Class List

Here are the classes, structs, unions and interfaces with brief descriptions:
AbstractAlgebraicContractionModel
AbstractAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, INTERPOLATION_LEVEL >
AbstractBackwardEulerCardiacCell< SIZE >
AbstractBidomainSolver< ELEMENT_DIM, SPACE_DIM >
AbstractBoundaryCondition< SPACE_DIM >
AbstractBoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
AbstractCachedMeshReader< ELEMENT_DIM, SPACE_DIM >
AbstractCardiacCell
AbstractCardiacCellFactory< ELEMENT_DIM, SPACE_DIM >
AbstractCardiacCellInterface
AbstractCardiacCellWithModifiers< CARDIAC_CELL >
AbstractCardiacFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL >
AbstractCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >
AbstractCardiacMechanicsSolverInterface< DIM >
AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
AbstractCardiacTissue< ELEMENT_DIM, SPACE_DIM >
AbstractCaUpdateRule< DIM >
AbstractCellBasedSimulation< DIM >
AbstractCellBasedTestSuite
AbstractCellCycleModel
AbstractCellCycleModelOdeSolver
AbstractCellKiller< SPACE_DIM >
AbstractCellMutationState
AbstractCellPopulation< DIM >
AbstractCellPopulation< DIM >::Iterator
AbstractCellPopulationBoundaryCondition< DIM >
AbstractCellProperty
AbstractCentreBasedCellPopulation< DIM >
AbstractChasteRegion< SPACE_DIM >
AbstractCompressibleMaterialLaw< DIM >
AbstractConductivityModifier< ELEMENT_DIM, SPACE_DIM >
AbstractConductivityTensors< ELEMENT_DIM, SPACE_DIM >
AbstractContinuumMechanicsAssembler< DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX >
AbstractContractionModel
AbstractConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
AbstractCorrectionTermAssembler< ELEM_DIM, SPACE_DIM, PROBLEM_DIM >
AbstractCryptStatistics
AbstractCvodeCell
AbstractCvodeSystem
AbstractDataReader
AbstractDataWriter
AbstractDynamicallyLoadableEntity
AbstractDynamicLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
AbstractElement< ELEMENT_DIM, SPACE_DIM >
AbstractExtendedBidomainSolver< ELEMENT_DIM, SPACE_DIM >
AbstractFeAssemblerCommon< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL >
AbstractFeAssemblerInterface< CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX >
AbstractFeCableIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL >
AbstractFeSurfaceIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
AbstractFeVolumeIntegralAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM, CAN_ASSEMBLE_VECTOR, CAN_ASSEMBLE_MATRIX, INTERPOLATION_LEVEL >
AbstractForce< DIM >
AbstractFunctionalCalculator< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
AbstractHdf5Converter< ELEMENT_DIM, SPACE_DIM >
AbstractIncompressibleMaterialLaw< DIM >
AbstractIsotropicCompressibleMaterialLaw< DIM >
AbstractIsotropicIncompressibleMaterialLaw< DIM >
AbstractIvpOdeSolver
AbstractLinearEllipticPde< ELEMENT_DIM, SPACE_DIM >
AbstractLinearParabolicPde< ELEMENT_DIM, SPACE_DIM >
AbstractLinearParabolicPdeSystemForCoupledOdeSystem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
AbstractLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
AbstractLookupTableCollection
AbstractLookupTableCollection::EventHandler
AbstractMaterialLaw< DIM >
AbstractMesh< ELEMENT_DIM, SPACE_DIM >
AbstractMesh< ELEMENT_DIM, SPACE_DIM >::NodeIterator
AbstractMeshReader< ELEMENT_DIM, SPACE_DIM >
AbstractMeshWriter< ELEMENT_DIM, SPACE_DIM >
AbstractModifier
AbstractNonlinearAssemblerSolverHybrid< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
AbstractNonlinearElasticitySolver< DIM >
AbstractNonlinearEllipticPde< SPACE_DIM >
AbstractNonlinearSolver
AbstractOdeBasedCellCycleModel
AbstractOdeBasedContractionModel
AbstractOdeSystem
AbstractOdeSystemForCoupledPdeSystem
AbstractOdeSystemInformation
AbstractOdeSystemWithAnalyticJacobian
AbstractOffLatticeCellPopulation< DIM >
AbstractOneStepIvpOdeSolver
AbstractOnLatticeCellPopulation< DIM >
AbstractParameterisedSystem< VECTOR >
AbstractPottsUpdateRule< DIM >
AbstractPurkinjeCellFactory< ELEMENT_DIM, SPACE_DIM >
AbstractRushLarsenCardiacCell
AbstractSimpleCellCycleModel
AbstractSimpleGenerationBasedCellCycleModel
AbstractStaticLinearPdeSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
AbstractStimulusFactory< ELEMENT_DIM, SPACE_DIM >
AbstractStimulusFunction
AbstractTetrahedralElement< ELEMENT_DIM, SPACE_DIM >
AbstractTetrahedralElement< 0, SPACE_DIM >
AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::ElementIterator
AbstractTetrahedralMeshWriter< ELEMENT_DIM, SPACE_DIM >
AbstractTimeAdaptivityController
AbstractTwoBodyInteractionForce< DIM >
AbstractUntemplatedCardiacProblem
AbstractUntemplatedConvergenceTester
AbstractUntemplatedParameterisedSystem
AbstractVanLeeuwen2009WntSwatCellCycleModel
AbstractWntOdeBasedCellCycleModel
AdaptiveBidomainProblem
AdaptiveTetrahedralMesh
AdhesionPottsUpdateRule< DIM >
AdvectionCaUpdateRule< DIM >
Alarcon2004OxygenBasedCellCycleModel
Alarcon2004OxygenBasedCellCycleOdeSystem
ApcOneHitCellMutationState
ApcTwoHitCellMutationState
ApoptoticCellProperty
ArchiveLocationInfo
ArchiveOpener< Archive, Stream >
AveragedSourcePde< DIM >
AxisymmetricConductivityTensors< ELEMENT_DIM, SPACE_DIM >
BackwardEulerIvpOdeSolver
badsubseg
badtriang
BathCellFactory< DIM, CELLTYPE >
behavior
BetaCateninOneHitCellMutationState
BidomainAssembler< ELEMENT_DIM, SPACE_DIM >
BidomainCorrectionTermAssembler< ELEM_DIM, SPACE_DIM >
BidomainMassMatrixAssembler< DIM >
BidomainNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM >
BidomainProblem< DIM >
BidomainSolver< ELEMENT_DIM, SPACE_DIM >
BidomainTissue< SPACE_DIM >
BidomainWithBathAssembler< ELEMENT_DIM, SPACE_DIM >
BidomainWithBathProblem< DIM >
enable_shared_from_this
noncopyable
boost::serialization::version< AbstractCardiacProblem< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM > >
boost::serialization::version< AbstractCardiacTissue< ELEMENT_DIM, SPACE_DIM > >
boost::serialization::version< AbstractChasteRegion< SPACE_DIM > >
boost::serialization::version< AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM > >
BoundaryConditionsContainer< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
BoundaryElement< ELEMENT_DIM, SPACE_DIM >
Box< DIM >
BoxCollection< DIM >
BuskeAdhesiveForce< DIM >
BuskeCompressionForce< DIM >
BuskeElasticForce< DIM >
CaBasedCellPopulation< DIM >
CARDIAC_CELL
CardiacElectroMechanicsProblem< DIM >
CardiacElectroMechProbRegularGeom< DIM >
CardiacNewtonSolver< SIZE, CELLTYPE >
CardiacSimulation
CardiacSimulationArchiver< PROBLEM_CLASS >
Cell
CellBasedEventHandler
CellBasedPdeHandler< DIM >
CellBasedPdeSolver< DIM >
CellBasedSimulationArchiver< DIM, SIM >
CellCycleModelOdeHandler
CellCycleModelOdeSolver< CELL_CYCLE_MODEL, ODE_SOLVER >
CellCycleModelOdeSolver< CELL_CYCLE_MODEL, BackwardEulerIvpOdeSolver >
CellLabel
CellMLToSharedLibraryConverter
CellProperties
CellPropertyCollection
CellPropertyRegistry
CellsGenerator< CELL_CYCLE_MODEL, DIM >
CellwiseData< DIM >
CellwiseDataGradient< DIM >
CellwiseOdeSystemInformation< ODE_SYSTEM >
CellwiseSourcePde< DIM >
ChasteBuildInfo
ChasteCuboid< SPACE_DIM >
ChasteEllipsoid< SPACE_DIM >
ChasteNodesList< SPACE_DIM >
ChastePoint< DIM >
ChastePoint< 0 >
ChemotacticForce< DIM >
ChemotaxisPottsUpdateRule< DIM >
CmguiDeformedSolutionsWriter< DIM >
CmguiMeshWriter< ELEMENT_DIM, SPACE_DIM >
CML_noble_varghese_kohl_noble_1998_basic_with_sac
ColumnDataReader
ColumnDataWriter
CombinedOdeSystem
CombinedOdeSystem::VariableParameterMap
CombinedOdeSystemInformation
CombinedOdeSystemInformation::InstancePointers
CommandLineArguments
CompareDoubles
CompressibleExponentialLaw< DIM >
CompressibleMooneyRivlinMaterialLaw< DIM >
CompressibleNonlinearElasticitySolver< DIM >
ConstBoundaryCondition< SPACE_DIM >
ContactInhibitionCellCycleModel
ContinuumMechanicsProblemDefinition< DIM >
ContractionModelInputParameters_
CorriasBuistICCModified
CorriasBuistSMCModified
CryptCellsGenerator< CELL_CYCLE_MODEL >
CryptProjectionForce
CryptProjectionStatistics
CryptSimulation1d
CryptSimulation2d
CryptSimulationBoundaryCondition< DIM >
CryptStatistics
CuboidMeshConstructor< ELEMENT_DIM, SPACE_DIM >
CvodeAdaptor
CvodeData_
GlobalFixture
TestSuite
Cylindrical2dMesh
Cylindrical2dVertexMesh
CylindricalHoneycombMeshGenerator
CylindricalHoneycombVertexMeshGenerator
DataWriterVariable
DeformedBoundaryElement< ELEM_DIM, SPACE_DIM >
DeltaNotchCellCycleModel
DeltaNotchOdeSystem
DeltaNotchOffLatticeSimulation< DIM >
DifferentialAdhesionPottsUpdateRule< DIM >
DiffusionCaUpdateRule< DIM >
DiscreteSystemForceCalculator
DistanceMapCalculator< ELEMENT_DIM, SPACE_DIM >
DistributedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
DistributedTetrahedralMeshPartitionType
DistributedVector
DistributedVector::Chunk
DistributedVector::Iterator
DistributedVector::Stripe
DistributedVectorException
DistributedVectorFactory
DummyModifier
DynamicCellModelLoader
DynamicModelLoaderRegistry
DynamicRestitutionStimulus
ELASTICITY_SOLVER
Electrodes< DIM >
ElectrodesStimulusFactory< DIM >
ElectroMechanicsProblemDefinition< DIM >
Element< ELEMENT_DIM, SPACE_DIM >
ElementAndWeights< DIM >
ElementData
EulerIvpOdeSolver
event
Exception
ExecutableSupport
ExplicitCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >
ExponentialMaterialLaw< DIM >
ExtendedBidomainAssembler< ELEMENT_DIM, SPACE_DIM >
ExtendedBidomainMassMatrixAssembler< DIM >
ExtendedBidomainNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM >
ExtendedBidomainProblem< DIM >
ExtendedBidomainSolver< ELEM_DIM, SPACE_DIM >
ExtendedBidomainTissue< SPACE_DIM >
FactorModifier
FakeBathCell
FemlabMeshReader< ELEMENT_DIM, SPACE_DIM >
FibreReader< DIM >
FibreWriter< DIM >
FileFinder
FineCoarseMeshPair< DIM >
FitzHughNagumo1961OdeSystem
FixedDurationGenerationBasedCellCycleModel
FixedModifier
flipstacker
FourthOrderTensor< DIM1, DIM2, DIM3, DIM4 >
FunctionalBoundaryCondition< SPACE_DIM >
GaussianQuadratureRule< ELEMENT_DIM >
GeneralisedLinearSpringForce< DIM >
GeneralPlaneStimulusCellFactory< CELL, ELEMENT_DIM, SPACE_DIM >
GenericEventHandler< NUM_EVENTS, CONCRETE >
Hdf5DataReader
Hdf5DataWriter
Hdf5ToCmguiConverter< ELEMENT_DIM, SPACE_DIM >
Hdf5ToMeshalyzerConverter< ELEMENT_DIM, SPACE_DIM >
Hdf5ToTxtConverter< ELEMENT_DIM, SPACE_DIM >
Hdf5ToVtkConverter< ELEMENT_DIM, SPACE_DIM >
HeartConfig
HeartConfigRelatedCellFactory< SPACE_DIM >
HeartEventHandler
HeartFileFinder
HeartGeometryInformation< SPACE_DIM >
HeartRegionCode
HeunIvpOdeSolver
HoneycombMeshGenerator
HoneycombVertexMeshGenerator
Identifiable
ImplicitCardiacMechanicsSolver< ELASTICITY_SOLVER, DIM >
IncompressibleNonlinearElasticitySolver< DIM >
Kerchoffs2003ContractionModel
LessThanNode< SPACE_DIM >
LinearBasisFunction< ELEMENT_DIM >
LinearBasisFunction< 0 >
LinearParabolicPdeSystemWithCoupledOdeSystemSolver< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
LinearSpringWithVariableSpringConstantsForce< DIM >
LinearSystem
LogFile
MassMatrixAssembler< ELEMENT_DIM, SPACE_DIM >
MechanicsEventHandler
MemfemMeshReader< ELEMENT_DIM, SPACE_DIM >
memorypool
mesh
MeshalyzerMeshWriter< ELEMENT_DIM, SPACE_DIM >
MeshBasedCellPopulation< DIM >
MeshBasedCellPopulation< DIM >::SpringIterator
MeshBasedCellPopulationWithGhostNodes< DIM >
MeshPottsWriterIterators< SPACE_DIM >
MeshWriterIterators< ELEMENT_DIM, SPACE_DIM >
Mirams2010WntOdeSystem
MixedDimensionMesh< ELEMENT_DIM, SPACE_DIM >
MockEulerIvpOdeSolver
MonodomainAssembler< ELEMENT_DIM, SPACE_DIM >
MonodomainCorrectionTermAssembler< ELEM_DIM, SPACE_DIM >
MonodomainProblem< ELEMENT_DIM, SPACE_DIM >
MonodomainSolver< ELEMENT_DIM, SPACE_DIM >
MonodomainStiffnessMatrixAssembler< ELEMENT_DIM, SPACE_DIM >
MonodomainTissue< ELEMENT_DIM, SPACE_DIM >
MooneyRivlinMaterialLaw< DIM >
MultiStimulus
MutableMesh< ELEMENT_DIM, SPACE_DIM >
MutableVertexMesh< ELEMENT_DIM, SPACE_DIM >
NagaiHondaForce< DIM >
Nash2004ContractionModel
NashHunterPoleZeroLaw< DIM >
NaturalNeumannSurfaceTermAssembler< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
NhsContractionModel
NhsModelWithBackwardSolver
Node< SPACE_DIM >
Node< SPACE_DIM >::ContainingBoundaryElementIterator
Node< SPACE_DIM >::ContainingElementIterator
NodeBasedCellPopulation< DIM >
NodeBasedCellPopulationWithBuskeUpdate< DIM >
NodeMap
NodesOnlyMesh< SPACE_DIM >
NonCachedTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
NonlinearElasticityTools< DIM >
NonPhysiologicalContractionModel
null_deleter
NumericFileComparison
OdeConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
OdeLinearSystemSolver
OdePdeConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
OdeSolution
OdeSystemForCoupledHeatEquation
OdeSystemForCoupledHeatEquationWithSource
OdeSystemInformation< ODE_SYSTEM >
OffLatticeSimulation< DIM >
OnLatticeSimulation< DIM >
OperatorSplittingMonodomainSolver< ELEMENT_DIM, SPACE_DIM >
OrthotropicConductivityTensors< ELEMENT_DIM, SPACE_DIM >
osub
otri
OutputDirectoryFifoQueue
OutputFileHandler
OxygenBasedCellKiller< SPACE_DIM >
pack< void(T)>
PapillaryFibreCalculator
ParallelColumnDataWriter
PCBlockDiagonal
PCBlockDiagonal::PCBlockDiagonalContext
PCLDUFactorisation
PCLDUFactorisation::PCLDUFactorisationContext
PCTwoLevelsBlockDiagonal
PCTwoLevelsBlockDiagonal::PCTwoLevelsBlockDiagonalContext
PdeAndBoundaryConditions< DIM >
PdeConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
PdeSimulationTime
PetscMatTools
PetscSetup
PetscTools
PetscVecTools
PlaneBasedCellKiller< DIM >
PlaneBoundaryCondition< DIM >
PlaneStimulusCellFactory< CELL, ELEMENT_DIM, SPACE_DIM >
PoleZeroMaterialLaw< DIM >
PolynomialMaterialLaw3d
PostProcessingWriter< ELEMENT_DIM, SPACE_DIM >
PottsBasedCellPopulation< DIM >
PottsElement< DIM >
PottsElementData
PottsMesh< DIM >
PottsMesh< DIM >::PottsElementIterator
PottsMeshGenerator< DIM >
PottsMeshReader< SPACE_DIM >
PottsMeshWriter< SPACE_DIM >
ProcessSpecificArchive< Archive >
ProgressReporter
PropagationPropertiesCalculator
PseudoEcgCalculator< ELEMENT_DIM, SPACE_DIM, PROBLEM_DIM >
QuadraticBasisFunction< ELEMENT_DIM >
QuadraticBasisFunction< 0 >
QuadraticMesh< DIM >
QuadraturePointsGroup< DIM >
RadialSloughingCellKiller
RampedQuarterStimulusCellFactory< CELL, DIM >
RandomCellKiller< DIM >
RandomNumberGenerator
RegularStimulus
RegularStimulusZeroNetCharge
RelativeTo
ReplicatableVector
RepulsionForce< DIM >
RungeKutta2IvpOdeSolver
RungeKutta4IvpOdeSolver
RungeKuttaFehlbergIvpOdeSolver
S1S2Stimulus
SchmidCostaExponentialLaw2d
SerializableSingleton< SINGLETON_CLASS >
SimpleDataWriter
SimpleLinearEllipticSolver< ELEMENT_DIM, SPACE_DIM >
SimpleLinearParabolicSolver< ELEMENT_DIM, SPACE_DIM >
SimpleNewtonNonlinearSolver
SimpleNonlinearEllipticSolver< ELEMENT_DIM, SPACE_DIM >
SimpleOxygenBasedCellCycleModel
SimplePetscNonlinearSolver
SimpleStimulus
SimpleUniformSourcePde< DIM >
SimpleWntCellCycleModel
SimulationTime
SingleOdeWntCellCycleModel
SloughingCellKiller< DIM >
SolidMechanicsProblemDefinition< DIM >
SpaceConvergenceTester< CELL, CARDIAC_PROBLEM, DIM, PROBLEM_DIM >
SphereGeometryBoundaryCondition< DIM >
splaynode
StiffnessMatrixAssembler< ELEMENT_DIM, SPACE_DIM >
StimulusBoundaryCondition< SPACE_DIM >
StochasticDurationCellCycleModel
StochasticDurationGenerationBasedCellCycleModel
StochasticOxygenBasedCellCycleModel
StochasticWntCellCycleModel
StokesFlowProblemDefinition< DIM >
StreeterFibreGenerator< SPACE_DIM >
SurfaceAreaConstraintPottsUpdateRule< DIM >
TargetedCellKiller< DIM >
TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >
TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::EdgeIterator
TimeModifier
Timer
TimeStepper
TrianglesMeshReader< ELEMENT_DIM, SPACE_DIM >
TrianglesMeshWriter< ELEMENT_DIM, SPACE_DIM >
TysonNovak2001OdeSystem
TysonNovakCellCycleModel
VanLeeuwen2009WntSwatCellCycleModelHypothesisOne
VanLeeuwen2009WntSwatCellCycleModelHypothesisTwo
VanLeeuwen2009WntSwatCellCycleOdeSystem
VertexBasedCellPopulation< DIM >
VertexCryptBoundaryForce< DIM >
VertexElement< ELEMENT_DIM, SPACE_DIM >
VertexElement< 1, SPACE_DIM >
VertexElementData
VertexElementMap
VertexMesh< ELEMENT_DIM, SPACE_DIM >
VertexMesh< ELEMENT_DIM, SPACE_DIM >::VertexElementIterator
VertexMeshReader< ELEMENT_DIM, SPACE_DIM >
VertexMeshWriter< ELEMENT_DIM, SPACE_DIM >
VoltageInterpolaterOntoMechanicsMesh< DIM >
VolumeConstraintPottsUpdateRule< DIM >
VolumeDependentAveragedSourcePde< DIM >
VolumeTrackedOffLatticeSimulation< DIM >
VtkMeshReader< ELEMENT_DIM, SPACE_DIM >
VtkMeshWriter< ELEMENT_DIM, SPACE_DIM >
Warnings
WelikyOsterForce< DIM >
WildTypeCellMutationState
WntCellCycleModel
WntCellCycleOdeSystem
WntConcentration< DIM >
XmlTools
XmlTools::Finalizer
XmlTransforms
ZeroNetChargeElectrodes< DIM >
ZeroStimulus
ZeroStimulusCellFactory< CELL, DIM >
Generated on Thu Dec 22 13:00:23 2011 for Chaste by  doxygen 1.6.3