MutableMesh< ELEMENT_DIM, SPACE_DIM > Member List

This is the complete list of members for MutableMesh< ELEMENT_DIM, SPACE_DIM >, including all inherited members.

AbstractMesh()AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
AbstractTetrahedralMesh()AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
AddNode(Node< SPACE_DIM > *pNewNode)MutableMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
boost::serialization::access classMutableMesh< ELEMENT_DIM, SPACE_DIM > [friend]
BoundaryElementIterator typedefAbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
BoundaryNodeIterator typedefAbstractMesh< ELEMENT_DIM, SPACE_DIM >
CalculateBoundaryOfFlaggedRegion()TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
CalculateBoundingBox() const AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
CalculateDesignatedOwnershipOfBoundaryElement(unsigned faceIndex)AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
CalculateDesignatedOwnershipOfElement(unsigned elementIndex)AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
CalculateMaximumContainingElementsPerProcess() const AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
CalculateMaximumNodeConnectivityPerProcess() const AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
CheckIsConforming()TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
CheckIsVoronoi(Element< ELEMENT_DIM, SPACE_DIM > *pElement, double maxPenetration)MutableMesh< ELEMENT_DIM, SPACE_DIM > [inline, private]
CheckIsVoronoi(double maxPenetration=0.0)MutableMesh< ELEMENT_DIM, SPACE_DIM > [inline]
Clear()MutableMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
ConstructCuboid(unsigned width, unsigned height, unsigned depth)AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
ConstructFromMesh(AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > &rOtherMesh)AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
ConstructFromMeshReader(AbstractMeshReader< ELEMENT_DIM, SPACE_DIM > &rMeshReader)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
ConstructLinearMesh(unsigned width)AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
ConstructRectangularMesh(unsigned width, unsigned height, bool stagger=true)AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
ConstructRegularSlabMesh(double spaceStep, double width, double height=0, double depth=0)AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
DeleteBoundaryNodeAt(unsigned index)MutableMesh< ELEMENT_DIM, SPACE_DIM > [inline]
DeleteNode(unsigned index)MutableMesh< ELEMENT_DIM, SPACE_DIM > [inline]
DeleteNodePriorToReMesh(unsigned index)MutableMesh< ELEMENT_DIM, SPACE_DIM > [inline]
EdgesBegin()TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
EdgesEnd()TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
ExportToMesher(NodeMap &map, MESHER_IO &mesherInput, int *elementList=NULL)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, protected]
FlagElementsNotContainingNodes(const std::set< unsigned > rNodes)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
FreeTriangulateIo(triangulateio &mesherIo)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, protected]
GetAngleBetweenNodes(unsigned indexA, unsigned indexB)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetBoundaryElement(unsigned index) const AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetBoundaryElementIteratorBegin() const AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetBoundaryElementIteratorEnd() const AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetBoundaryNodeIteratorBegin() const AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetBoundaryNodeIteratorEnd() const AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetContainingElementIndex(const ChastePoint< SPACE_DIM > &rTestPoint, bool strict=false, std::set< unsigned > testElements=std::set< unsigned >(), bool onlyTryWithTestElements=false)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetContainingElementIndexWithInitialGuess(const ChastePoint< SPACE_DIM > &rTestPoint, unsigned startingElementGuess, bool strict=false)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetContainingElementIndices(const ChastePoint< SPACE_DIM > &rTestPoint)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetDistanceBetweenNodes(unsigned indexA, unsigned indexB)AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetDistributedVectorFactory()AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetElement(unsigned index) const AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetElementIteratorBegin(bool skipDeletedElements=true)AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetElementIteratorEnd()AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetHaloNodeIndices(std::vector< unsigned > &rHaloIndices) const AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
GetInverseJacobianForElement(unsigned elementIndex, c_matrix< double, SPACE_DIM, ELEMENT_DIM > &rJacobian, double &rJacobianDeterminant, c_matrix< double, ELEMENT_DIM, SPACE_DIM > &rInverseJacobian) const TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
GetJacobianForElement(unsigned elementIndex, c_matrix< double, SPACE_DIM, SPACE_DIM > &rJacobian, double &rJacobianDeterminant) const TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
GetMeshFileBaseName() const AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetNearestElementIndex(const ChastePoint< SPACE_DIM > &rTestPoint)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetNearestElementIndexFromTestElements(const ChastePoint< SPACE_DIM > &rTestPoint, std::set< unsigned > testElements)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetNode(unsigned index) const AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetNodeFromPrePermutationIndex(unsigned index) const AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetNodeIteratorBegin(bool skipDeletedNodes=true)AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetNodeIteratorEnd()AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetNodeOrHaloNode(unsigned index) const AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
GetNumAllBoundaryElements() const AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetNumAllElements() const AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetNumAllNodes() const AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
GetNumBoundaryElements() const MutableMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
GetNumBoundaryNodes() const AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetNumElements() const MutableMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
GetNumLocalElements() const AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
GetNumNodes() const MutableMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
GetSurfaceArea()TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetVectorFromAtoB(const c_vector< double, SPACE_DIM > &rLocationA, const c_vector< double, SPACE_DIM > &rLocationB)AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
GetVolume()TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
GetWeightedDirectionForBoundaryElement(unsigned elementIndex, c_vector< double, SPACE_DIM > &rWeightedDirection, double &rJacobianDeterminant) const TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
GetWeightedDirectionForElement(unsigned elementIndex, c_vector< double, SPACE_DIM > &rWeightedDirection, double &rJacobianDeterminant) const TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
GetWidth(const unsigned &rDimension) const AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
ImportFromMesher(MESHER_IO &mesherOutput, unsigned numberOfElements, int *elementList, unsigned numberOfFaces, int *faceList, int *edgeMarkerList)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, protected]
InitialiseTriangulateIo(triangulateio &mesherIo)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, protected]
IsMeshChanging() const AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
mAddedNodesMutableMesh< ELEMENT_DIM, SPACE_DIM > [protected]
mBoundaryElementJacobianDeterminantsTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [protected]
mBoundaryElementsAbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [protected]
mBoundaryElementWeightedDirectionsTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [protected]
mBoundaryNodesAbstractMesh< ELEMENT_DIM, SPACE_DIM > [protected]
mDeletedBoundaryElementIndicesMutableMesh< ELEMENT_DIM, SPACE_DIM > [protected]
mDeletedElementIndicesMutableMesh< ELEMENT_DIM, SPACE_DIM > [protected]
mDeletedNodeIndicesMutableMesh< ELEMENT_DIM, SPACE_DIM > [protected]
mElementInverseJacobiansTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [protected]
mElementJacobianDeterminantsTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [protected]
mElementJacobiansTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [protected]
mElementsAbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [protected]
mElementWeightedDirectionsTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [protected]
mMeshChangesDuringSimulationAbstractMesh< ELEMENT_DIM, SPACE_DIM > [protected]
mMeshFileBaseNameAbstractMesh< ELEMENT_DIM, SPACE_DIM > [protected]
mMeshIsLinearAbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [protected]
mNodesAbstractMesh< ELEMENT_DIM, SPACE_DIM > [protected]
mNodesPermutationAbstractMesh< ELEMENT_DIM, SPACE_DIM > [protected]
MoveMergeNode(unsigned index, unsigned targetIndex, bool concreteMove=true)MutableMesh< ELEMENT_DIM, SPACE_DIM > [inline]
mpDistributedVectorFactoryAbstractMesh< ELEMENT_DIM, SPACE_DIM > [protected]
MutableMesh()MutableMesh< ELEMENT_DIM, SPACE_DIM > [inline]
MutableMesh(std::vector< Node< SPACE_DIM > * > nodes)MutableMesh< ELEMENT_DIM, SPACE_DIM > [inline]
PermuteNodes()TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
PermuteNodes(const std::vector< unsigned > &perm)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
ReadNodesPerProcessorFile(const std::string &rNodesPerProcessorFile)TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
RefineElement(Element< ELEMENT_DIM, SPACE_DIM > *pElement, ChastePoint< SPACE_DIM > point)MutableMesh< ELEMENT_DIM, SPACE_DIM > [inline]
RefreshJacobianCachedData()TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
RefreshMesh()TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
ReIndex(NodeMap &map)MutableMesh< ELEMENT_DIM, SPACE_DIM > [inline]
ReMesh(NodeMap &map)MutableMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
ReMesh()MutableMesh< ELEMENT_DIM, SPACE_DIM > [inline]
RescaleMeshFromBoundaryNode(ChastePoint< 1 > updatedPoint, unsigned boundaryNodeIndex)MutableMesh< ELEMENT_DIM, SPACE_DIM >
RescaleMeshFromBoundaryNode(ChastePoint< 1 > updatedPoint, unsigned boundaryNodeIndex)MutableMesh< ELEMENT_DIM, SPACE_DIM > [inline]
rGetNodePermutation() const AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
Rotate(c_matrix< double, SPACE_DIM, SPACE_DIM > rotationMatrix)AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
Rotate(c_vector< double, 3 > axis, double angle)AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
Rotate(double theta)AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
RotateX(const double theta)AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
RotateY(const double theta)AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
RotateZ(const double theta)AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
Scale(const double xFactor=1.0, const double yFactor=1.0, const double zFactor=1.0)AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
serialize(Archive &archive, const unsigned int version)MutableMesh< ELEMENT_DIM, SPACE_DIM > [inline, private]
SetDistributedVectorFactory(DistributedVectorFactory *pFactory)AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
SetElementOwnerships(unsigned lo, unsigned hi)AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
SetMeshHasChangedSinceLoading()AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
SetNode(unsigned index, ChastePoint< SPACE_DIM > point, bool concreteMove=true)MutableMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
SolveBoundaryElementMapping(unsigned index) const TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, protected, virtual]
SolveElementMapping(unsigned index) const TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, protected, virtual]
SolveNodeMapping(unsigned index) const TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, protected, virtual]
TetrahedralMesh()TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
Translate(const c_vector< double, SPACE_DIM > &rDisplacement)AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
Translate(const double xMovement=0.0, const double yMovement=0.0, const double zMovement=0.0)AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline]
UnflagAllElements()TetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline]
~AbstractMesh()AbstractMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
~AbstractTetrahedralMesh()AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]
~MutableMesh()MutableMesh< ELEMENT_DIM, SPACE_DIM > [inline, virtual]


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