Chaste Release::3.1
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00001 /* 00002 00003 Copyright (c) 2005-2012, University of Oxford. 00004 All rights reserved. 00005 00006 University of Oxford means the Chancellor, Masters and Scholars of the 00007 University of Oxford, having an administrative office at Wellington 00008 Square, Oxford OX1 2JD, UK. 00009 00010 This file is part of Chaste. 00011 00012 Redistribution and use in source and binary forms, with or without 00013 modification, are permitted provided that the following conditions are met: 00014 * Redistributions of source code must retain the above copyright notice, 00015 this list of conditions and the following disclaimer. 00016 * Redistributions in binary form must reproduce the above copyright notice, 00017 this list of conditions and the following disclaimer in the documentation 00018 and/or other materials provided with the distribution. 00019 * Neither the name of the University of Oxford nor the names of its 00020 contributors may be used to endorse or promote products derived from this 00021 software without specific prior written permission. 00022 00023 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 00024 AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 00025 IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 00026 ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE 00027 LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR 00028 CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE 00029 GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) 00030 HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT 00031 LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT 00032 OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. 00033 00034 */ 00035 #ifndef _ABSTRACTLINEARPARABOLICPDE_HPP_ 00036 #define _ABSTRACTLINEARPARABOLICPDE_HPP_ 00037 00038 #include "UblasCustomFunctions.hpp" 00039 #include "ChastePoint.hpp" 00040 #include "Node.hpp" 00041 #include "Element.hpp" 00042 #include <petscvec.h> 00043 00044 00052 template<unsigned ELEMENT_DIM, unsigned SPACE_DIM = ELEMENT_DIM> 00053 class AbstractLinearParabolicPde 00054 { 00055 public: 00056 00062 virtual double ComputeDuDtCoefficientFunction(const ChastePoint<SPACE_DIM>& rX)=0; 00063 00070 virtual double ComputeSourceTerm(const ChastePoint<SPACE_DIM>& rX, double u)=0; 00071 00078 virtual double ComputeSourceTermAtNode(const Node<SPACE_DIM>& rNode, double u); 00079 00080 00088 virtual c_matrix<double, SPACE_DIM, SPACE_DIM> ComputeDiffusionTerm(const ChastePoint<SPACE_DIM>& rX, Element<ELEMENT_DIM,SPACE_DIM>* pElement=NULL)=0; 00092 virtual ~AbstractLinearParabolicPde() 00093 {} 00094 }; 00095 00096 00098 // Implementation 00100 00101 00102 00103 template<unsigned ELEMENT_DIM, unsigned SPACE_DIM> 00104 double AbstractLinearParabolicPde<ELEMENT_DIM, SPACE_DIM>::ComputeSourceTermAtNode(const Node<SPACE_DIM>& rNode, double u) 00105 { 00106 return ComputeSourceTerm(rNode.GetPoint(), u); 00107 } 00108 00109 #endif //_ABSTRACTLINEARPARABOLICPDE_HPP_