CellProperties.hpp

/*

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*/

#ifndef _CELLPROPERTIES_HPP_
#define _CELLPROPERTIES_HPP_

#include <vector>

class CellProperties
{
private:
    const std::vector<double>& mrVoltage;
    const std::vector<double>& mrTime;

    bool mUnfinishedActionPotentials;

    double mThreshold;

    std::vector<double> mOnsets;

    std::vector<double> mRestingValues;

    std::vector<double> mCycleLengths;

    std::vector<double> mPeakValues;

    std::vector<double> mTimesAtPeakValues;

    std::vector<double> mMaxUpstrokeVelocities;

    std::vector<double> mTimesAtMaxUpstrokeVelocity;

    std::vector<unsigned> mCounterOfPlateauDepolarisations;

    void CalculateProperties();

    std::vector<double> CalculateActionPotentialDurations(const double percentage);

    void CheckExceededThreshold(void);

    void CheckReturnedToThreshold(void);

public:
    CellProperties(const std::vector<double>& rVoltage,
                   const std::vector<double>& rTime,
                   double threshold = -30.0)
            : mrVoltage(rVoltage),
              mrTime(rTime),
              mUnfinishedActionPotentials(false),
              mThreshold(threshold)
    {
        CalculateProperties();
    }

    std::vector<double> GetMaxUpstrokeVelocities();

    double GetLastMaxUpstrokeVelocity();

    double GetLastCompleteMaxUpstrokeVelocity();

    std::vector<double> GetTimesAtMaxUpstrokeVelocity();

    double GetTimeAtLastMaxUpstrokeVelocity();

    double GetTimeAtLastCompleteMaxUpstrokeVelocity();

    std::vector<double> GetCycleLengths();

    std::vector<double> GetPeakPotentials();

    std::vector<double> GetTimesAtPeakPotentials();

    double GetTimeAtLastPeakPotential();

    double GetLastPeakPotential();

    double GetLastCompletePeakPotential();

    double GetTimeAtLastCompletePeakPotential();

    std::vector<double> GetRestingPotentials();

    double GetLastRestingPotential();

    std::vector<double> GetAllActionPotentialDurations(const double percentage);

    double GetLastActionPotentialDuration(const double percentage);

    std::vector<double> GetActionPotentialAmplitudes();

    double GetLastActionPotentialAmplitude();

    std::vector<unsigned> GetNumberOfAboveThresholdDepolarisationsForAllAps();

    unsigned GetNumberOfAboveThresholdDepolarisationsForLastAp();
};

#endif //_CELLPROPERTIES_HPP_