AbstractCardiacCellFactory.hpp

/*

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*/


#ifndef ABSTRACTCARDIACCELLFACTORY_HPP_
#define ABSTRACTCARDIACCELLFACTORY_HPP_

#include <boost/shared_ptr.hpp>

#include "AbstractCardiacCellInterface.hpp"
#include "AbstractTetrahedralMesh.hpp"
#include "AbstractIvpOdeSolver.hpp"
#include "EulerIvpOdeSolver.hpp"
#include "HeartGeometryInformation.hpp"
#include "HeartRegionCodes.hpp"
#include "ZeroStimulus.hpp"

template<unsigned ELEMENT_DIM, unsigned SPACE_DIM = ELEMENT_DIM>
class AbstractCardiacCellFactory
{
private:
    AbstractTetrahedralMesh<ELEMENT_DIM,SPACE_DIM>* mpMesh;

    HeartGeometryInformation<SPACE_DIM>* mpHeartGeometryInformation;

protected:
    boost::shared_ptr<ZeroStimulus> mpZeroStimulus;
    boost::shared_ptr<AbstractIvpOdeSolver> mpSolver;

public:
    virtual AbstractCardiacCellInterface* CreateCardiacCellForNode(unsigned nodeIndex);

    virtual AbstractCardiacCellInterface* CreateCardiacCellForTissueNode(unsigned nodeIndex)=0;

    virtual void FinaliseCellCreation(std::vector< AbstractCardiacCellInterface* >* pCellsDistributed,
                                      unsigned lo, unsigned hi);

    virtual void FillInCellularTransmuralAreas();

    virtual unsigned GetNumberOfCells();

    AbstractCardiacCellFactory(boost::shared_ptr<AbstractIvpOdeSolver> pSolver = boost::shared_ptr<AbstractIvpOdeSolver>(new EulerIvpOdeSolver));
    virtual ~AbstractCardiacCellFactory();

    virtual void SetMesh(AbstractTetrahedralMesh<ELEMENT_DIM,SPACE_DIM>* pMesh);

    AbstractTetrahedralMesh<ELEMENT_DIM,SPACE_DIM>* GetMesh();

    void SetHeartGeometryInformation(HeartGeometryInformation<SPACE_DIM>* pHeartGeometryInformation);

    HeartGeometryInformation<SPACE_DIM>* GetHeartGeometryInformation();

};

#endif /*ABSTRACTCARDIACCELLFACTORY_HPP_*/