM>

double FixedDurationGenerationBasedCellCycleModelCellsGenerator< DIM >::GetTypicalTransitCellCycleTime

(

)

[inline, virtual]

Returns:

default cell cycle time for a transit cell.

Implements AbstractCellsGenerator< DIM >.

Definition at line 39 of file FixedDurationGenerationBasedCellCycleModelCellsGenerator.cpp.

References CancerParameters::GetSG2MDuration(), CancerParameters::GetTransitCellG1Duration(), and CancerParameters::Instance().

template<unsigned DIM>

double FixedDurationGenerationBasedCellCycleModelCellsGenerator< DIM >::GetTypicalStemCellCycleTime

(

)

[inline, virtual]

Returns:

default cell cycle time for a transit cell.

Implements AbstractCellsGenerator< DIM >.

Definition at line 47 of file FixedDurationGenerationBasedCellCycleModelCellsGenerator.cpp.

References CancerParameters::GetSG2MDuration(), CancerParameters::GetStemCellG1Duration(), and CancerParameters::Instance().

template<unsigned DIM>

bool FixedDurationGenerationBasedCellCycleModelCellsGenerator< DIM >::CellsCanDifferentiate

(

)

[inline, virtual]

Returns:

true (cells can always differentiate).

Reimplemented from AbstractCellsGenerator< DIM >.

Definition at line 55 of file FixedDurationGenerationBasedCellCycleModelCellsGenerator.cpp.

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The documentation for this class was generated from the following files:

• /tmp/release_1/cancer/src/tissue/cell/FixedDurationGenerationBasedCellCycleModelCellsGenerator.hpp
• /tmp/release_1/cancer/src/tissue/cell/FixedDurationGenerationBasedCellCycleModelCellsGenerator.cpp