TysonNovak2001OdeSystem Member List

This is the complete list of members for TysonNovak2001OdeSystem, including all inherited members.

AbstractOdeSystem(unsigned numberOfStateVariables)AbstractOdeSystem
AbstractOdeSystemWithAnalyticJacobian(unsigned numberOfStateVariables=0)AbstractOdeSystemWithAnalyticJacobian [inline]
AbstractParameterisedSystem(unsigned numberOfStateVariables)AbstractParameterisedSystem< std::vector< double > >
AnalyticJacobian(const std::vector< double > &rSolutionGuess, double **jacobian, double time, double timeStep)TysonNovak2001OdeSystem [virtual]
boost::serialization::access (defined in TysonNovak2001OdeSystem)TysonNovak2001OdeSystem [friend]
CalculateRootFunction(double time, const std::vector< double > &rY)TysonNovak2001OdeSystem [virtual]
CalculateStoppingEvent(double time, const std::vector< double > &rY)TysonNovak2001OdeSystem [virtual]
ComputeDerivedQuantities(double time, const std::vector< double > &rState)AbstractParameterisedSystem< std::vector< double > > [virtual]
ComputeDerivedQuantitiesFromCurrentState(double time)AbstractParameterisedSystem< std::vector< double > >
DumpState(const std::string &rMessage, std::vector< double > Y=std::vector< double >())AbstractOdeSystem [protected]
EvaluateYDerivatives(double time, const std::vector< double > &rY, std::vector< double > &rDY)TysonNovak2001OdeSystem [virtual]
GetAnyVariable(unsigned index, double time=0.0, std::vector< double > *pDerivedQuantities=NULL)AbstractParameterisedSystem< std::vector< double > >
GetAnyVariableIndex(const std::string &rName) const AbstractParameterisedSystem< std::vector< double > >
GetAnyVariableUnits(unsigned index) const AbstractParameterisedSystem< std::vector< double > >
GetDerivedQuantityIndex(const std::string &rName) const AbstractParameterisedSystem< std::vector< double > >
GetDerivedQuantityUnits(unsigned index) const AbstractParameterisedSystem< std::vector< double > >
GetInitialConditions() const AbstractOdeSystem
GetNumberOfDerivedQuantities() const AbstractParameterisedSystem< std::vector< double > >
GetNumberOfParameters() const AbstractParameterisedSystem< std::vector< double > >
GetNumberOfStateVariables() const AbstractParameterisedSystem< std::vector< double > >
GetParameter(unsigned index) const AbstractParameterisedSystem< std::vector< double > >
GetParameterIndex(const std::string &rName) const AbstractParameterisedSystem< std::vector< double > >
GetParameterUnits(unsigned index) const AbstractParameterisedSystem< std::vector< double > >
GetStateVariable(unsigned index) const AbstractParameterisedSystem< std::vector< double > >
GetStateVariableIndex(const std::string &rName) const AbstractParameterisedSystem< std::vector< double > >
GetStateVariableUnits(unsigned index) const AbstractParameterisedSystem< std::vector< double > >
GetSystemInformation() const AbstractParameterisedSystem< std::vector< double > >
GetSystemName() const AbstractParameterisedSystem< std::vector< double > >
GetUseAnalyticJacobian()AbstractOdeSystem
Init()TysonNovak2001OdeSystem
mCycB_thresholdTysonNovak2001OdeSystem [private]
mJ15TysonNovak2001OdeSystem [private]
mJ16TysonNovak2001OdeSystem [private]
mJ3TysonNovak2001OdeSystem [private]
mJ4TysonNovak2001OdeSystem [private]
mJ5TysonNovak2001OdeSystem [private]
mJ7TysonNovak2001OdeSystem [private]
mJ8TysonNovak2001OdeSystem [private]
mK1TysonNovak2001OdeSystem [private]
mK10TysonNovak2001OdeSystem [private]
mK11TysonNovak2001OdeSystem [private]
mK12dTysonNovak2001OdeSystem [private]
mK12ddTysonNovak2001OdeSystem [private]
mK12dddTysonNovak2001OdeSystem [private]
mK13TysonNovak2001OdeSystem [private]
mK14TysonNovak2001OdeSystem [private]
mK15dTysonNovak2001OdeSystem [private]
mK15ddTysonNovak2001OdeSystem [private]
mK16dTysonNovak2001OdeSystem [private]
mK16ddTysonNovak2001OdeSystem [private]
mK2dTysonNovak2001OdeSystem [private]
mK2ddTysonNovak2001OdeSystem [private]
mK2dddTysonNovak2001OdeSystem [private]
mK3dTysonNovak2001OdeSystem [private]
mK3ddTysonNovak2001OdeSystem [private]
mK4TysonNovak2001OdeSystem [private]
mK4dTysonNovak2001OdeSystem [private]
mK5dTysonNovak2001OdeSystem [private]
mK5ddTysonNovak2001OdeSystem [private]
mK6TysonNovak2001OdeSystem [private]
mK7TysonNovak2001OdeSystem [private]
mK8TysonNovak2001OdeSystem [private]
mK9TysonNovak2001OdeSystem [private]
mKeqTysonNovak2001OdeSystem [private]
mMadTysonNovak2001OdeSystem [private]
mMstarTysonNovak2001OdeSystem [private]
mMuTysonNovak2001OdeSystem [private]
mNTysonNovak2001OdeSystem [private]
mNumberOfStateVariablesAbstractParameterisedSystem< std::vector< double > > [protected]
mParametersAbstractParameterisedSystem< std::vector< double > > [protected]
mpSystemInfoAbstractParameterisedSystem< std::vector< double > > [protected]
mStateVariablesAbstractParameterisedSystem< std::vector< double > > [protected]
mUseAnalyticJacobianAbstractOdeSystem [protected]
rGetConstStateVariables() const AbstractOdeSystem
rGetDerivedQuantityNames() const AbstractParameterisedSystem< std::vector< double > >
rGetDerivedQuantityUnits() const AbstractParameterisedSystem< std::vector< double > >
rGetParameterNames() const AbstractParameterisedSystem< std::vector< double > >
rGetParameterUnits() const AbstractParameterisedSystem< std::vector< double > >
rGetStateVariableNames() const AbstractParameterisedSystem< std::vector< double > >
rGetStateVariables()AbstractParameterisedSystem< std::vector< double > >
rGetStateVariableUnits() const AbstractParameterisedSystem< std::vector< double > >
serialize(Archive &archive, const unsigned int version)TysonNovak2001OdeSystem [inline, private]
SetDefaultInitialCondition(unsigned index, double initialCondition)AbstractOdeSystem
SetDefaultInitialConditions(const std::vector< double > &rInitialConditions)AbstractOdeSystem
SetParameter(const std::string &rName, double value)AbstractParameterisedSystem< std::vector< double > >
SetParameter(unsigned index, double value)AbstractParameterisedSystem< std::vector< double > >
SetStateVariable(unsigned index, double newValue)AbstractParameterisedSystem< std::vector< double > >
SetStateVariables(const std::vector< double > &rStateVariables)AbstractOdeSystem
TysonNovak2001OdeSystem(std::vector< double > stateVariables=std::vector< double >())TysonNovak2001OdeSystem
~AbstractOdeSystem()AbstractOdeSystem [virtual]
~AbstractParameterisedSystem()AbstractParameterisedSystem< std::vector< double > > [virtual]
~TysonNovak2001OdeSystem()TysonNovak2001OdeSystem


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