, including all inherited members.
| AbstractCardiacFeObjectAssembler(AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh, AbstractCardiacTissue< ELEMENT_DIM, SPACE_DIM > *pTissue, unsigned numQuadPoints) | AbstractCardiacFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, 2, true, true, CARDIAC > | [inline] |
| AbstractCardiacFeObjectAssembler(AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh, AbstractCardiacTissue< ELEMENT_DIM, SPACE_DIM > *pTissue) | AbstractCardiacFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, 2, true, true, CARDIAC > | [inline] |
| AbstractFeObjectAssembler(AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh, unsigned numQuadPoints=2) | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline] |
| ApplyNeummanBoundaryConditionsToVector() | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline, protected] |
| Assemble() | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline] |
| AssembleMatrix() | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline] |
| AssembleOnElement(Element< ELEMENT_DIM, SPACE_DIM > &rElement, c_matrix< double, PROBLEM_DIM *(ELEMENT_DIM+1), PROBLEM_DIM *(ELEMENT_DIM+1) > &rAElem, c_vector< double, PROBLEM_DIM *(ELEMENT_DIM+1)> &rBElem) | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline, protected, virtual] |
| AssembleOnSurfaceElement(const BoundaryElement< ELEMENT_DIM-1, SPACE_DIM > &rSurfaceElement, c_vector< double, PROBLEM_DIM *ELEMENT_DIM > &rBSurfElem) | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline, protected, virtual] |
| AssembleVector() | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline] |
| BasisFunction typedef | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [protected] |
| BidomainAssembler(AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh, BidomainTissue< SPACE_DIM > *pTissue, unsigned numQuadPoints=2) | BidomainAssembler< ELEMENT_DIM, SPACE_DIM > | [inline] |
| BidomainWithBathAssembler(AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > *pMesh, BidomainTissue< SPACE_DIM > *pTissue, unsigned numQuadPoints=2) | BidomainWithBathAssembler< ELEMENT_DIM, SPACE_DIM > | [inline] |
| ComputeMatrixTerm(c_vector< double, ELEMENT_DIM+1 > &rPhi, c_matrix< double, SPACE_DIM, ELEMENT_DIM+1 > &rGradPhi, ChastePoint< SPACE_DIM > &rX, c_vector< double, 2 > &rU, c_matrix< double, 2, SPACE_DIM > &rGradU, Element< ELEMENT_DIM, SPACE_DIM > *pElement) | BidomainWithBathAssembler< ELEMENT_DIM, SPACE_DIM > | [inline, protected, virtual] |
| AbstractCardiacFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, 2, true, true, CARDIAC >::ComputeMatrixTerm(c_vector< double, ELEMENT_DIM+1 > &rPhi, c_matrix< double, SPACE_DIM, ELEMENT_DIM+1 > &rGradPhi, ChastePoint< SPACE_DIM > &rX, c_vector< double, PROBLEM_DIM > &rU, c_matrix< double, PROBLEM_DIM, SPACE_DIM > &rGradU, Element< ELEMENT_DIM, SPACE_DIM > *pElement) | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline, protected, virtual] |
| ComputeTransformedBasisFunctionDerivatives(const ChastePoint< ELEMENT_DIM > &rPoint, const c_matrix< double, ELEMENT_DIM, SPACE_DIM > &rInverseJacobian, c_matrix< double, SPACE_DIM, ELEMENT_DIM+1 > &rReturnValue) | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline, protected] |
| ComputeVectorSurfaceTerm(const BoundaryElement< ELEMENT_DIM-1, SPACE_DIM > &rSurfaceElement, c_vector< double, ELEMENT_DIM > &rPhi, ChastePoint< SPACE_DIM > &rX) | BidomainAssembler< ELEMENT_DIM, SPACE_DIM > | [inline, protected, virtual] |
| ComputeVectorTerm(c_vector< double, ELEMENT_DIM+1 > &rPhi, c_matrix< double, SPACE_DIM, ELEMENT_DIM+1 > &rGradPhi, ChastePoint< SPACE_DIM > &rX, c_vector< double, 2 > &u, c_matrix< double, 2, SPACE_DIM > &rGradU, Element< ELEMENT_DIM, SPACE_DIM > *pElement) | BidomainWithBathAssembler< ELEMENT_DIM, SPACE_DIM > | [inline, protected, virtual] |
| AbstractCardiacFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, 2, true, true, CARDIAC >::ComputeVectorTerm(c_vector< double, ELEMENT_DIM+1 > &rPhi, c_matrix< double, SPACE_DIM, ELEMENT_DIM+1 > &rGradPhi, ChastePoint< SPACE_DIM > &rX, c_vector< double, PROBLEM_DIM > &rU, c_matrix< double, PROBLEM_DIM, SPACE_DIM > &rGradU, Element< ELEMENT_DIM, SPACE_DIM > *pElement) | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline, protected, virtual] |
| DoAssemble() | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline, protected] |
| ElementAssemblyCriterion(Element< ELEMENT_DIM, SPACE_DIM > &rElement) | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline, protected, virtual] |
| GetCurrentSolutionOrGuessValue(unsigned nodeIndex, unsigned indexOfUnknown) | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline, protected, virtual] |
| IncrementInterpolatedQuantities(double phiI, const Node< SPACE_DIM > *pNode) | BidomainAssembler< ELEMENT_DIM, SPACE_DIM > | [inline, protected, virtual] |
| mApplyNeummanBoundaryConditionsToVector | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [protected] |
| mAssembleMatrix | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [protected] |
| mAssembleVector | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [protected] |
| mCurrentSolutionOrGuessReplicated | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [protected] |
| mIExtracellularStimulus | BidomainAssembler< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mIIntracellularStimulus | BidomainAssembler< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mIionic | BidomainAssembler< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mMatrixToAssemble | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [protected] |
| mOnlyAssembleOnSurfaceElements | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [protected] |
| mOwnershipRangeHi | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [protected] |
| mOwnershipRangeLo | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [protected] |
| mpBoundaryConditions | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [protected] |
| mpCardiacTissue | AbstractCardiacFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, 2, true, true, CARDIAC > | [protected] |
| mpConfig | BidomainAssembler< ELEMENT_DIM, SPACE_DIM > | [protected] |
| mpMesh | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [protected] |
| mpQuadRule | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [protected] |
| mpSurfaceQuadRule | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [protected] |
| mVectorToAssemble | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [protected] |
| mZeroVectorBeforeAssembly | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [protected] |
| OnlyAssembleOnSurfaceElements(bool onlyAssembleOnSurfaceElements=true) | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline] |
| ResetInterpolatedQuantities() | BidomainAssembler< ELEMENT_DIM, SPACE_DIM > | [inline, protected, virtual] |
| SetApplyNeummanBoundaryConditionsToVector(BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > *pBcc) | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline] |
| SetCurrentSolution(Vec currentSolution) | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline] |
| SetMatrixToAssemble(Mat &rMatToAssemble) | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline] |
| SetVectorToAssemble(Vec &rVecToAssemble, bool zeroVectorBeforeAssembly) | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline] |
| SurfaceBasisFunction typedef | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [protected] |
| ~AbstractFeObjectAssembler() | AbstractFeObjectAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL > | [inline, virtual] |
| ~BidomainAssembler() | BidomainAssembler< ELEMENT_DIM, SPACE_DIM > | [inline] |
| ~BidomainWithBathAssembler() | BidomainWithBathAssembler< ELEMENT_DIM, SPACE_DIM > | [inline] |