AbstractCellBasedSimulationModifier.hpp

/*

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*/

#ifndef ABSTRACTCELLBASEDSIMULATIONMODIFIER_HPP_
#define ABSTRACTCELLBASEDSIMULATIONMODIFIER_HPP_

#include "ChasteSerialization.hpp"
#include "ClassIsAbstract.hpp"

#include "AbstractCellPopulation.hpp"

template<unsigned  ELEMENT_DIM, unsigned SPACE_DIM=ELEMENT_DIM>
class AbstractCellBasedSimulationModifier : public Identifiable
{
    friend class boost::serialization::access;
    template<class Archive>
    void serialize(Archive & archive, const unsigned int version)
    {
    }

public:

    AbstractCellBasedSimulationModifier();

    virtual ~AbstractCellBasedSimulationModifier();

    virtual void UpdateAtEndOfTimeStep(AbstractCellPopulation<ELEMENT_DIM,SPACE_DIM>& rCellPopulation)=0;

    virtual void UpdateAtEndOfOutputTimeStep(AbstractCellPopulation<ELEMENT_DIM,SPACE_DIM>& rCellPopulation)
    {
    }

    virtual void SetupSolve(AbstractCellPopulation<ELEMENT_DIM,SPACE_DIM>& rCellPopulation, std::string outputDirectory)=0;

    virtual void UpdateAtEndOfSolve(AbstractCellPopulation<ELEMENT_DIM,SPACE_DIM>& rCellPopulation)
    {
    }

    void OutputSimulationModifierInfo(out_stream& rParamsFile);

    virtual void OutputSimulationModifierParameters(out_stream& rParamsFile)=0;
};

TEMPLATED_CLASS_IS_ABSTRACT_2_UNSIGNED(AbstractCellBasedSimulationModifier)

#endif /*ABSTRACTCELLBASEDSIMULATIONMODIFIER_HPP_*/