AbstractSrnModel.cpp

/*

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*/

#include "AbstractSrnModel.hpp"

AbstractSrnModel::AbstractSrnModel()
    : mSimulatedToTime(SimulationTime::Instance()->GetTime())
{
}

AbstractSrnModel::~AbstractSrnModel()
{
}

void AbstractSrnModel::Initialise()
{
}

void AbstractSrnModel::InitialiseDaughterCell()
{
}

AbstractSrnModel::AbstractSrnModel(const AbstractSrnModel& rModel)
    : mSimulatedToTime(rModel.GetSimulatedToTime())
{
    /*
     * Set each member variable of the new SRN model that inherits
     * its value from the parent.
     *
     * Note 1: some of the new SRN model's member variables
     * will already have been correctly initialized in its constructor.
     *
     * Note 2: one or more of the new SRN model's member variables
     * may be set/overwritten as soon as InitialiseDaughterCell() is called on
     * the new SRN model.
     *
     * Note 3: Only set the variables defined in this class. Variables defined
     * in parent classes will be defined there.
     */
}

void AbstractSrnModel::ResetForDivision()
{
    // Make sure we're at the current time
    SimulateToCurrentTime();
    assert(mSimulatedToTime == SimulationTime::Instance()->GetTime());
}

void AbstractSrnModel::SetCell(CellPtr pCell)
{
    mpCell = pCell;
}

CellPtr AbstractSrnModel::GetCell()
{
    assert(mpCell != nullptr);
    return mpCell;
}

void AbstractSrnModel::SetSimulatedToTime(double simulatedToTime)
{
    mSimulatedToTime = simulatedToTime;
}

double AbstractSrnModel::GetSimulatedToTime() const
{
    return mSimulatedToTime;
}

/*
void AbstractSrnModel::SimulateToCurrentTime()
{
    // This should be overridden
    SetSimulatedToTime(SimulationTime::Instance()->GetTime());
}
*/

void AbstractSrnModel::OutputSrnModelInfo(out_stream& rParamsFile)
{
    std::string srn_model_type = GetIdentifier();

    *rParamsFile << "\t\t<" << srn_model_type << ">\n";
    OutputSrnModelParameters(rParamsFile);
    *rParamsFile << "\t\t</" << srn_model_type << ">\n";
}

void AbstractSrnModel::OutputSrnModelParameters(out_stream& rParamsFile)
{
}