VolumeDependentAveragedSourcePde< DIM > Class Template Reference

#include <VolumeDependentAveragedSourcePde.hpp>

Inherits AveragedSourcePde< DIM >.

Collaboration diagram for VolumeDependentAveragedSourcePde< DIM >:

[legend]

List of all members.

Public Member Functions
	VolumeDependentAveragedSourcePde (AbstractCellPopulation< DIM > &rCellPopulation, double coefficient=0.0)
void	SetupSourceTerms (TetrahedralMesh< DIM, DIM > &rCoarseMesh, std::map< CellPtr, unsigned > *pCellPdeElementMap=NULL)
Private Member Functions
template<class Archive >
void	serialize (Archive &archive, const unsigned int version)
Private Attributes
NodeBasedCellPopulation< DIM > *	mpStaticCastCellPopulation
Friends
class	TestCellBasedPdes
class	boost::serialization::access

---

Detailed Description

template<unsigned DIM>
class VolumeDependentAveragedSourcePde< DIM >

A PDE which calculates the source term by adding the number of cells in the element containing that point and scaling by the element area.

Definition at line 45 of file VolumeDependentAveragedSourcePde.hpp.

---

Constructor & Destructor Documentation

template<unsigned DIM>

VolumeDependentAveragedSourcePde< DIM >::VolumeDependentAveragedSourcePde	(	AbstractCellPopulation< DIM > &	rCellPopulation,
		double	coefficient = 0.0
	)			[inline]

Constructor.

Parameters:

	rCellPopulation	reference to the cell population
	coefficient	the coefficient of consumption of nutrient by cells (defaults to 0.0)

Definition at line 33 of file VolumeDependentAveragedSourcePde.cpp.

References VolumeDependentAveragedSourcePde< DIM >::mpStaticCastCellPopulation, and AveragedSourcePde< DIM >::mrCellPopulation.

---

Member Function Documentation

template<unsigned DIM>

template<class Archive >

void VolumeDependentAveragedSourcePde< DIM >::serialize	(	Archive &	archive,
		const unsigned int	version
	)			[inline, private]

Serialize the PDE and its member variables.

Parameters:

	archive	the archive
	version	the current version of this class

Reimplemented from AveragedSourcePde< DIM >.

Definition at line 60 of file VolumeDependentAveragedSourcePde.hpp.

template<unsigned DIM>

void VolumeDependentAveragedSourcePde< DIM >::SetupSourceTerms	(	TetrahedralMesh< DIM, DIM > &	rCoarseMesh,
		std::map< CellPtr, unsigned > *	pCellPdeElementMap = NULL
	)			[inline, virtual]

Set up the source terms.

Parameters:

	rCoarseMesh	reference to the coarse mesh
	pCellPdeElementMap	optional pointer to the map from cells to coarse elements

Reimplemented from AveragedSourcePde< DIM >.

Definition at line 41 of file VolumeDependentAveragedSourcePde.cpp.

References TetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::GetContainingElementIndex(), AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::GetElement(), AbstractTetrahedralMesh< ELEMENT_DIM, SPACE_DIM >::GetNumElements(), AveragedSourcePde< DIM >::mCellDensityOnCoarseElements, VolumeDependentAveragedSourcePde< DIM >::mpStaticCastCellPopulation, and AveragedSourcePde< DIM >::mrCellPopulation.

---

Friends And Related Function Documentation

template<unsigned DIM>

friend class boost::serialization::access [friend]

Needed for serialization.

Reimplemented from AveragedSourcePde< DIM >.

Definition at line 52 of file VolumeDependentAveragedSourcePde.hpp.

---

Member Data Documentation

template<unsigned DIM>

NodeBasedCellPopulation<DIM>* VolumeDependentAveragedSourcePde< DIM >::mpStaticCastCellPopulation [private]

Static cast of the NodeBasedCellPopulation.

Definition at line 66 of file VolumeDependentAveragedSourcePde.hpp.

Referenced by VolumeDependentAveragedSourcePde< DIM >::SetupSourceTerms(), and VolumeDependentAveragedSourcePde< DIM >::VolumeDependentAveragedSourcePde().

---

The documentation for this class was generated from the following files:

• cell_based/src/population/pdes/VolumeDependentAveragedSourcePde.hpp
• cell_based/src/population/pdes/VolumeDependentAveragedSourcePde.cpp