Chaste Release::3.1
AbstractCellKiller.hpp
00001 /*
00002 
00003 Copyright (c) 2005-2012, University of Oxford.
00004 All rights reserved.
00005 
00006 University of Oxford means the Chancellor, Masters and Scholars of the
00007 University of Oxford, having an administrative office at Wellington
00008 Square, Oxford OX1 2JD, UK.
00009 
00010 This file is part of Chaste.
00011 
00012 Redistribution and use in source and binary forms, with or without
00013 modification, are permitted provided that the following conditions are met:
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00015    this list of conditions and the following disclaimer.
00016  * Redistributions in binary form must reproduce the above copyright notice,
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00022 
00023 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
00024 AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
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00034 */
00035 
00036 #ifndef ABSTRACTCELLKILLER_HPP_
00037 #define ABSTRACTCELLKILLER_HPP_
00038 
00039 #include "AbstractCellPopulation.hpp"
00040 
00041 #include "ChasteSerialization.hpp"
00042 #include "ClassIsAbstract.hpp"
00043 #include "Identifiable.hpp"
00044 
00048 template<unsigned SPACE_DIM>
00049 class AbstractCellKiller : public Identifiable
00050 {
00051 private:
00053     friend class boost::serialization::access;
00060     template<class Archive>
00061     void serialize(Archive & archive, const unsigned int version)
00062     {
00063         // Archiving of mpCellPopulation is implemented in load_construct_data of subclasses
00064     }
00065 
00066 protected:
00067 
00069     AbstractCellPopulation<SPACE_DIM>* mpCellPopulation;
00070 
00071 public:
00072 
00078     AbstractCellKiller(AbstractCellPopulation<SPACE_DIM>* pCellPopulation);
00079 
00083     virtual ~AbstractCellKiller();
00084 
00090     virtual void CheckAndLabelCellsForApoptosisOrDeath()=0;
00091 
00097     const AbstractCellPopulation<SPACE_DIM>* GetCellPopulation() const;
00098 
00105     void OutputCellKillerInfo(out_stream& rParamsFile);
00106 
00115     virtual void OutputCellKillerParameters(out_stream& rParamsFile)=0;
00116 };
00117 
00118 TEMPLATED_CLASS_IS_ABSTRACT_1_UNSIGNED(AbstractCellKiller)
00119 
00120 #endif /*ABSTRACTCELLKILLER_HPP_*/