#include <BoundaryNodeWriter.hpp>

Inheritance diagram for BoundaryNodeWriter< ELEMENT_DIM, SPACE_DIM >:

Collaboration diagram for BoundaryNodeWriter< ELEMENT_DIM, SPACE_DIM >:

Public Member Functions
	BoundaryNodeWriter ()

void	VisitAnyPopulation (AbstractCellPopulation< SPACE_DIM, SPACE_DIM > *pCellPopulation)

virtual void	Visit (MeshBasedCellPopulation< ELEMENT_DIM, SPACE_DIM > *pCellPopulation)

virtual void	Visit (CaBasedCellPopulation< SPACE_DIM > *pCellPopulation)

virtual void	Visit (NodeBasedCellPopulation< SPACE_DIM > *pCellPopulation)

virtual void	Visit (PottsBasedCellPopulation< SPACE_DIM > *pCellPopulation)

virtual void	Visit (VertexBasedCellPopulation< SPACE_DIM > *pCellPopulation)

Public Member Functions inherited from AbstractCellPopulationWriter< ELEMENT_DIM, SPACE_DIM >
	AbstractCellPopulationWriter (const std::string &rFileName)

virtual void	WriteHeader (AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM > *pCellPopulation)

Public Member Functions inherited from AbstractCellBasedWriter< ELEMENT_DIM, SPACE_DIM >
	AbstractCellBasedWriter (const std::string &rFileName)

virtual	~AbstractCellBasedWriter ()

void	CloseFile ()

virtual void	OpenOutputFile (OutputFileHandler &rOutputFileHandler)

void	OpenOutputFileForAppend (OutputFileHandler &rOutputFileHandler)

virtual void	WriteTimeStamp ()

virtual void	WriteNewline ()

void	SetFileName (std::string fileName)

std::string	GetFileName ()

Public Member Functions inherited from Identifiable
virtual	~Identifiable ()

std::string	GetIdentifier () const

Private Member Functions
template<class Archive >
void	serialize (Archive &archive, const unsigned int version)

Friends
class	boost::serialization::access

Additional Inherited Members
Protected Attributes inherited from AbstractCellBasedWriter< ELEMENT_DIM, SPACE_DIM >
std::string	mFileName

out_stream	mpOutStream

Detailed Description

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
class BoundaryNodeWriter< ELEMENT_DIM, SPACE_DIM >

A class written using the visitor pattern for writing the boundary nodes of a population to file.

The output file is called results.vizboundarynodes by default.

Definition at line 49 of file BoundaryNodeWriter.hpp.

Constructor & Destructor Documentation

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

BoundaryNodeWriter< ELEMENT_DIM, SPACE_DIM >::BoundaryNodeWriter ( )

Default constructor.

Definition at line 45 of file BoundaryNodeWriter.cpp.

Member Function Documentation

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

template<class Archive >

void BoundaryNodeWriter< ELEMENT_DIM, SPACE_DIM >::serialize	(	Archive &	archive,
		const unsigned int	version
	)

inlineprivate

Serialize the object and its member variables.

Parameters

archive	the archive
version	the current version of this class

Definition at line 61 of file BoundaryNodeWriter.hpp.

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void BoundaryNodeWriter< ELEMENT_DIM, SPACE_DIM >::Visit ( MeshBasedCellPopulation< ELEMENT_DIM, SPACE_DIM > * pCellPopulation )

virtual

Visit the population and write whether each node is a boundary node.

Outputs a line of space-separated values of the form: [node 0 is boundary node] [node 1 is boundary node] ...

where [node 0 is boundary node] is 1 if node 0 is a boundary node and 0 if it is not, and so on. Here the indexing of nodes is as given by the NodeIterator.

This line is appended to the output written by AbstractCellBasedWriter, which is a single value [present simulation time], followed by a tab.

Parameters

pCellPopulation a pointer to the MeshBasedCellPopulation to visit.

Implements AbstractCellPopulationWriter< ELEMENT_DIM, SPACE_DIM >.

Definition at line 65 of file BoundaryNodeWriter.cpp.

References MeshBasedCellPopulation< ELEMENT_DIM, SPACE_DIM >::rGetMesh().

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void BoundaryNodeWriter< ELEMENT_DIM, SPACE_DIM >::Visit ( CaBasedCellPopulation< SPACE_DIM > * pCellPopulation )

virtual

Visit the population and write whether each node is a boundary node.

Outputs a line of space-separated values of the form: [node 0 is boundary node] [node 1 is boundary node] ...

where [node 0 is boundary node] is 1 if node 0 is a boundary node and 0 if it is not, and so on. Here the indexing of nodes is as given by the NodeIterator.

This line is appended to the output written by AbstractCellBasedWriter, which is a single value [present simulation time], followed by a tab.

Parameters

pCellPopulation a pointer to the CaBasedCellPopulation to visit.

Implements AbstractCellPopulationWriter< ELEMENT_DIM, SPACE_DIM >.

Definition at line 79 of file BoundaryNodeWriter.cpp.

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void BoundaryNodeWriter< ELEMENT_DIM, SPACE_DIM >::Visit ( NodeBasedCellPopulation< SPACE_DIM > * pCellPopulation )

virtual

Visit the population and write whether each node is a boundary node.

Outputs a line of space-separated values of the form: [node 0 is boundary node] [node 1 is boundary node] ...

where [node 0 is boundary node] is 1 if node 0 is a boundary node and 0 if it is not, and so on. Here the indexing of nodes is as given by the NodeIterator.

This line is appended to the output written by AbstractCellBasedWriter, which is a single value [present simulation time], followed by a tab.

Parameters

pCellPopulation a pointer to the NodeBasedCellPopulation to visit.

Implements AbstractCellPopulationWriter< ELEMENT_DIM, SPACE_DIM >.

Definition at line 85 of file BoundaryNodeWriter.cpp.

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void BoundaryNodeWriter< ELEMENT_DIM, SPACE_DIM >::Visit ( PottsBasedCellPopulation< SPACE_DIM > * pCellPopulation )

virtual

Visit the population and write whether each node is a boundary node.

Outputs a line of space-separated values of the form: [node 0 is boundary node] [node 1 is boundary node] ...

where [node 0 is boundary node] is 1 if node 0 is a boundary node and 0 if it is not, and so on. Here the indexing of nodes is as given by the NodeIterator.

This line is appended to the output written by AbstractCellBasedWriter, which is a single value [present simulation time], followed by a tab.

Parameters

pCellPopulation a pointer to the PottsBasedCellPopulation to visit.

Implements AbstractCellPopulationWriter< ELEMENT_DIM, SPACE_DIM >.

Definition at line 91 of file BoundaryNodeWriter.cpp.

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void BoundaryNodeWriter< ELEMENT_DIM, SPACE_DIM >::Visit ( VertexBasedCellPopulation< SPACE_DIM > * pCellPopulation )

virtual

Visit the population and write whether each node is a boundary node.

Outputs a line of space-separated values of the form: [node 0 is boundary node] [node 1 is boundary node] ...

where [node 0 is boundary node] is 1 if node 0 is a boundary node and 0 if it is not, and so on. Here the indexing of nodes is as given by the NodeIterator.

This line is appended to the output written by AbstractCellBasedWriter, which is a single value [present simulation time], followed by a tab.

Parameters

pCellPopulation a pointer to the VertexBasedCellPopulation to visit.

Implements AbstractCellPopulationWriter< ELEMENT_DIM, SPACE_DIM >.

Definition at line 97 of file BoundaryNodeWriter.cpp.

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

void BoundaryNodeWriter< ELEMENT_DIM, SPACE_DIM >::VisitAnyPopulation ( AbstractCellPopulation< SPACE_DIM, SPACE_DIM > * pCellPopulation )

Visit the population and write the data.

Parameters

pCellPopulation a pointer to the population to visit.

Definition at line 51 of file BoundaryNodeWriter.cpp.

References AbstractCellPopulation< ELEMENT_DIM, SPACE_DIM >::rGetMesh().

Friends And Related Function Documentation

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>

friend class boost::serialization::access

friend

Needed for serialization.

Definition at line 53 of file BoundaryNodeWriter.hpp.

The documentation for this class was generated from the following files:

cell_based/src/writers/population_writers/BoundaryNodeWriter.hpp
cell_based/src/writers/population_writers/BoundaryNodeWriter.cpp

Public Member Functions

Private Member Functions

Friends

Additional Inherited Members

Detailed Description

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM> class BoundaryNodeWriter< ELEMENT_DIM, SPACE_DIM >

Constructor & Destructor Documentation

Member Function Documentation

Friends And Related Function Documentation

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM>
class BoundaryNodeWriter< ELEMENT_DIM, SPACE_DIM >