Chaste  Release::2018.1
AbstractCardiacMechanicsSolverInterface.hpp
1 /*
2 
3 Copyright (c) 2005-2018, University of Oxford.
4 All rights reserved.
5 
6 University of Oxford means the Chancellor, Masters and Scholars of the
7 University of Oxford, having an administrative office at Wellington
8 Square, Oxford OX1 2JD, UK.
9 
10 This file is part of Chaste.
11 
12 Redistribution and use in source and binary forms, with or without
13 modification, are permitted provided that the following conditions are met:
14  * Redistributions of source code must retain the above copyright notice,
15  this list of conditions and the following disclaimer.
16  * Redistributions in binary form must reproduce the above copyright notice,
17  this list of conditions and the following disclaimer in the documentation
18  and/or other materials provided with the distribution.
19  * Neither the name of the University of Oxford nor the names of its
20  contributors may be used to endorse or promote products derived from this
21  software without specific prior written permission.
22 
23 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
24 AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
25 IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
26 ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE
27 LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
28 CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE
29 GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
30 HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
31 LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT
32 OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
33 
34 */
35 
36 
37 #ifndef ABSTRACTCARDIACMECHANICSSOLVERINTERFACE_HPP_
38 #define ABSTRACTCARDIACMECHANICSSOLVERINTERFACE_HPP_
39 
40 #include "AbstractNonlinearElasticitySolver.hpp"
41 
42 
54 template<unsigned DIM>
56 {
57 public:
60  {
61  }
62 
65  {
66  }
67 
69  virtual unsigned GetTotalNumQuadPoints()=0;
70 
73 
79  virtual void Initialise() = 0;
80 
88  virtual void SetFineCoarseMeshPair(FineCoarseMeshPair<DIM>* pMeshPair) = 0;
89 
96  virtual void SetConstantFibreSheetDirections(const c_matrix<double,DIM,DIM>& rFibreSheetMatrix)=0;
97 
109  virtual void SetVariableFibreSheetDirections(const FileFinder& rOrthoFile, bool definedPerQuadraturePoint)=0;
110 
111 
124  virtual void SetCalciumAndVoltage(std::vector<double>& rCalciumConcentrations,
125  std::vector<double>& rVoltages)=0;
126 
134  virtual void Solve(double time, double nextTime, double odeTimestep)=0;
135 
155  virtual void ComputeDeformationGradientAndStretchInEachElement(std::vector<c_matrix<double,DIM,DIM> >& rDeformationGradients,
156  std::vector<double>& rStretches)=0;
157 };
158 
159 #endif /* ABSTRACTCARDIACMECHANICSSOLVERINTERFACE_HPP_ */
virtual void SetCalciumAndVoltage(std::vector< double > &rCalciumConcentrations, std::vector< double > &rVoltages)=0
virtual void SetVariableFibreSheetDirections(const FileFinder &rOrthoFile, bool definedPerQuadraturePoint)=0
virtual void SetConstantFibreSheetDirections(const c_matrix< double, DIM, DIM > &rFibreSheetMatrix)=0
virtual GaussianQuadratureRule< DIM > * GetQuadratureRule()=0
virtual void SetFineCoarseMeshPair(FineCoarseMeshPair< DIM > *pMeshPair)=0
virtual void ComputeDeformationGradientAndStretchInEachElement(std::vector< c_matrix< double, DIM, DIM > > &rDeformationGradients, std::vector< double > &rStretches)=0
virtual void Solve(double time, double nextTime, double odeTimestep)=0
virtual unsigned GetTotalNumQuadPoints()=0