Chaste Release::3.1
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00001 /* 00002 00003 Copyright (c) 2005-2012, University of Oxford. 00004 All rights reserved. 00005 00006 University of Oxford means the Chancellor, Masters and Scholars of the 00007 University of Oxford, having an administrative office at Wellington 00008 Square, Oxford OX1 2JD, UK. 00009 00010 This file is part of Chaste. 00011 00012 Redistribution and use in source and binary forms, with or without 00013 modification, are permitted provided that the following conditions are met: 00014 * Redistributions of source code must retain the above copyright notice, 00015 this list of conditions and the following disclaimer. 00016 * Redistributions in binary form must reproduce the above copyright notice, 00017 this list of conditions and the following disclaimer in the documentation 00018 and/or other materials provided with the distribution. 00019 * Neither the name of the University of Oxford nor the names of its 00020 contributors may be used to endorse or promote products derived from this 00021 software without specific prior written permission. 00022 00023 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" 00024 AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE 00025 IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE 00026 ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE 00027 LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR 00028 CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE 00029 GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) 00030 HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT 00031 LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT 00032 OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. 00033 00034 */ 00035 00036 #ifndef ABSTRACTSIMPLEGENERATIONBASEDCYCLEMODEL_HPP_ 00037 #define ABSTRACTSIMPLEGENERATIONBASEDCYCLEMODEL_HPP_ 00038 00039 #include "ChasteSerialization.hpp" 00040 #include "ClassIsAbstract.hpp" 00041 #include <boost/serialization/base_object.hpp> 00042 00043 #include "AbstractSimpleCellCycleModel.hpp" 00044 00054 class AbstractSimpleGenerationBasedCellCycleModel : public AbstractSimpleCellCycleModel 00055 { 00056 private: 00057 00059 friend class boost::serialization::access; 00066 template<class Archive> 00067 void serialize(Archive & archive, const unsigned int version) 00068 { 00069 archive & boost::serialization::base_object<AbstractSimpleCellCycleModel>(*this); 00070 archive & mGeneration; 00071 archive & mMaxTransitGenerations; 00072 } 00073 00074 protected: 00075 00077 unsigned mGeneration; 00078 00080 unsigned mMaxTransitGenerations; 00081 00082 public: 00083 00087 AbstractSimpleGenerationBasedCellCycleModel(); 00088 00092 virtual ~AbstractSimpleGenerationBasedCellCycleModel(); 00093 00095 void ResetForDivision(); 00096 00101 void InitialiseDaughterCell(); 00102 00108 void SetGeneration(unsigned generation); 00109 00113 unsigned GetGeneration() const; 00114 00120 void SetMaxTransitGenerations(unsigned maxTransitGenerations); 00121 00125 unsigned GetMaxTransitGenerations() const; 00126 00132 virtual void OutputCellCycleModelParameters(out_stream& rParamsFile); 00133 }; 00134 00135 CLASS_IS_ABSTRACT(AbstractSimpleGenerationBasedCellCycleModel) 00136 00137 #endif /*ABSTRACTSIMPLEGENERATIONBASEDCYCLEMODEL_HPP_*/