AdvectionCaUpdateRule.hpp

00001 /*
00002 
00003 Copyright (C) University of Oxford, 2005-2011
00004 
00005 University of Oxford means the Chancellor, Masters and Scholars of the
00006 University of Oxford, having an administrative office at Wellington
00007 Square, Oxford OX1 2JD, UK.
00008 
00009 This file is part of Chaste.
00010 
00011 Chaste is free software: you can redistribute it and/or modify it
00012 under the terms of the GNU Lesser General Public License as published
00013 by the Free Software Foundation, either version 2.1 of the License, or
00014 (at your option) any later version.
00015 
00016 Chaste is distributed in the hope that it will be useful, but WITHOUT
00017 ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
00018 FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public
00019 License for more details. The offer of Chaste under the terms of the
00020 License is subject to the License being interpreted in accordance with
00021 English Law and subject to any action against the University of Oxford
00022 being under the jurisdiction of the English Courts.
00023 
00024 You should have received a copy of the GNU Lesser General Public License
00025 along with Chaste. If not, see <http://www.gnu.org/licenses/>.
00026 
00027 */
00028 
00029 #ifndef ADVECTIONCAUPDATERULE_HPP_
00030 #define ADVECTIONCAUPDATERULE_HPP_
00031 
00032 #include "ChasteSerialization.hpp"
00033 #include <boost/serialization/base_object.hpp>
00034 
00035 #include "AbstractCaUpdateRule.hpp"
00036 #include "CaBasedCellPopulation.hpp"
00037 
00051 template<unsigned DIM>
00052 class AdvectionCaUpdateRule : public AbstractCaUpdateRule<DIM>
00053 {
00054 private:
00055 
00061     unsigned mAdvectionDirection;
00062 
00066     double mAdvectionSpeed;
00067 
00069     friend class boost::serialization::access;
00076     template<class Archive>
00077     void serialize(Archive & archive, const unsigned int version)
00078     {
00079         archive & boost::serialization::base_object<AbstractCaUpdateRule<DIM> >(*this);
00080         archive & mAdvectionDirection;
00081         archive & mAdvectionSpeed;
00082     }
00083 
00084 public:
00085 
00092     AdvectionCaUpdateRule(unsigned advectionDirection, double advectionSpeed);
00093 
00097     AdvectionCaUpdateRule();
00098 
00102     ~AdvectionCaUpdateRule();
00103 
00114     unsigned GetNewLocationOfCell(unsigned currentLocationIndex,
00115                                   CaBasedCellPopulation<DIM>& rCellPopulation,
00116                                   double dt);
00117 
00121     unsigned GetAdvectionDirection();
00122 
00126     double GetAdvectionSpeed();
00127 
00133     void OutputUpdateRuleParameters(out_stream& rParamsFile);
00134 };
00135 
00136 #include "SerializationExportWrapper.hpp"
00137 EXPORT_TEMPLATE_CLASS_SAME_DIMS(AdvectionCaUpdateRule)
00138 
00139 #endif /*ADVECTIONCAUPDATERULE_HPP_*/
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